Search results for "Research Paper"

showing 10 items of 477 documents

Dynamic architecture and regulatory implications of the miRNA network underlying the response to stress in melon

2019

miRNAs are small RNAs that regulate mRNAs at both transcriptional and posttranscriptional level. In plants, miRNAs are involved in the regulation of different processes including development and stress-response. Elucidating how stress-responsive miRNAs are regulated is key to understand the global response to stress but also to develop efficient biotechnological tools that could help to cope with stress. Here, we describe a computational approach based on sRNA sequencing, transcript quantification and degradome data to analyse the accumulation, function and structural organization of melon miRNAs reactivated under seven biotic and abiotic stress conditions at two and four days post-treatmen…

Crops AgriculturalMelonTranscript quantificationPeriod (gene)Computational biologyBiologyRegulation of the stress response in crops03 medical and health sciences0302 clinical medicineGene Expression Regulation PlantStress PhysiologicalStress (linguistics)microRNAGene Regulatory NetworksGene SilencingMolecular Biology030304 developmental biology0303 health sciencesStructural organizationAbiotic stressCell BiologyMicroRNAsCucurbitaceaeRNA silencingPhenotypemiRNA networks030220 oncology & carcinogenesissRNAs analisysRNA InterferenceRNA silencingFunction (biology)Research PaperRNA Biology
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Knowledge, attitudes and practices towards COVID-19 among nursing students of the University of Palermo: results from an online survey.

2020

Introduction: The aim of the study was to evaluate the knowledge, attitude and practices towards Sars-CoV-2 among nursing students of University of Palermo during the rapid rise period of the COVID-19 pandemic. Materials and Methods: This is cross-sectional study. A survey was provided to all nursing students and consisted of two parts: demographics and Knowledge, Attitude and Practices (KAP) survey. A multivariate linear regression model was used and adjusted Odds Ratios (aOR) are presented. Results: 575 students were interviewed and their mean age was 22.3. The overall score indicates good knowledge (p=0.046) and good practices among the four courses of study (p=0.038). Multivariate linea…

Cross-Sectional StudieAdultMaleHealth Knowledge Attitudes PracticePracticePandemicSARS-CoV-2University studentCOVID-19Settore MED/42 - Igiene Generale E ApplicataUniversity studentsUniversity students.Young AdultCross-Sectional StudiesKnowledgeAttitudeSurveys and QuestionnairesSurveys and QuestionnaireHumansFemaleStudents NursingPandemicsResearch PaperJournal of preventive medicine and hygiene
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Structure of mammalian plasma fetuin-B and its mechanism of selective metallopeptidase inhibition

2018

The co-crystal structure of the metallopeptidase astacin with its specific protein inhibitor fetuin-B reveals a novel mechanism of inhibition.

Crystallographymammalian fertilizationmetallopeptidaseResearch Papersstructure determination570 Life sciencesenzyme mechanismsprotein inhibitorQD901-999multi-protein complexessperm–egg fusionpolyspermyprotein structureX-ray crystallography570 Biowissenschaften
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Enhanced oxidative stress and increased mitochondrial mass during Efavirenz-induced apoptosis in human hepatic cells

2010

BACKGROUND AND PURPOSE Efavirenz (EFV) is widely used in the treatment of HIV-1 infection. Though highly efficient, there is growing concern about EFV-related side effects, the molecular basis of which remains elusive. EXPERIMENTAL APPROACH In vitro studies were performed to address the effect of clinically relevant concentrations of EFV (10, 25 and 50 mu M) on human hepatic cells. KEY RESULTS Cellular proliferation and viability were reduced in a concentration-dependent manner. Analyses of the cell cycle and several cell death parameters (chromatin condensation, phosphatidylserine exteriorization, mitochondrial proapoptotic protein translocation and caspase activation) revealed that EFV tr…

CyclopropanesMalehepatotoxicityCarcinoma HepatocellularTime FactorsAnti-HIV AgentsCell SurvivalApoptosisMitochondria LiverPhosphatidylserinesAntioxidantsSuperoxidesHumansChromansantiretroviral drugsCell Proliferationreactive oxygen speciesDose-Response Relationship DrugCell CycleLiver NeoplasmsChromatin Assembly and DisassemblyResearch PapersGlutathioneBenzoxazinesmitochondriaOxidative Stressside effectscell deathLiverAlkynesFemaleEfavirenzApoptosis Regulatory ProteinsHeLa Cells
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Roflumilast, a phosphodiesterase 4 inhibitor, alleviates bleomycin-induced lung injury

