Search results for "Relative species abundance"

showing 10 items of 64 documents

Accounting for preferential sampling in species distribution models

2019

D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…

0106 biological sciencesComputer scienceQH301 BiologySpecies distributionPoint processesStochastic partial differential equation01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_6774EspèceAbundance (ecology)StatisticsPesqueríasQAOriginal Researchhttp://aims.fao.org/aos/agrovoc/c_241990303 health sciencesEcologyU10 - Informatique mathématiques et statistiquesSampling (statistics)Integrated nested Laplace approximationstochastic partial differential equationVariable (computer science)symbolsÉchantillonnageSpecies Distribution Models (SDMs)Modèle mathématiqueBayesian probabilityNDASDistribution des populations010603 evolutionary biologyQH30103 medical and health sciencessymbols.namesakeCovariateQA MathematicsSDG 14 - Life Below WaterCentro Oceanográfico de Murciaspecies distribution modelsRelative species abundanceEcology Evolution Behavior and Systematicspoint processes030304 developmental biologyNature and Landscape Conservationhttp://aims.fao.org/aos/agrovoc/c_6113http://aims.fao.org/aos/agrovoc/c_7280Markov chain Monte Carlointegrated nested Laplace approximationU30 - Méthodes de rechercheBayesian modelling
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Ectosymbiosis is a critical factor in the local benthic biodiversity of the Antarctic deep sea.

2008

10 pages; International audience; In deep-sea benthic environments, competition for hard substrates is a critical factor in the distribution and diversity of organisms. In this context, the occurrence of biotic substrates in addition to mineral substrates may change the characteristics of sessile fauna. We tested this hypothesis at different localities of the Weddell Sea (Antarctica) by studying the diversity of ectosymbionts living on the spines of cidaroids (echinoids). The presence of cidaroids promoted a higher total specific richness and increased sessile species abundance, but did not change the diversity. Analyses of species distribution suggested that the cidaroids are a favourable …

0106 biological sciencesFaunaBiodiversityAquatic ScienceBiologyGeneralist and specialist speciesCidaroidea010603 evolutionary biology01 natural sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosis14. Life underwaterSymbiosisRelative species abundanceEcology Evolution Behavior and SystematicsSpecies diversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyWeddell SeaEcologyEcology010604 marine biology & hydrobiologyfungiSpecies diversityCidaroidsSpecies abundance15. Life on landHabitatBenthic zoneSpecies richness[SDE.BE]Environmental Sciences/Biodiversity and EcologyNull models[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Unsupervised Classification of Acoustic Echoes from Two Krill Species in the Southern Ocean (Ross Sea)

2021

This work presents a computational methodology able to automatically classify the echoes of two krill species recorded in the Ross sea employing scientific echo-sounder at three different frequencies (38, 120 and 200 kHz). The goal of classifying the gregarious species represents a time-consuming task and is accomplished by using differences and/or thresholds estimated on the energy features of the insonified targets. Conversely, our methodology takes into account energy, morphological and depth features of echo data, acquired at different frequencies. Internal validation indices of clustering were used to verify the ability of the clustering in recognizing the correct number of species. Th…

0106 biological sciencesKrillbiologybusiness.industry010604 marine biology & hydrobiologyEuphausiaSettore MAT/01 - Logica MatematicaEuphausia crystallorophiasbiology.organism_classificationSpatial distributionMachine learning for pelagic species classification01 natural sciencesKrill identification010104 statistics & probabilityRoss SeaAcoustic dataArtificial intelligence0101 mathematicsCluster analysisbusinessRelative species abundanceGeologyEnergy (signal processing)Global biodiversityRemote sensing
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Community size can affect the signals of ecological drift and niche selection on biodiversity

2020

Made available in DSpace on 2020-12-12T01:24:05Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-06-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Academy of Finland Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Ecological drift can override the effects of deterministic niche selection on small populations and drive the assembly of some ecological communities. We tested this hypothesis with a unique data set sampled identically in 200 streams in two regions (tropical Brazil and boreal Finland) that differ in macroinvertebrate community size by fivefold. Null models allowed us t…

