Search results for "Raphanus"

showing 10 items of 33 documents

Characterization and phylogenetic analysis of a cDNA encoding the Fes/FER related, non-receptor protein-tyrosine kinase in the marine sponge Sycon ra…

1998

Abstract In search of ancient versions of phylogenetically conserved genes/proteins, which are typical for multicellular animals, we have decided to analyse marine sponges (Porifera), the most ancient and most primitive metazoan organisms. We report here the complete nucleotide sequence of Sycon raphanus cDNA coding for a 879 aa long protein (100 kDa), which displays high overall similarity in primary structure and organization of domains with non-receptor tyrosine kinases (TKs) from the Fes/FER family. The encoded protein, which we named Fes/FER_SR, has a highly conserved, 260 aa long tyrosine kinase domain at the C-terminus. Amino-terminal to the catalytic domain is an 85 aa long SH2 doma…

DNA Complementaryanimal structuresMolecular Sequence DataBiologySH2 domainHomology (biology)PhylogeneticsProto-Oncogene ProteinsComplementary DNAGeneticsAnimalsAmino Acid SequenceSycon raphanusPhylogenyGeneticsSequence Homology Amino AcidProtein primary structureNucleic acid sequenceSequence Analysis DNAGeneral MedicineProtein-Tyrosine Kinasesbiology.organism_classificationPoriferaBiochemistryOncogenes; Signal transduction; SH2 domain; Metazoa; Porifera; PhylogenySequence AlignmentTyrosine kinaseGene
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Cloning of Hsp70 genes from the marine sponges Sycon raphanus (Calcarea) and Rhabdocalyptus dawsoni (Hexactinellida). An approach to solve the phylog…

1997

The phylogenetic relationships among the three classes of the Porifera—Demospongiae, Calcarea and Hexactinellida—are still unresolved, despite the use of molecular analyses of rRNA. To determine whether phylogenetic resolution of these classes is possible based on genes coding for specific proteins, in the present study the genes for the 70 kDa heat shock protein [Hsp70] were isolated fromRhabdocalyptus dawsoni[Hexactinellida] and fromSycon raphanus[Calcarea], and compared to that previously isolated from the demospongeGeodia cydonium. The gene fromR. dawsoniis 2021 bp long and encodes a predicted Hsp70 of Mr77,697; the protein comprises the characteristic sites of eukaryotic, cytoplasmic H…

GeneticsSpongePhylogenetic treePhylogeneticsComplementary DNAMolecular phylogeneticsSycon raphanusBiologyRibosomal RNAbiology.organism_classificationGeneEcology Evolution Behavior and SystematicsBiological Journal of the Linnean Society
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Evaluation of the Bioaccessibility of Antioxidant Bioactive Compounds and Minerals of Four Genotypes of Brassicaceae Microgreens

2019

Microgreens constitute an emerging class of fresh, healthy foods due to their nutritional composition. In this study the content of minerals and antioxidant bioactive compounds, and for the first time bioaccessibility, were evaluated in broccoli (Brassica oleracea L. var. italica Plenck), green curly kale (Brassica oleracea var. sabellica L.), red mustard (Brassica juncea (L.) Czern.) and radish (Raphanus sativus L.) hydroponic microgreens. Macro- (K, Ca, Mg) and oligo-elements (Fe, Zn), ascorbic acid, total soluble polyphenols, total carotenoids, total anthocyanins, total isothiocyanates and total antioxidant capacity (Trolox Equivalent Antioxidant Capacity and Oxygen Radical Absorbance Ca…

Health (social science)AntioxidantOxygen radical absorbance capacity<i>Brassicaceae</i>medicine.medical_treatmentTrolox equivalent antioxidant capacityBrassicaRaphanusPlant Sciencelcsh:Chemical technologyHealth Professions (miscellaneous)Microbiologymicrogreensmedicinelcsh:TP1-1185Food scienceCarotenoidchemistry.chemical_classificationbioactive compoundsbiologyChemistryfood and beveragesmineralsAscorbic acidbiology.organism_classificationbioaccessibilityantioxidantsPolyphenolFood ScienceFoods
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Microbiological investigation of Raphanus sativus L. grown hydroponically in nutrient solutions contaminated with spoilage and pathogenic bacteria

