Search results for "Retina"

showing 10 items of 864 documents

The Usher syndrome 1G protein SANS participates in the transport of ciliary cargo in photoreceptor cells

2012

Human Usher syndrome (USH) is the most common form of combined deaf-blindness, characterized by profound congenital deafness, constant vestibular dysfunction and pre-pubertal onset of retinitis pigmentosa. The USH1G protein SANS (scaffold protein containing ankyrin repeats and SAM domain) is associated with microtubules and mediates a transport related periciliary protein network in photoreceptor cells. Here we aim to enlighten the involvement of SANS in ciliary transport of photoreceptor cells by identifying proteins associated with SANS in transport complexes. In Y2H screen of retinal cDNA library we identified the direct binding of SANS to dynactin-1 (p150Glued), a subunit of the dynacti…

Scaffold proteinRetinal degenerationGeneticsOpsinlcsh:CytologyProtein subunitCiliumCell BiologyBiologymedicine.diseaseOpsin transportCell biologyMicrotubuleRetinitis pigmentosaPoster Presentationmedicinesense organslcsh:QH573-671Cilia
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Evidence for synergistic and complementary roles of Bassoon and darkness in organizing the ribbon synapse

2012

Abstract Ribbon synapses are tonically active high-throughput synapses. The performance of the ribbon synapse is accomplished by a specialization of the cytomatrix at the active zone (CAZ) referred to as the synaptic ribbon (SR). Progress in our understanding of the structure–function relationship at the ribbon synapse has come from observations that, in photoreceptors lacking a full-size scaffolding protein Bassoon ( Bsn Δ Ex 4 / 5 ), dissociation of SRs coincides with perturbed signal transfer. The aim of the present study has been to elaborate the role of Bassoon as a structural organizer of the ribbon synapse and to differentiate it with regard to the ambient lighting conditions. The ul…

Scaffold proteinSynaptic ribbonRetinaGeneral NeuroscienceNerve Tissue ProteinsNanotechnologyDarknessRibbon synapseBiologyMice Mutant StrainsMice Inbred C57BLMicemedicine.anatomical_structureMicroscopy Electron TransmissionArciform densitySynapsesDarknessRibbonmedicineBiophysicsAnimalssense organsActive zonePhotoreceptor Cells VertebrateNeuroscience
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Direct interaction of the Usher syndrome 1G protein SANS and myomegalin in the retina

2011

Contains fulltext : 96822.pdf (Publisher’s version ) (Closed access) The human Usher syndrome (USH) is the most frequent cause of combined hereditary deaf-blindness. USH is genetically heterogeneous with at least 11 chromosomal loci assigned to 3 clinical types, USH1-3. We have previously demonstrated that all USH1 and 2 proteins in the eye and the inner ear are organized into protein networks by scaffold proteins. This has contributed essentially to our current understanding of the function of USH proteins and explains why defects in proteins of different families cause very similar phenotypes. We have previously shown that the USH1G protein SANS (scaffold protein containing ankyrin repeat…

Scaffold proteinUsher syndromePhosphodiesterase 4D interacting protein (PDE4DIP)Muscle ProteinsPlasma protein bindingMice0302 clinical medicineYeastsChlorocebus aethiopsNuclear proteinCells CulturedGenetics0303 health scienceseducation.field_of_studyNuclear ProteinsCell biologyCOS CellssymbolsPhotoreceptor Cells VertebrateProtein BindingMicrotubule based transportNerve Tissue ProteinsBiologyModels BiologicalRetina03 medical and health sciencessymbols.namesakemedicineAnimalsHumanseducationMolecular BiologyAdaptor Proteins Signal Transducing030304 developmental biologyCell BiologyGlycostation disorders [IGMD 4]Golgi apparatusmedicine.diseaseMacaca mulattaMice Inbred C57BLCytoskeletal ProteinsPhotoreceptor cell functionMyomegalinGenetics and epigenetic pathways of disease Functional Neurogenomics [NCMLS 6]CattleAnkyrin repeatCiliary baseIntracellular transport030217 neurology & neurosurgerySensorineuronal degeneration
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MPP1 links the Usher protein network and the Crumbs protein complex in the retina.

