Search results for "Reti"

showing 10 items of 16256 documents

Fine-scale population dynamics in a marine fish species inferred from dynamic state-space models

2017

1. Identifying the spatial scale of population structuring is critical for the conservation of natural populations and for drawing accurate ecological inferences. However, population studies often use spatially aggregated data to draw inferences about population trends and drivers, potentially masking ecologically relevant population sub‐structure and dynamics. 2. The goals of this study were to investigate how population dynamics models with and without spatial structure affect inferences on population trends and the identification of intrinsic drivers of population dynamics (e.g. density dependence). 3. Specifically, we developed dynamic, age‐structured, state‐space models to test differe…

0106 biological sciencesPopulation DynamicsFishingPopulationEnvironment010603 evolutionary biology01 natural sciencesAnimalsGaduseducationEcology Evolution Behavior and Systematicseducation.field_of_studyBiomass (ecology)biologyNorwayEcology010604 marine biology & hydrobiologyFishesModels Theoreticalbiology.organism_classificationDensity dependenceGeographyGadus morhuaHabitatSpatial ecologyAnimal Science and ZoologyScale (map)Animal DistributionJournal of Animal Ecology
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An Empirical Evaluation of the Utility of Convex Hull and Standard Ellipse Areas for Assessing Population Niche Widths from Stable Isotope Data

2013

Stable isotope analyses are increasingly employed to characterise population niche widths. The convex hull area (TA) in a δ¹³C–δ¹⁵N biplot has been used as a measure of isotopic niche width, but concerns exist over its dependence on sample size and associated difficulties in among-population comparisons. Recently a more robust method was proposed for estimating and comparing isotopic niche widths using standard ellipse areas (SEA), but this approach has yet to be tested with empirical stable isotope data. The two methods measure different kind of isotopic niche areas, but both are now widely used to characterise isotopic niche widths of populations. We used simulated data and an extensive e…

0106 biological sciencesPopulation Dynamicslcsh:MedicinePopulation Modeling01 natural sciencesTheoretical EcologyFood Web StructureStatisticsRange (statistics)lcsh:ScienceFreshwater EcologyCarbon Isotopeseducation.field_of_studyMultidisciplinaryEcologyδ13CEcologyStable isotope ratioStatisticsFishesBiogeochemistryisotopic nicheTrophic Interactionstrophic nicheCommunity Ecologyconvex hullResearch ArticlePopulationNichestable isotopesBiostatistics010603 evolutionary biologyNiche ConstructionNormal distributionBayesian ellipse areavakaat isotoopitAnimals14. Life underwaterStatistical MethodseducationBiologyEcological nicheNitrogen Isotopes010604 marine biology & hydrobiologylcsh:RComputational BiologySpecies InteractionsSample size determinationSample SizeravintolokeroEnvironmental scienceta1181lcsh:QPopulation EcologyEcosystem ModelingMathematicsPLOS ONE
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Aflatoxins and A. flavus Reduction in Loaf Bread through the Use of Natural Ingredients

2018

In this study, the antifungal activity of yellow mustard (YMF) and oriental mustard (OMF) meal extracts against 14 strains of fungi was tested on a solid medium. The results obtained with the YMF were next confirmed in liquid medium determining the minimum inhibitory concentration (MIC) and the minimum fungicide concentration (MFC). Finally, the use of YMF as a natural preservative to extend the useful life of bread was evaluated. Breads with different concentrations of YMF (2, 4, 6 and 8 g/kg) were prepared and contaminated with Aspergillus flavus ISPA 8111 and Penicillium nordicum CECT 2320. For 10 days the formation of mycelium was observed, and after that the fungal growth and the mycot…

0106 biological sciencesPreservativeAflatoxinaflatoxinsAntifungal AgentsMustard CompoundsPharmaceutical ScienceAspergillus flavusMicrobial Sensitivity TestsShelf life01 natural sciencesArticleAnalytical Chemistrylcsh:QD241-441chemistry.chemical_compound0404 agricultural biotechnologylcsh:Organic chemistry010608 biotechnologyDrug DiscoveryFood sciencePhysical and Theoretical ChemistryLC-MS/MSMycotoxinMyceliumMolecular Structurebiologymycotoxin reductionOrganic Chemistrydigestive oral and skin physiologyPenicilliumfood and beveragesBread04 agricultural and veterinary sciencesbiology.organism_classification040401 food sciencemustard flourFungicideFood StoragechemistryChemistry (miscellaneous)Sodium propionateFood MicrobiologyFood PreservativesMolecular Medicineshelf lifePropionatesAspergillus flavusMolecules
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Reticulon-like proteins in Arabidopsis thaliana: structural organization and ER localization

