Search results for "Reaction"

showing 10 items of 6134 documents

Direct energy transfer from the major antenna to the photosystem II core complexes in the absence of minor antennae in liposomes

2015

AbstractMinor antennae of photosystem (PS) II, located between the PSII core complex and the major antenna (LHCII), are important components for the structural and functional integrity of PSII supercomplexes. In order to study the functional significance of minor antennae in the energetic coupling between LHCII and the PSII core, characteristics of PSII–LHCII proteoliposomes, with or without minor antennae, were investigated. Two types of PSII preparations containing different antenna compositions were isolated from pea: 1) the PSII preparation composed of the PSII core complex, all of the minor antennae, and a small amount of major antennae (MCC); and 2) the purified PSII dimeric core comp…

Photosynthetic reaction centreLiposomePhotosystem IIChemistryPhotochemistryLight-Harvesting Protein ComplexesBiophysicsPhotosystem II Protein ComplexCell BiologyMinor antennaPhotochemistryFluorescenceBiochemistryProteoliposomePhotosystem IIProtein–protein interactionLight-harvesting complexSpectrometry FluorescenceEnergy TransferThylakoidLiposomesLight-harvesting complexAntenna (radio)PhotosystemBiochimica et Biophysica Acta (BBA) - Bioenergetics
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Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser

2014

We describe a method to measure ultrafast protein structural changes using time-resolved wide-angle X-ray scattering at an X-ray free-electron laser. We demonstrated this approach using multiphoton excitation of the Blastochloris viridis photosynthetic reaction center, observing an ultrafast global conformational change that arises within picoseconds and precedes the propagation of heat through the protein. This provides direct structural evidence for a 'protein quake': the hypothesis that proteins rapidly dissipate energy through quake-like structural motions. peerReviewed

Photosynthetic reaction centreMaterials scienceProtein ConformationPhysics::OpticsPhycobiliproteinsfrequency vibrational-modesRadiation DosageBiochemistryMolecular physicsArticlelaw.inventionProtein structureX-Ray Diffractionlawddc:570Scattering Small AngleMolecular Biologyta116Quantitative Biology::BiomoleculesScatteringLasersMolecular biophysicsFree-electron laserCell BiologyLaserstructural dynamicsEnergy TransferPicosecondBiophysicsUltrashort pulseBiotechnologyNature methods
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Ultrafast Electron Transfer in Photosynthesis: Reduced Pheophytin and Quinone Interaction Mediated by Conical Intersections

2007

The mechanism of electron transfer (ET) from reduced pheophytin (Pheo−) to the primary stable photosynthetic acceptor, a quinone (Q) molecule, is addressed by using high‐level ab initio computations and realistic molecular models. The results reveal that the ET process involving the (Pheo−+Q) and (Pheo+Q−) oxidation states can be essentially seen as an ultrafast radiationless transition between the two hypersurfaces taking place via conical intersections (CIs) and it is favoured when the topology of the interacting moieties make possible some overlap between the lowest occupied molecular orbitals (LUMO) of the two systems. Thus, it is anticipated that large scale motions, which are difficul…

Photosynthetic reaction centrePheophytinElectron transferchemistry.chemical_compoundChemistryAb initio quantum chemistry methodsMolecular orbitalPhotochemistryQuantum chemistryAcceptorHOMO/LUMOAIP Conference Proceedings
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Red Spectral Forms of Chlorophylls in Green Plant PSI - A Site-Selective and High-Pressure Spectroscopy Study

2003

One of the special spectroscopic characteristics of photosystem I (PSI) complexes is that they possess absorption and emission bands at lower energy than those of the reaction center. In this paper, the red pigment pools of PSI-200, PSI-core, and LHCI complex from Arabidopsis thaliana have been characterized at low temperatures by means of spectrally selective (hole-burning and fluorescence line-narrowing) and high-pressure spectroscopic techniques. It was shown that the green plant PSI-200 complex has at least three red pigment pools, from which two are located in the PSI-core and one, in the peripheral light-harvesting complex I (LHCI). All of the red pigment pools are characterized by st…