2007

Contains fulltext : 53571.pdf (Publisher’s version ) (Closed access) The highly ordered distribution of neurons is an essential feature of a functional mammalian retina. Disruptions in the apico-basal polarity complexes at the outer limiting membrane (OLM) of the retina are associated with retinal patterning defects in vertebrates. We have analyzed the binding repertoire of MPP5/Pals1, a key member of the apico-basal Crumbs polarity complex, that has functionally conserved counterparts in zebrafish (nagie oko) and Drosophila (Stardust). We show that MPP5 interacts with its MAGUK family member MPP1/p55 at the OLM. Mechanistically, this interaction involves heterodimerization of both MAGUK mo…

Scaffold proteinanimal structuresGenetics and epigenetic pathways of disease [NCMLS 6]BioinformaticsPDZ domainMolecular Sequence DataMice TransgenicNerve Tissue ProteinsNeuroinformatics [DCN 3]Models BiologicalRetinaMiceTwo-Hybrid System TechniquesCell polarityPerception and Action [DCN 1]GeneticsNeurosensory disorders [UMCN 3.3]Basal bodyAnimalsHumansAmino Acid SequenceRats WistarEye ProteinsMolecular BiologyZebrafishGenetics (clinical)ActinRenal disorder [IGMD 9]GeneticsExtracellular Matrix ProteinsBinding SitesbiologyModels GeneticCell MembraneMembrane ProteinsGeneral MedicineBlood Proteinsbiology.organism_classificationEmbryo MammalianCell biologyProtein Structure TertiaryRatsGenetic defects of metabolism [UMCN 5.1]Eye disordersense organsCellular energy metabolism [UMCN 5.3]Nucleoside-Phosphate KinaseFunctional Neurogenomics [DCN 2]Neural developmentHuman Molecular Genetics
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Stable Automatic Unsupervised Segmentation of Retinal Vessels Using Self-Organizing Maps and a Modified Fuzzy C-Means Clustering

2011

In this paper an automatic unsupervised method for the segmentation of retinal vessels is proposed. Three features are extracted from the tested image. The features are scaled down by a factor of 2 and mapped into a Self-Organizing Map. A modified Fuzzy C-Means clustering algorithm is used to divide the neuron units of the map in 2 classes. The entire image is again input for the Self-Organizing Map and the class of each pixel will be the class of its best matching unit in the Self-Organizing Map. Finally, the vessel network is post-processed using a hill climbing strategy on the connected components of the segmented image. The experimental evaluation on the DRIVE database shows accurate ex…

Self-organizing mapGround truthPixelSettore INF/01 - Informaticabusiness.industryComputer scienceComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONScale-space segmentationPattern recognitionFuzzy logicComputer visionSegmentationArtificial intelligenceCluster analysisbusinessHill climbingRetinal Vessels Self-Organizing Map Fuzzy C-Means.
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Automatic Unsupervised Segmentation of Retinal Vessels Using Self-Organizing Maps and K-Means Clustering

2011

In this paper an automatic unsupervised method for the segmentation of retinal vessels is proposed. A Self-Organizing Map is trained on a portion of the same image that is tested and K-means clustering algorithm is used to divide the map units in 2 classes. The entire image is again input for the Self-Organizing Map, and the class of each pixel will be the class of the best matching unit on the Self-Organizing Map. Finally, the vessel network is post-processed using a hill climbing strategy on the connected components of the segmented image. The experimental evaluation on the publicly available DRIVE database shows accurate extraction of vessels network and a good agreement between our segm…

Self-organizing mapGround truthSettore INF/01 - InformaticaPixelbusiness.industryComputer scienceComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONk-means clusteringScale-space segmentationPattern recognitionRetinal vessels Self-Organizing Map K-MeansSegmentationComputer visionArtificial intelligenceCluster analysisbusinessHill climbing
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A multiscale approach to automatic and unsupervised retinal vessel segmentation using Self-Organizing Maps

2016

In this paper an automatic unsupervised method for retinal vessel segmentation is described. Self-Organizing Map, modified Fuzzy C-Means, STAPLE algorithms and majority voting strategy were adopted to identify a segmentation of the retinal vessels. The performance of the proposed method was evaluated on the DRIVE database.