2007

International audience; Reticulons are proteins that have been found predominantly associated with the endoplasmic reticulum in yeast and mammalian cells. While their functions are still poorly understood, recent findings suggest that they participate in the shaping of the tubular endoplamic reticulum (ER). Although reticulon-like proteins have been identified in plants, very little is known about their cellular localization and functions. Here, we characterized the reticulon-like protein family of Arabidopsis thaliana. Three subfamilies can be distinguished on the basis of structural organization and sequence homology. We investigated the subcellular localization of two members of the larg…

0106 biological sciencesProtein familyMolecular Sequence DataBiophysicsArabidopsis[SDV.BC]Life Sciences [q-bio]/Cellular BiologyRTLNB01 natural sciencesBiochemistryPlant Epidermis03 medical and health sciencesProtein structureStructural BiologyArabidopsisGeneticsArabidopsis thalianaAmino Acid SequenceMolecular BiologyCellular localizationConserved SequencePhylogeny030304 developmental biology0303 health sciencesbiologySequence Homology Amino AcidArabidopsis ProteinsEndoplasmic reticulumENDOPLASMIC RETICULUMCHLOROPLASTARABIDOPSIS THALIANACell BiologySubcellular localizationbiology.organism_classificationRETICULONBiochemistryReticulonRETICULON-LIKE PROTEIN BSequence Alignment010606 plant biology & botany
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A Network Model for the Correlation between Epistasis and Genomic Complexity

2008

The study of genetic interactions (epistasis) is central to the understanding of genome organization and evolution. A general correlation between epistasis and genomic complexity has been recently shown, such that in simpler genomes epistasis is antagonistic on average (mutational effects tend to cancel each other out), whereas a transition towards synergistic epistasis occurs in more complex genomes (mutational effects strengthen each other). Here, we use a simple network model to identify basic features explaining this correlation. We show that, in small networks with multifunctional nodes, lack of redundancy, and absence of alternative pathways, epistasis is antagonistic on average. In c…

0106 biological sciencesSilent mutationGenome evolutionDNA Mutational Analysislcsh:MedicineBiology010603 evolutionary biology01 natural sciencesGenomeModels BiologicalCorrelation03 medical and health sciencesComputational Biology/Metabolic NetworksGenetics and Genomics/Population GeneticsAnimalsHumanslcsh:Science030304 developmental biologyGenomic organization0303 health sciencesEvolutionary BiologyMultidisciplinaryComputational Biology/Systems BiologyGenomeEvolutionary Biology/Evolutionary and Comparative GeneticsModels GeneticHuman evolutionary geneticsSystems Biologylcsh:RRobustness (evolution)Computational BiologyGenetics and GenomicsEpistasis GeneticGenomicsModels TheoreticalEvolutionary biologyMutationEpistasislcsh:QAlgorithmsResearch ArticlePLoS ONE
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Life-cycle switching and coexistence of species with no niche differentiation.

2011

The increasing evidence of coexistence of cryptic species with no recognized niche differentiation has called attention to mechanisms reducing competition that are not based on niche-differentiation. Only sex-based mechanisms have been shown to create the negative feedback needed for stable coexistence of competitors with completely overlapping niches. Here we show that density-dependent sexual and diapause investment can mediate coexistence of facultative sexual species having identical niches. We modelled the dynamics of two competing cyclical parthenogens with species-specific density-dependent sexual and diapause investment and either equal or different competitive abilities. We show th…

0106 biological sciencesSpecies complexEcological Metricsmedia_common.quotation_subjectlcsh:MedicineMarine and Aquatic SciencesMarine BiologyDiapauseBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Sexual Behavior AnimalTheoretical EcologyAnimalslcsh:ScienceBiologymedia_commonCoexistence theoryEcological nicheFreshwater EcologyFacultativeMultidisciplinaryEcologyPopulation BiologyEcology010604 marine biology & hydrobiologylcsh:RNiche differentiationSpecies DiversityBiodiversityModels TheoreticalSexual reproductionSpecies InteractionsCommunity EcologyEarth Scienceslcsh:QPopulation EcologyResearch ArticlePloS one
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Effects of starvation on survival, cannibalism, body mass, and intestinal protozoan profile in the subterranean termite Reticulitermes lucifugus