2009

Mandarin translation of abstract Background and purpose:  The effects of a phosphodiesterase 4 (PDE4) inhibitor, roflumilast, on bleomycin-induced lung injury were explored in ‘preventive’ and ‘therapeutic’ protocols and compared with glucocorticoids. Experimental approach:  Roflumilast (1 and 5 mg·kg−1·d−1, p.o.) or dexamethasone (2.5 mg·kg−1·d−1, p.o.) was given to C57Bl/6J mice from day 1 to 14 (preventive) or day 7 to 21 (therapeutic) after intratracheal bleomycin (3.75 U·kg−1). In Wistar rats, roflumilast (1 mg·kg−1·d−1, p.o.) was compared with methylprednisolone (10 mg·kg−1·d−1, p.o.) from day 1 to 21 (preventive) or from day 10 to 21 (therapeutic), following intratracheal instillatio…

CyclopropanesMalemedicine.medical_specialtyPhosphodiesterase InhibitorsPulmonary FibrosisAminopyridinesLung injuryBiologyBleomycinBronchoalveolar Lavagechemistry.chemical_compoundBleomycinMiceFibrosisRight ventricular hypertrophyInternal medicinePulmonary fibrosismedicineAnimalsRats WistarLungDexamethasoneRoflumilastPharmacologymedicine.diagnostic_testReverse Transcriptase Polymerase Chain ReactionLung Injuryrespiratory systemmedicine.diseaseResearch Papersrespiratory tract diseasesRatsMice Inbred C57BLDisease Models AnimalBronchoalveolar lavageEndocrinologychemistryBenzamidesPhosphodiesterase 4 InhibitorsBronchoalveolar Lavage Fluidmedicine.drug
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Dynamic changes in the subcellular distribution of the tobacco ROS-producing enzyme RBOHD in response to the oomycete elicitor cryptogein.

2014

Highlight text The oomycete elicitor cryptogein triggers the relocation of RBOHD from intracellular compartments to the plasma membrane in tobacco cells. This suggests that intracellular trafficking is a potential determinant of RBOHD activity.

DETERGENT-RESISTANT MEMBRANESPhysiologyNicotiana tabacum[SDV]Life Sciences [q-bio]BY-2 cellsPlant SciencecryptogeinCell membranechemistry.chemical_compoundAPOPLASTIC OXIDATIVE BURSTCELL-SURFACEDISEASE RESISTANCE[MATH]Mathematics [math]Plant Proteinsreactive oxygen speciesFungal proteinNADPH oxidaseMicroscopy Confocalbiologyfood and beveragesElicitorCell biologymedicine.anatomical_structureBiochemistryprotein trafficking.[SDE]Environmental SciencessymbolsNADPH OXIDASE RBOHDprotein traffickingResearch PaperPhytophthoraCycloheximiderespiratory burst oxidase homolog D (RBOHD)Real-Time Polymerase Chain ReactionFungal Proteinssymbols.namesakeNICOTIANA-BENTHAMIANAMicroscopy Electron TransmissionTobaccomedicine[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[INFO]Computer Science [cs]NITRIC-OXIDENicotiana tabacumCell MembraneNADPH OxidasesGolgi apparatusbiology.organism_classificationSubcellular localizationLIPID RAFTSchemistryPLASMA-MEMBRANEbiology.proteinPLANT DEFENSE
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Parvovirus B19 nonstructural protein-induced damage of cellular DNA and resultant apoptosis.

2010

Parvovirus B19 is a widespread virus with diverse clinical presentations. The viral nonstructural protein, NS1, binds to and cleaves the viral genome, and induces apoptosis when transfected into nonpermissive cells, such as hepatocytes. We hypothesized that the cytotoxicity of NS1 in such cells results from chromosomal DNA damage caused by the DNA-nicking and DNA-attaching activities of NS1. Upon testing this hypothesis, we found that NS1 covalently binds to cellular DNA and is modified by PARP, an enzyme involved in repairing single-stranded DNA nicks. We furthermore discovered that the DNA nick repair pathway initiated by poly(ADPribose)polymerase and the DNA repair pathways initiated by …

DNA RepairDNA damageViral nonstructural proteinDNA repairPoly ADP ribose polymerasevirusesBlotting WesternParvovirus B19Viral Nonstructural ProteinsCell Linechemistry.chemical_compoundsystemic lupus erythematosusParvovirus B19 HumanHumansImmunoprecipitationPolymerasebiologyfulminant liver failureDNA damage and repairapoptosisvirus diseasesGeneral MedicineTransfectionMolecular biologyProliferating cell nuclear antigenchemistrybiology.proteinDNAautoantibodyDNA DamageResearch PaperInternational journal of medical sciences
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Lovastatin protects human endothelial cells from the genotoxic and cytotoxic effects of the anticancer drugs doxorubicin and etoposide