0106 biological sciencesMETACOMMUNITIESNichenull modelsBeta diversityBiodiversitydispersal metacommunities010603 evolutionary biology01 natural sciencesCOLONIZATIONDISPERSALCONNECTIVITYAbundance (ecology)TROPICAL STREAMbeta-diversity deviation14. Life underwaterdispersalDISTURBANCEBETA-DIVERSITYRelative species abundanceEcosystemFinlandEcology Evolution Behavior and SystematicsRESTORATIONdemographic stochasticityβ-diversity deviationvesieläimistöEcology010604 marine biology & hydrobiologySmall population sizeBiodiversitybeta diversity deviation15. Life on landBiotaluonnon monimuotoisuusbiodiversiteettiGeographyHabitat destruction13. Climate action1181 Ecology evolutionary biologySIMILARITYPATTERNShyönteisetcommunity assemblySpecies richnessaquatic insectsmetacommunitiesBrazil
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Effects of environmental and temporal factors on Glomeromycotina spores in sand dunes along the Gulf of Valencia (Spain)

2019

Abstract AMF symbiosis in sand dunes is the key for maintenance of stable vegetation. The main goal of this work was to determine the effects of environmental and temporal factors on AMF living in sand dunes (Gulf of Valencia, Spain). Soil samples were collected seasonally at 6 sites, during 2 yrs, from three habitats and four plant species and the frequency and relative abundance of AMF was examined. AMF were more frequent in mobile than in embryonic dunes, in spring and in sites with old vegetation. Ten AMF species were identified, their distribution depending mainly on the anthropogenic disturbance of the site. Gigasporaceae Cetraspora sp. and Dentiscutata sp. preferred undisturbed soil …

0106 biological sciencesMediterranean climateEcologybiologyEcologyEcological ModelingPlant ScienceVegetationbiology.organism_classification010603 evolutionary biology01 natural sciencesSand dune stabilizationGlomeraceaeHabitatSoil waterRelative species abundanceEcology Evolution Behavior and Systematics010606 plant biology & botanyGigasporaceaeFungal Ecology
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Community size affects the signals of ecological drift and niche selection on biodiversity

2019

AbstractEcological drift can override the effects of deterministic niche selection on small populations and drive the assembly of small communities. We tested the hypothesis that smaller local communities are more dissimilar among each other because of ecological drift than larger communities, which are mainly structured by niche selection. We used a unique, comprehensive dataset on insect communities sampled identically in a total of 200 streams in climatically different regions (Brazil and Finland) that differ in community size by fivefold. Null models allowed us to estimate the magnitude to which beta diversity deviates from the expectation under a random assembly process while taking di…

0106 biological sciencesMetacommunityEcology010604 marine biology & hydrobiologynull modelsNicheCommunity structureBeta diversitySmall population sizebeta diversity deviation15. Life on land010603 evolutionary biology01 natural sciencesGeographyHabitat destruction13. Climate actioncommunity assemblySpecies richnessaquatic insectsdispersalmetacommunitiesRelative species abundancedemographic stochasticity
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2017

AbstractBeneficial effects of CO2 on photosynthetic organisms will be a key driver of ecosystem change under ocean acidification. Predicting the responses of macroalgal species to ocean acidification is complex, but we demonstrate that the response of assemblages to elevated CO2 are correlated with inorganic carbon physiology. We assessed abundance patterns and a proxy for CO2:HCO3− use (δ13C values) of macroalgae along a gradient of CO2 at a volcanic seep, and examined how shifts in species abundance at other Mediterranean seeps are related to macroalgal inorganic carbon physiology. Five macroalgal species capable of using both HCO3− and CO2 had greater CO2 use as concentrations increased.…

0106 biological sciencesMultidisciplinary010504 meteorology & atmospheric sciencesδ13CObligateEcology010604 marine biology & hydrobiologyBiodiversityPhysiologyOcean acidificationBiologybiology.organism_classification01 natural sciencesTotal inorganic carbonAlgaeEcosystemRelative species abundance0105 earth and related environmental sciencesScientific Reports
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25S rDNA-based molecular monitoring of glomalean fungi in sewage sludge-treated field plots

