Search results for "Repo"

showing 10 items of 2753 documents

The Software Crisis of Synthetic Biology

2016

In fifteen years, Synthetic Biology (SB) has moved from proof-of-concept designs to several flagship achievements. Standardisation efforts are still under way, basic engineering concepts such as modularity and orthogonality are still controversial in biology, and making predictions from computer models is still unreliable. A deep characterization in the pattern of re-use of biological blocks in SB has not been attempted to date. We have compared the topological organisation of two different technological networks, one associated to a standard, large-scale software repository and the second provided by the Registry of Standard Biological Parts (RSBP). Our results strongly suggest that softwa…

0303 health sciencesOrthogonality (programming)Computer scienceSystems biologyComplex system02 engineering and technologyBioinformaticsData science03 medical and health sciencesSynthetic biologySoftware crisis020204 information systems0202 electrical engineering electronic engineering information engineeringRegistry of Standard Biological PartsSoftware repository030304 developmental biology
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C4 ‐dicarboxylates and l ‐aspartate utilization by Escherichia coli K‐12 in the mouse intestine: l ‐aspartate as a major substrate for fumarate respi…

2021

C4-dicarboxylates, such as fumarate, L-malate and L-aspartate represent substrates for anaerobic growth of Escherichia coli by fumarate respiration. Here, we determined whether C4-dicarboxylate metabolism as well as fumarate respiration contribute to colonization of the mammalian intestinal tract. Metabolite profiling revealed that the murine small intestine contained high and low levels of L-aspartate and L-malate, respectively, whereas fumarate was nearly absent. Under laboratory conditions, addition of C4-dicarboxylate at concentrations corresponding to the levels of the C4-dicarboxylates in the small intestine (2.6 mMol/kg dry weight) induced the dcuBp-lacZ reporter gene (67% of maximal…

0303 health sciencesReporter gene030306 microbiologyMutantMetabolismBiologymedicine.disease_causeMicrobiologySmall intestine03 medical and health sciencesmedicine.anatomical_structureBiochemistryRespirationmedicineAnaerobic exerciseEscherichia coliGeneEcology Evolution Behavior and Systematics030304 developmental biologyEnvironmental Microbiology
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Ancient bacterial genomes reveal a formerly unknown diversity ofTreponema pallidumstrains in early modern Europe

2020

SummarySexually transmitted (venereal) syphilis marked European history with a devastating epidemic at the end of the 15thcentury, and is currently re-emerging globally. Together with non-venereal treponemal diseases, like bejel and yaws, found in subtropical and tropical regions, it poses a prevailing health threat worldwide. The origins and spread of treponemal diseases remain unresolved, including syphilis’ potential introduction into Europe from the Americas. Here, we present the first genetic data from archaeological human remains reflecting a previously unknown diversity ofTreponema pallidumin historical Europe. Our study demonstrates that a variety of strains related to both venereal…

0303 health sciencesTreponemaLineage (genetic)biologymedia_common.quotation_subject030231 tropical medicineGenetic dataBacterial genome sizemedicine.diseasebiology.organism_classification3. Good health03 medical and health sciences0302 clinical medicineSister groupEvolutionary biologymedicineSyphilisEarly modern Europe030304 developmental biologyDiversity (politics)media_common
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Regenerative endodontic procedure combined with apical surgery of a necrotic permanent incisor with extensive periapical lesion using plasma rich in …

2021

Background The aim of this case report is to describe the step-by step and outcomes of a treatment approach which simultaneously combines a Regenerative Endodontic Procedure (REP) and apical surgery using PRGF as treatment of a post-traumatic necrotic permanent central incisor with extensive periapical lesion and undeveloped apex in a 16 years-old patient. Case description A 16 years-old patient with an extensive periapical lesion in the maxillary central incisor was treated with a combination of REP and periapical surgery in the same visit. A Bi- antibiotic paste (BAP) was used to priorly disinfect the canal, which was posteriorly sealed with MTA placed over a PRGF clot at the same time th…

0303 health sciencesbusiness.industryRadiographyRadiodensityDentistryCase Report030206 dentistryApex (geometry)Operative Dentistry and EndodonticsLesionPeriapical lesion03 medical and health sciences0302 clinical medicinemedicine.anatomical_structureApical surgeryIncisorMedicineMaxillary central incisormedicine.symptombusinessGeneral DentistryUNESCO:CIENCIAS MÉDICAS030304 developmental biologyJournal of Clinical and Experimental Dentistry
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Origin of modern syphilis and emergence of a contemporary pandemic cluster