Photosynthetic reaction centrePhysics::Biological PhysicsChlorophyll a/dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energyAnalytical chemistryAstrophysics::Cosmology and Extragalactic AstrophysicsPhotosystem IPhotosynthesisSurfaces Coatings and Filmschemistry.chemical_compoundPigmentchemistryAbsorption bandvisual_artMaterials Chemistryvisual_art.visual_art_mediumAstrophysics::Solar and Stellar AstrophysicsSDG 7 - Affordable and Clean EnergyPhysical and Theoretical ChemistrySpectroscopyAbsorption (electromagnetic radiation)
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Enhanced electron-transfer properties of cofacial porphyrin dimers through pi-pi interactions

2009

pi-pi assisted: Photoinduced electron transfer from cofacial porphyrin dimers to electron acceptors is prominently accelerated, whereas the back electron transfer is decelerated, relative to the corresponding porphyrin monomer (see figure).The radical cation of zinc tetrapentylporphyrin is dimerized with an excess of the neutral counterpart to form the dimer radical cation in which the unpaired electron is delocalized over both porphyrin rings. The dimeric radical cation exhibits an NIR absorption spectrum characteristic of weak pi-bond formation between the porphyrin rings. When cofacial porphyrin dimers, linked by different spacers, are oxidized such pi-bond formation between the porphyri…

Photosynthetic reaction centrePorphyrinsPhotosynthetic Reaction Center Complex ProteinsElectron donorpi interactionsPhotochemistry010402 general chemistry01 natural sciencesPhotoinduced electron transferCatalysisElectron Transportchemistry.chemical_compoundElectron transferredox chemistrypolycyclic compoundsComputingMilieux_MISCELLANEOUSchemistry.chemical_classificationphotosynthesisphotochemistryMolecular StructureChemistry010405 organic chemistryOrganic ChemistryGeneral ChemistryElectron acceptorelectron transferPorphyrinMarcus theory0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryZincUnpaired electronModels Chemical[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryThermodynamicsOxidation-ReductionAlgorithms
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Single amino acids in the lumenal loop domain influence the stability of the major light-harvesting chlorophyll a/b complex.

2004

The major light-harvesting complex of photosystem II (LHCIIb) is one of the most abundant integral membrane proteins. It greatly enhances the efficiency of photosynthesis in green plants by binding a large number of accessory pigments that absorb light energy and conduct it toward the photosynthetic reaction centers. Most of these pigments are associated with the three transmembrane and one amphiphilic alpha helices of the protein. Less is known about the significance of the loop domains connecting the alpha helices for pigment binding. Therefore, we randomly exchanged single amino acids in the lumenal loop domain of the bacterially expressed apoprotein Lhcb1 and then reconstituted the muta…

Photosynthetic reaction centreProtein FoldingPhotosystem IIPigment bindingDNA Mutational AnalysisLight-Harvesting Protein ComplexesPeasPhotosystem II Protein ComplexBiologyBiochemistryTransmembrane proteinProtein Structure SecondaryProtein Structure TertiaryB vitaminsBiochemistryAmino Acid SubstitutionMutant proteinMutagenesis Site-DirectedPoint MutationAmino AcidsIntegral membrane proteinAccessory pigmentGene LibraryPlant ProteinsBiochemistry
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Picosecond time-resolved study on the nature of high-energy-state quenching in isolated pea thylakoids different localization of zeaxanthin dependent…

1996

Abstract The influence of the transthylakoid proton gradient on the kinetics of picosecond fluorescence decay was examined using isolated pea thylakoids having high or low zeaxanthin contents. Fluorescence lifetime measurements were performed with open (Fo) and closed (Fm) PS II reaction centers. Zeaxanthin formation in membrane energized isolated thylakoids led to a marked decrease of the average fluorescence lifetime at both Fm and Fo. In contrast, when zeaxanthin synthesis was blocked by the inhibitor DTT, the fluorescence lifetime decrease was less pronounced in the Fm state and totally missing in the Fo state. Samples containing the uncoupler ammonium chloride did not exhinit any zeaxa…