2001

Recycling of sewage wastes in agriculture is likely to affect the biological activity of soils through contamination of ecosystems by pathogens and metallic or organic micropollutants. The impact of sewage sludge spreading under field conditions on arbuscular mycorrhiza (AM) formation by a community of glomalean fungi was evaluated using a nested polymerase chain reaction (PCR) and discriminating primers based on 25S rDNA polymorphisms to detect different fungal species within root systems. Medicago truncatula was grown in soil of field plots amended or not with a composted sewage sludge, spiked or not with organic or metallic micropollutants. Overall AM development in roots decreased with …

0106 biological sciencesSewageRoot systemPlant RootsPolymerase Chain Reaction01 natural sciencesMicrobiologyGLOMALESADN RIBOSOMIALSoil PollutantsDNA FungalSymbiosisRelative species abundance[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologySoil MicrobiologyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics2. Zero hungerPollutantSewagebiologybusiness.industryEcologyfungiFungiAgricultureFabaceae04 agricultural and veterinary sciences15. Life on landContaminationbiology.organism_classificationArbuscular mycorrhizaBiodegradation Environmental[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyRNA Ribosomal13. Climate actionEnvironmental chemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesbusinessSludgeEnvironmental Monitoring010606 plant biology & botany
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Reinforcement targets sexual or postmating prezygotic reproductive barriers depending on species abundance and population history

2018

AbstractThe impact of different reproductive barriers on species or population isolation may vary in different stages of speciation depending on evolutionary forces acting within species and through species’ interactions. Genetic incompatibilities between interacting species are expected to reinforce prezygotic barriers in sympatric populations and create character displacement between conspecific populations living within and outside the area of sympatry. The outcome of reinforcement has been suggested to be affected by the strength of postzygotic barriers, the history of species coexistence, and the impact of species abundancies on females’ discrimination against heterospecific males. We …

0106 biological sciencesSympatry0303 health scienceseducation.field_of_studybiologymedia_common.quotation_subjectPopulationReproductive isolationbiology.organism_classification010603 evolutionary biology01 natural sciences03 medical and health sciencesSpeciationEvolutionary biologySympatric speciationCharacter displacementeducationDrosophilaRelative species abundance030304 developmental biologymedia_common
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Hydrology Affects Environmental and Spatial Structuring of Microalgal Metacommunities in Tropical Pacific Coast Wetlands

2016

The alternating climate between wet and dry periods has important effects on the hydrology and therefore on niche-based processes of water bodies in tropical areas. Additionally, assemblages of microorganism can show spatial patterns, in the form of a distance decay relationship due to their size or life form. We aimed to test spatial and environmental effects, modulated by a seasonal flooding climatic pattern, on the distribution of microalgae in 30 wetlands of a tropical dry forest region: the Pacific coast of Costa Rica and Nicaragua. Three surveys were conducted corresponding to the beginning, the highest peak, and the end of the hydrological year during the wet season, and species abun…

0106 biological sciencesTopographyMarine and Aquatic Scienceslcsh:MedicineWetlandNicaragua01 natural sciencesGeographical locationsFloodingTropical climateMicroalgaelcsh:ScienceMultidisciplinarygeography.geographical_feature_categoryGeographyEcologyPlantsPlanktonPlanktonGeography551.48 HidrologíaSeasonsResearch ArticleFreshwater EnvironmentsWet seasonTropical and subtropical dry broadleaf forestsCosta RicaHidrologíaAlgaePacífico tropical010603 evolutionary biologySurface WaterAnimalsRelative species abundanceHydrologyDistance decayLandformsTropical ClimatePacific Ocean010604 marine biology & hydrobiologyEcology and Environmental Scienceslcsh:ROrganismsAquatic EnvironmentsBiology and Life SciencesGeomorphologyCentral AmericaInvertebratesWetlandsPhytoplanktonNorth AmericaEarth SciencesSpatial ecologylcsh:QHydrologyPeople and places
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