2016

AbstractSyphilis swept across the world in the 16th century as one of most prominent documented pandemics and is re-emerging worldwide despite the availability of effective antibiotics. Little is known about the genetic patterns in current infections or the evolutionary origins of the disease due to the non-cultivable and clonal nature of the causative bacterium Treponema pallidum subsp. pallidum. In this study, we used DNA capture and next generation sequencing to obtain whole genome data from syphilis patient specimens and from treponemes propagated in laboratory settings. Phylogenetic analyses indicate that the syphilis strains examined here share a common ancestor after the 15th century…

0303 health scienceseducation.field_of_studyTreponemaPhylogenetic tree030306 microbiologyStrain (biology)PopulationBiologyDisease clusterbiology.organism_classificationmedicine.diseaseVirology3. Good health03 medical and health sciencesEvolutionary biologyPandemicmedicineSyphiliseducation030304 developmental biologyAncestor
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The Development and Initial Validation of a Short, Self-Report Measure on Social Inclusion for People with Intellectual Disabilities-A Transnational …

2021

Sport has been promoted as a means of increasing the social inclusion of persons with intellectual disabilities. Suitable tools for evaluating this claim are not readily available. The aim of this study was to develop a self-report tool for use by people with intellectual disabilities regarding the social inclusion they experience in sport and in the community. A three-phase process was used. In the first phase an item bank of questionnaire items was created and field-tested with 111 participants. Initial factor analysis identified 42 items which were further evaluated in Phase 2 with 941 participants from six European countries. Construct validity was established first through Exploratory …

030506 rehabilitationHealth Toxicology and MutagenesisApplied psychologyvammaisetPsychological interventionItem banklcsh:MedicineliikuntaurheiluSelf-report studySurveys and QuestionnairesIntellectual disabilityosallisuuskehitysvammaisetosallistuminenitsearviointibiology05 social sciencestransnationalConfirmatory factor analysissosiaaliset suhteetEuropeintellectual disabilitycommunitysocial inclusionsports0305 other medical sciencePsychologyInclusion (education)inkluusioPsychometricsSocial InclusionArticle03 medical and health sciencesyhteenkuuluvuusIntellectual Disability0502 economics and businessmedicineHumansself-report measuresAthleteslcsh:RPublic Health Environmental and Occupational HealthConstruct validityReproducibility of Resultsyhteisötmedicine.diseasebiology.organism_classificationSelf Report050212 sport leisure & tourismInternational journal of environmental research and public health
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Validity and reliability of the motivation for physical activity (RM4-FM) questionnaire

2021

There is a lack of validated instruments measuring motivation for physical activity (RM4-FM) in the Finnish language. The study examined the translated RM4-FM instrument’s psychometric properties in a sample of healthy, older Finnish adults. RM4-FM was translated and linguistically validated adhering to published guidelines. 65–75-year olds (n=102), completed the RM4-FM, the physical activity acceptance questionnaire (PAAQ) and sociodemographic characteristics questionnaires electronically. The RM4-FM was readministered one month after the initial assessment. RM4-FM translated well into Finnish. Motivation dimension scores were skewed towards high internal and low external motivation. A flo…

030506 rehabilitationValidityPhysical Therapy Sports Therapy and Rehabilitation03 medical and health sciences0302 clinical medicineFloor effectOrthopedics and Sports MedicineReliability (statistics)Self-determination theoryreliabiliteettimotivaatio030229 sport sciencesPatient-reported outcome measureExploratory factor analysisConfirmatory factor analysisSelf-determination theorypsykometriikkaPsychometric propertiesvaliditeettiScale (social sciences)mittarit (mittaus)Ceiling effectOriginal Article0305 other medical sciencePsychologyInactivityfyysinen aktiivisuusikääntyneetClinical psychologyJournal of Exercise Rehabilitation
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Impact of COVID-19 on the self-reported physical activity of people with complete thoracic spinal cord injury full-time manual wheelchair users