Photosynthetic reaction centreRadiationQuenching (fluorescence)Radiological and Ultrasound TechnologyPhotosystem IIChemistryBiophysicsfood and beveragesPhotochemistryFluorescenceeye diseasesZeaxanthinchemistry.chemical_compoundReaction rate constantThylakoidRadiology Nuclear Medicine and imagingElectrochemical gradientJournal of Photochemistry and Photobiology B: Biology
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Myoglobin embedded in saccharide amorphous matrices: water-dependent domains evidenced by small angle X-ray scattering

2010

We report Small Angle X-ray Scattering (SAXS) measurements performed on samples of carboxy-myoglobin (MbCO) embedded in low-water trehalose glasses. Results showed that, in such samples, "low-protein" trehalose-water domains are present, surrounded by a protein-trehalose-water background; such finding is supported by Infrared Spectroscopy (FTIR) measurements. These domains, which do not appear in the absence of the protein and in analogous sucrose systems, preferentially incorporate the incoming water at the onset of rehydration, and disappear following large hydration. This observation suggests that, in organisms under anhydrobiosis, analogous domains could play a buffering role against th…

Photosynthetic reaction centreSucroseGLASS-TRANSITIONGeneral Physics and AstronomyInfrared spectroscopyRhodobacter sphaeroideschemistry.chemical_compoundRhodobacter sphaeroidesScattering Small AngleSpectroscopy Fourier Transform InfraredPHOSPHOLIPID-BILAYERREACTION CENTERSPhysical and Theoretical ChemistrySettore CHIM/02 - Chimica FisicabiologyScatteringSmall-angle X-ray scatteringMyoglobinTrehaloseWaterbiology.organism_classificationPROTEIN DYNAMICSTrehaloseMOLECULAR-DYNAMICS SIMULATIONAmorphous solidCrystallographyMyoglobinchemistryTHERMAL-DENATURATIONNEUTRON-SCATTERINGCARBOXY-MYOGLOBINEXTERNAL MATRIXTREHALOSE-COATED MBCO
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Quantum Chemical Simulations of Excited-State Absorption Spectra of Photosynthetic Bacterial Reaction Center and Antenna Complexes

2011

The semiempirical ZINDO/S CIS configuration interaction method has been used to study the ground- and excited-state absorption spectra of wild type and heterodimer M202HL reaction centers from purple bacterium Rhodobacter sphaeroides as well as of peripheral LH2 and LH3 light harvesting complexes from purple bacterium Rhodopseudomonas acidophila. The calculations well reproduce the experimentally observed excited-state absorption spectra between 1000 and 17,000 cm(-1), despite the necessarily limited number of chromophores and protein subunits involved in the calculations. The electron density analysis reveals that the charge transfer between adjacent chromophores dominates the excited-stat…

Photosynthetic reaction centrebiologyAbsorption spectroscopyChemistryLight-Harvesting Protein Complexesbiology.organism_classificationPhotochemistryAbsorptionSurfaces Coatings and FilmsLight-harvesting complexRhodopseudomonasRhodobacter sphaeroidesElectron transferchemistry.chemical_compoundBacterial ProteinsChemical physicsExcited stateMaterials ChemistryQuantum TheoryZINDOBacteriochlorophyllPhysical and Theoretical Chemistryta116The Journal of Physical Chemistry B
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Thylakoid Membrane Maturation and PSII Activation Are Linked in Greening Synechocystis sp. PCC 6803 Cells

2013

Abstract Thylakoid membranes are typical and essential features of both chloroplasts and cyanobacteria. While they are crucial for phototrophic growth of cyanobacterial cells, biogenesis of thylakoid membranes is not well understood yet. Dark-grown Synechocystis sp. PCC 6803 cells contain only rudimentary thylakoid membranes but still a relatively high amount of phycobilisomes, inactive photosystem II and active photosystem I centers. After shifting dark-grown Synechocystis sp. PCC 6803 cells into the light, “greening” of Synechocystis sp. PCC 6803 cells, i.e. thylakoid membrane formation and recovery of photosynthetic electron transport reactions, was monitored. Complete restoration of a t…

Photosystem IIPhysiologyChemistryCytochrome b6f complexfood and beveragesLight-harvesting complexes of green plantsmacromolecular substancesPlant SciencePhotosystem IBiochemistryLight-dependent reactionsThylakoidQuantasomepolycyclic compoundsGeneticsBiophysicsPhotosystemPlant Physiology
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