2012

Abstract The survival of eight undesired (spoilage/pathogenic) food related bacteria (Citrobacter freundii PSS60, Enterobacter spp. PSS11, Escherichia coli PSS2, Klebsiella oxytoca PSS82, Serratia grimesii PSS72, Pseudomonas putida PSS21, Stenotrophomonas maltophilia PSS52 and Listeria monocytogenes ATCC 19114T) was investigated in mineral nutrient solution (MNS) during the crop cycle of radishes (Raphanus sativus L.) cultivated in hydroponics in a greenhouse. MNSs were microbiologically analyzed weekly by plate count. The evolution of the pure cultures was also evaluated in sterile MNS in test tubes. The inoculated trials contained an initial total mesophilic count (TMC) ranging between 6.…

Hygienic safety; Microbial transfer; Mineral nutrient solution; Raphanus sativus L.; Soilless cultivation; Undesired bacteriaFood spoilageSettore AGR/04 - Orticoltura E FloricolturaBacterial Physiological Phenomenamedicine.disease_causeMicrobiologySoilless cultivationRaphanusMicrobiologyHydroponicsmedicineMicrobial transferMicrobial ViabilityBacteriabiologyUndesired bacteriaPathogenic bacteriaKlebsiella oxytocaGeneral MedicineEnterobacterMineral nutrient solutionbiology.organism_classificationBacterial LoadPseudomonas putidaRandom Amplified Polymorphic DNA TechniqueCitrobacter freundiiRaphanus sativus L.Food MicrobiologyHygienic safetyTemperature gradient gel electrophoresisBacteriaSettore AGR/16 - Microbiologia AgrariaFood ScienceInternational Journal of Food Microbiology
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Biocalcite, a multifunctional inorganic polymer: Building block for calcareous sponge spicules and bioseed for the synthesis of calcium phosphate-bas…

2014

Calcium carbonate is the material that builds up the spicules of the calcareous sponges. Recent results revealed that the calcium carbonate/biocalcite-based spicular skeleton of these animals is formed through an enzymatic mechanism, such as the skeleton of the siliceous sponges, evolutionarily the oldest animals that consist of biosilica. The enzyme that mediates the calcium carbonate deposition has been identified as a carbonic anhydrase (CA) and has been cloned from the calcareous sponge species Sycon raphanus. Calcium carbonate deposits are also found in vertebrate bones besides the main constituent, calcium phosphate/hydroxyapatite (HA). Evidence has been presented that during the init…

Materials scienceGeneral Physics and Astronomychemistry.chemical_elementMineralogyReview02 engineering and technologyCalciumlcsh:Chemical technologybonelcsh:Technologysponge03 medical and health scienceschemistry.chemical_compoundVateriteNanotechnologylcsh:TP1-1185General Materials SciencebiocalciteSycon raphanusElectrical and Electronic Engineeringlcsh:Sciencebone formation030304 developmental biologycalcareous spiculesCalcite0303 health sciencesbiologyCalcareous spongelcsh:T021001 nanoscience & nanotechnologybiology.organism_classificationlcsh:QC1-999NanoscienceSpongeCalcium carbonatechemistryChemical engineeringlcsh:Q0210 nano-technologybioprintingCalcareouslcsh:PhysicsBeilstein Journal of Nanotechnology
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Microwave effects on germination and growth of radish (Raphanus sativusL.) seedlings

2002

Abstract Germination of radish seeds was delayed and reduced by low-power microwave exposure at 10.5 and 12.5 GHz. Irradiation decreased also hypocotyl growth rate. These effects were increased by rising of the microwave power and by the vertically polarised electromagnetic field. When the irradiation was suspended the seedling growth recovered.