2021

Coronavirus SARS-CoV-2; COVID-19; 2019-nCoV; Activitat física; Lesió medul·lar Coronavirus SARS-CoV-2; COVID-19; 2019-nCoV; Actividad física; Lesión de la médula espinal Coronavirus SARS-CoV-2; COVID-19; 2019-nCoV; Physical activity; Spinal cord injury Context The emergence of COVID-19 caused a new public health crisis, leading to major changes in daily life routines, often including physical activity (PA) levels. The main goal of this study was to analyze the differences in self-reported physical activity of people with complete spinal cord injuries between the time prior to the COVID-19 lockdown and the lockdown period itself. Methods A sample of 20 participants with complete thoracic spi…

030506 rehabilitationmedicine.medical_specialty2019-20 coronavirus outbreakCoronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Clinical NeurologyPhysical activityManual wheelchair:terapéutica::terapéutica::modalidades de fisioterapia::terapéutica::tratamiento por actividad física [TÉCNICAS Y EQUIPOS ANALÍTICOS DIAGNÓSTICOS Y TERAPÉUTICOS]03 medical and health sciences0302 clinical medicinePhysical medicine and rehabilitation:Therapeutics::Therapeutics::Physical Therapy Modalities::Therapeutics::Exercise Therapy [ANALYTICAL DIAGNOSTIC AND THERAPEUTIC TECHNIQUES AND EQUIPMENT]:virosis::infecciones por virus ARN::infecciones por Nidovirales::infecciones por Coronaviridae::infecciones por Coronavirus [ENFERMEDADES]Pandèmia de COVID-19 2020-HumansMedicine:enfermedades del sistema nervioso::enfermedades del sistema nervioso central::enfermedades de la médula espinal::traumatismos de la médula espinal [ENFERMEDADES]ExercisePandemicsSpinal cord injurySpinal Cord Injuriesbusiness.industryPublic healthCOVID-19:Virus Diseases::RNA Virus Infections::Nidovirales Infections::Coronaviridae Infections::Coronavirus Infections [DISEASES]medicine.disease:Nervous System Diseases::Central Nervous System Diseases::Spinal Cord Diseases::Spinal Cord Injuries [DISEASES]WheelchairsCommunicable Disease ControlSelf ReportNeurology (clinical)0305 other medical sciencebusinessMedul·la espinal - Malalties - Exercici terapèutic030217 neurology & neurosurgeryThoracic spinal cord injuryThe Journal of Spinal Cord Medicine
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De Praepositione: The Emerging of Donatus’s Thought on Syntax?

2020

The paper aims at investigating the syntax treatment in late Antiquity through the analysis of the description of prepositions within Donatus’s Artes. As far as an organic and dedicated description of syntax is concerned, the Roman tradition of grammatical studies in late Antiquity shows an overall gap. However, reflections on syntax emerge from the parts of speech descriptions made by grammarians. The ultimate purpose of this paper is to understand if, and to what extent, traces of emerging thought on syntax can be found in Donatus’s description of prepositions. These are regarded as a syntactic object of study by the modern linguistic theory. To that end, the paper focuses on the textual …

050101 languages & linguisticsHistory05 social sciencesPerspective (graphical)Part of speechSyntaxObject (philosophy)LinguisticsTerminologySettore L-LIN/01 - Glottologia E Linguistica030507 speech-language pathology & audiology03 medical and health sciencesLate AntiquityLatin Donatus Syntax Preposition MetalanguageTheoretical linguistics0501 psychology and cognitive sciences0305 other medical scienceRelation (history of concept)
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Evidential meanings of o eso dicen

2019

En este artículo se analizan los valores del significado evidencial transmitidos por la construcción o eso dicen. Se examinan los distintos patrones discursivos y sintácticos en los que dicha construcción aparece, así como su uso como marca de evidencialidad indirecta. El análisis se realiza a partir del Corpus de Español (sección Web/Dialects) y se centra en la variedad europea del español. Se concluye que o eso dicen transmite diferentes valores de evidencialidad, tales como significado reportativo, rumor y folclore que vienen determinados por factores relacionados con la fijación de la construcción, el tipo de la fuente de información a la que remite y el carácter del ámbito sobre el que…

050101 languages & linguisticsreportativesreportativitéreportative exceptionnalité05 social sciencesreportativosevidentialitySpanishévidentialité050105 experimental psychologyfolcloreexcepcionalidad reportativaespagnolespañol0501 psychology and cognitive sciencesfolkloreevidencialidadreportative exceptionality
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