2019

Scarcity or inadequate nutrition can affect biological and behavioural aspects of subterranean termites and their intestinal protozoan profile. The aim of this study was to investigate changes in survival, cannibalism, body mass, and protist community structure of Reticulitermes lucifugus Rossi subspecies “Sicily” following starvation to provide basic knowledge for the development of more specific studies on a possible survival strategy under stressful conditions. In nature, this termite consumes many food sources and its feeding activity is continuous during the year. In a 35-day laboratory experiment, groups of 50 termites (worker/soldier ratio 49:1) were subjected to two diets, starvatio…

0106 biological sciencesStarvationSocial insectProtistInadequate nutritionCannibalismBehaviour changeZoologySurvivorshipBiologyIntestinal protozoan010603 evolutionary biology01 natural sciences010602 entomologySettore AGR/11 - Entomologia Generale E ApplicataBasic knowledgeInsect ScienceSurvivorship curveSurvival strategymedicineReticulitermes lucifugusmedicine.symptomLaboratory experimentEcology Evolution Behavior and SystematicsInsectes Sociaux
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Null models for animal social network analysis and data collected via focal sampling: Pre‐network or node network permutation?

2020

In social networks analysis, two different approaches have predominated in creating null models for hypothesis testing, namely pre‐network and node network permutation approaches. Although the pre‐network permutation approach appears more advantageous, its use has mainly been restricted to data on associations and sampling methods such as ‘group follows’. The pre‐network permutation approach has recently been adapted to data on interactions and the focal sampling method, but its performance in different scenarios has not been thoroughly explored. Here, we assessed the performance of the pre‐network and node network permutation approach in several simulated scenarios based on proneness to fa…

0106 biological sciencesTheoretical computer scienceComputer scienceEcological Modeling05 social sciencesNull (mathematics)Social network analysis (criminology)Sampling (statistics)Group living010603 evolutionary biology01 natural sciences[SHS]Humanities and Social SciencesPermutationSciences du Vivant [q-bio]/Autre [q-bio.OT]0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSVDP::Samfunnsvitenskap: 200::Urbanisme og fysisk planlegging: 230
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Shift in Tuna Catches due to Ocean Warming.

2017

Ocean warming is already affecting global fisheries with an increasing dominance of catches of warmer water species at higher latitudes and lower catches of tropical and subtropical species in the tropics. Tuna distributions are highly conditioned by sea temperature, for this reason and their worldwide distribution, their populations may be a good indicator of the effect of climate change on global fisheries. This study shows the shift of tuna catches in subtropical latitudes on a global scale. From 1965 to 2011, the percentage of tropical tuna in longliner catches exhibited a significantly increasing trend in a study area that included subtropical regions of the Atlantic and western Pacifi…

0106 biological sciencesTime Factors010504 meteorology & atmospheric sciencesEffects of global warming on oceanslcsh:MedicineMarine and Aquatic SciencesOceanographyGlobal Warming01 natural sciencesOceansTropical climateClimate changeZoologíaPesqueríaslcsh:ScienceIndian OceanNorthern HemisphereLatitudeMultidisciplinaryGeographyFishesTemperatureAgricultureOsteichthyesVertebratesResearch ArticleCartographyOceans and SeasFisheriesClimate changeSede Central IEOSubtropicsAnimalsVulnerability of tropical countries to climate change14. Life underwaterOcean TemperatureTropical tuna distribution0105 earth and related environmental sciencesTropical ClimatePacific OceanTuna010604 marine biology & hydrobiologylcsh:RGlobal warmingOrganismsBiology and Life SciencesTropicsNumerical Analysis Computer-AssistedBodies of WaterModels TheoreticalFisherySea surface temperatureEffect on fisheries13. Climate actionEarth SciencesEnvironmental sciencelcsh:QTunaGeographic areas
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Self-organized dynamics in spatially structured populations

2001

Self-organization and pattern formation represent the emergence of order in temporal and spatial processes. Self-organization in population ecology is gaining attention due to the recent advances concerning temporal fluctuations in the population size of dispersal-linked subunits. We shall report that spatially structured models of population renewal promote the emergence of a complex power law order in spatial population dynamics. We analyse a variety of population models showing that self-organization can be identified as a temporal match in population dynamics among local units, and how the synchrony changes in time. Our theoretical results are concordant with analyses of population data…

0106 biological sciencesTime FactorsPopulationCarnivoraBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyArticleTraveling waveAnimalseducationBiological sciencesEcosystemGeneral Environmental Scienceeducation.field_of_studyGeneral Immunology and MicrobiologyEcology010604 marine biology & hydrobiologyPopulation sizeGeneral Medicine15. Life on landPopulation ecologyModels TheoreticalBiological SciencesPopulation modelPopulation dataGeneral Agricultural and Biological SciencesCartography
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