2006

Background and purpose: 3-Hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase inhibitors (statins) are frequently used lipid-lowering drugs. Moreover, they exert pleiotropic effects on cellular stress responses and death. Here, we analysed whether lovastatin affects the sensitivity of primary human endothelial cells (HUVEC) to the anticancer drug doxorubicin. Experimental approach: We investigated whether pretreatment of HUVEC with low dose of lovastatin influences the cellular sensitivity to doxorubicin. To this end, cell viability, proliferation and apoptosis as well as DNA damage-triggered stress response were analysed. Key results: Lovastatin reduced the cytotoxic potency of doxorub…

DNA ReplicationCell SurvivalDNA damageApoptosisBiologyPharmacologypolycyclic compoundsmedicineHumansTopoisomerase II InhibitorsDoxorubicinLovastatinEtoposideEtoposideFluorescent DyesPharmacologyAntibiotics AntineoplasticReverse Transcriptase Polymerase Chain ReactionTopoisomeraseCell CycleEndothelial Cellsnutritional and metabolic diseasesAntimutagenic AgentsFibroblastsCell cycleResearch PapersAntineoplastic Agents PhytogenicDoxorubicinDrug Resistance NeoplasmHMG-CoA reductasebiology.proteinlipids (amino acids peptides and proteins)LovastatinHydroxymethylglutaryl-CoA Reductase InhibitorsTopoisomerase-II InhibitorReactive Oxygen SpeciesFluorescein-5-isothiocyanateDNA Damagemedicine.drugBritish Journal of Pharmacology
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Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes.

2014

Several approaches have been described to fluorescently label and image DNA and chromatin in situ on the single-molecule level. These superresolution microscopy techniques are based on detecting optically isolated, fluorescently tagged anti-histone antibodies, fluorescently labeled DNA precursor analogs, or fluorescent dyes bound to DNA. Presently they suffer from various drawbacks such as low labeling efficiency or interference with DNA structure. In this report, we demonstrate that DNA minor groove binding dyes, such as Hoechst 33258, Hoechst 33342, and DAPI, can be effectively employed in single molecule localization microscopy (SMLM) with high optical and structural resolution. Upon ill…

DNA ReplicationHoechstDNA RepairDNA repairBiologyfluorescence microscopyDAPIchemistry.chemical_compoundphotoconversionsuper-resolution microscopylocalization microscopyFluorescence microscopeSPDMAnimalsHumansDAPIdSTORMSMLMFluorescent DyesMicroscopySuper-resolution microscopynucleusDNA replicationdSTORCell BiologyDNADNA Minor Groove BindingChromatinChromatinCell biologychemistryMicroscopy FluorescencechromatinblinkingDNAResearch PaperNucleus (Austin, Tex.)
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Three-dimensional solvation structure of ethanol on carbonate minerals

2020

Calcite and magnesite are important mineral constituents of the earth’s crust. In aqueous environments, these carbonates typically expose their most stable cleavage plane, the (10.4) surface. It is known that these surfaces interact with a large variety of organic molecules, which can result in surface restructuring. This process is decisive for the formation of biominerals. With the development of 3D atomic force microscopy (AFM) it is now possible to image solid–liquid interfaces with unprecedented molecular resolution. However, the majority of 3D AFM studies have been focused on the arrangement of water at carbonate surfaces. Here, we present an analysis of the assembly of ethanol – an o…

DYNAMICSMaterials scienceADSORPTIONSURFACECarbonate mineralsIonic bondingGeneral Physics and Astronomy02 engineering and technologylcsh:Chemical technology010402 general chemistrylcsh:Technology01 natural sciencesFull Research Paper3D AFMGENERAL FORCE-FIELDMolecular dynamicschemistry.chemical_compoundCALCITEMoleculeNanotechnologyWATERlcsh:TP1-1185General Materials ScienceElectrical and Electronic Engineeringlcsh:ScienceCalcitelcsh:THYDRATIONSolvationMD simulation021001 nanoscience & nanotechnologymagnesite540lcsh:QC1-9990104 chemical sciencesNanosciencechemistryChemical physicsCONJUGATE GRADIENTSCarbonatelcsh:Qethanol0210 nano-technologycalcitelcsh:Physicssolvation structureMagnesite
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