Materials sciencebiologyMicrowave powerfood and beveragesRaphanusPlant Sciencebiology.organism_classificationHypocotylAgronomyGerminationSeedlingIrradiationGrowth rateMicrowaveActa Botanica Gallica
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The enzyme carbonic anhydrase as an integral component of biogenic Ca-carbonate formation in sponge spicules

2013

The inorganic scaffold of the spicules, the skeletal elements of the calcareous sponges, is formed of calcium carbonate (CaCO3). The growth of the approximately 300-μm large spicules, such as those of the calcareous sponge Sycon raphanus used in the present study, is a rapid process with a rate of about 65 μm/h. The formation of CaCO3 is predominantly carried out by the enzyme carbonic anhydrase (CA). The enzyme from the sponge S. raphanus was isolated and prepared by recombination. The CA-driven deposition of CaCO3 crystallites is dependent on temperature (optimal at 52 °C), the pH value of the reaction assay (7.5/8.0), and the substrate concentration (CO2 and Ca2+). During the initial pha…

Mineralogy010402 general chemistry01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular Biology03 medical and health scienceschemistry.chemical_compoundSponge spiculeSpongeSycon raphanus030304 developmental biologyCalcite0303 health sciencesCarbonic anhydrasebiologyCalcareous spongebiology.organism_classification0104 chemical sciencesSpongeCalcium carbonatechemistryChemical engineeringSycon raphanusCarbonateCalcareous spiculesCrystal formationCalcareousFEBS Open Bio
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Ecotoxicity of halloysite nanotube-supported palladium nanoparticles inRaphanus sativusL

2016

Halloysite nanotubes (HNTs) are natural nanomaterials that are biocompatible and available in large amounts at low prices. They are emerging nanomaterials with appealing properties for applications like support for metal nanoparticles (NPs). The potential environmental impacts of NPs can be understood in terms of phytotoxicity. Current research has been focusing on HNT applications in cell or animal models, while their use in plants is limited so their ecotoxicological impact is poorly documented. To date there are no studies on the phytotoxic effects of functionalized halloysites (functionalized-HNTs). To develop a quantitative risk assessment model for predicting the potential impact of H…

Mitotic indexbiologyChemistryHealth Toxicology and Mutagenesisfood and beveragesRaphanus02 engineering and technologyengineering.material010402 general chemistry021001 nanoscience & nanotechnologybiology.organism_classification01 natural sciencesHalloysite0104 chemical sciencesNanomaterialsSeedlingGerminationEnvironmental chemistryBotanyengineeringEnvironmental ChemistryPhytotoxicityEcotoxicity0210 nano-technologyEnvironmental Toxicology and Chemistry
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Enzyme-accelerated and structure-guided crystallization of calcium carbonate: Role of the carbonic anhydrase in the homologous system

2014

Abstract The calcareous spicules from sponges, e.g. from Sycon raphanus, are composed of almost pure calcium carbonate. In order to elucidate the formation of those structural skeletal elements, the function of the enzyme carbonic anhydrase (CA), isolated from this species, during the in vitro calcium carbonate-based spicule formation, was investigated. It is shown that the recombinant sponge CA substantially accelerates calcium carbonate formation in the in vitro diffusion assay. A stoichiometric calculation revealed that the turnover rate of the sponge CA during the calcification process amounts to 25 CO2 s−1 × molecule CA−1. During this enzymatically driven process, initially pat-like pa…

Molecular Sequence DataInorganic chemistryBiomedical Engineeringchemistry.chemical_elementCalciumBiochemistryCalcium Carbonatelaw.inventionBiomaterialschemistry.chemical_compoundSponge spiculelawSpectroscopy Fourier Transform InfraredAnimalsAmino Acid SequenceSycon raphanusCrystallizationMolecular BiologyCarbonic AnhydrasesMineralsbiologyGeneral MedicineElementsbiology.organism_classificationPoriferaCrystallographySpongeCalcium carbonatechemistryCrystallizationCalcareousBiotechnologyBiomineralizationActa Biomaterialia
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The Antigerminative Activity of Twenty-Seven Monoterpenes

2010

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MonoterpenePharmaceutical ScienceRaphanusphytotoxicityBiologyradicle elongationArticleLepidium sativumRaphanusAnalytical ChemistryBorneollcsh:QD241-441Structure-Activity Relationshipchemistry.chemical_compoundlcsh:Organic chemistryDrug DiscoveryBotanyRadiclePhysical and Theoretical ChemistryCarvoneDose-Response Relationship DrugOrganic Chemistrymonoterpenesfood and beveragesbiology.organism_classificationHorticultureEucalyptolgerminationchemistryChemistry (miscellaneous)GerminationAlcoholsSeedsMonoterpenesMolecular Medicinemonoterpenes; germination; radicle elongation; phytotoxicityGeraniolMolecules
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