Self-organizing mapMajority ruleComputer science0206 medical engineeringComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION02 engineering and technologySelf-organizing mapFuzzy logicCLAHE030218 nuclear medicine & medical imagingRetinal vessel03 medical and health scienceschemistry.chemical_compound0302 clinical medicineMajority votingSegmentationComputer visionComputingMethodologies_COMPUTERGRAPHICSFuzzy C-Mean1707Settore INF/01 - Informaticabusiness.industrySTAPLERetinal020601 biomedical engineeringRetinal vesselHuman-Computer InteractionComputer Networks and CommunicationchemistryAdaptive histogram equalizationArtificial intelligencebusinessSoftware
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Semi-automatic registration of retinal images based on line matching approach

2013

Accurate retinal image registration is essential to track the evolution of eye-related diseases. We propose a semiautomatic method based on features relying upon retinal graphs for temporal registration of retinal images. The features represent straight lines connecting vascular landmarks on the retina vascular tree: bifurcations, branchings, crossings, end points. In the built retinal graph, one straight line between two vascular landmarks indicates that they are connected by a vascular segment in the original retinal image. The locations of the landmarks are manually extracted to avoid the information loss due to errors in a retinal vessels segmentation algorithms. A straight line model i…

Semi-automatic registration of retinal images based on line matching approachGround truthSettore INF/01 - InformaticaMatching (graph theory)Computer sciencebusiness.industryFeature extractionImage registrationRetinalSimilarity measureTree (graph theory)chemistry.chemical_compoundchemistrySegmentationComputer visionArtificial intelligencebusinessProceedings of the 26th IEEE International Symposium on Computer-Based Medical Systems
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Dietary prevention of visual function and cognitive decline by omega-3 polyunsaturated fatty acids in Senescence Accelerated Mouse P8 (SAM P8)

2008

International audience; Purpose: : Neuronal tissues such as the brain and the retina contain elevated amounts of long-chain omega-3 polyunsaturated fatty acids (PUFAs) and particularly docosahexaenoic acid (DHA). DHA concentrations are known to decrease in the aging brain and are associated with cognitive decline. The senescence-accelerated mouse prone 8 (SAM P8) is a mouse model for aging that exhibits deficits in cognitive performances as well as alterations of retinal functionality (ARVO 2004 E-abstract 797). The aim of this study was to evaluate the effects of a dietary supplementation with DHA on mood, cognition and visual functionality of SAM P8 during aging. Methods: : SAM P8 mice we…

Senescencemedicine.medical_specialtyretinagenetic structures[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process Engineeringnutritional factors[SDV]Life Sciences [q-bio][SDV.GEN] Life Sciences [q-bio]/Genetics[SDV.GEN.GA] Life Sciences [q-bio]/Genetics/Animal geneticsBiology03 medical and health sciences0302 clinical medicineInternal medicine[SDV.IDA]Life Sciences [q-bio]/Food engineeringmedicineAging brainWeaning[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringCognitive declinechemistry.chemical_classification[SDV.GEN]Life Sciences [q-bio]/Geneticsagingfood and beveragesFatty acidGeneral Medicine[SDV.IDA] Life Sciences [q-bio]/Food engineering[SDV] Life Sciences [q-bio]Ophthalmology[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsEndocrinologychemistryBiochemistryDocosahexaenoic acid030221 ophthalmology & optometrylipids (amino acids peptides and proteins)Erg030217 neurology & neurosurgeryPolyunsaturated fatty acid
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Nxnl2 splicing results in dual functions in neuronal cell survival and maintenance of cell integrity

2012

International audience; The rod-derived cone viability factors, RdCVF and RdCVF2, have potential therapeutical interests for the treatment of inherited photoreceptor degenerations. In the mouse lacking Nxnl2, the gene encoding RdCVF2, the progressive decline of the visual performance of the cones in parallel with their degeneration, arises due to the loss of trophic support from RdCVF2. In contrary, the progressive loss of rod visual function of the Nxnl2-/- mouse results from a decrease in outer segment length, mediated by a cell autonomous mechanism involving the putative thioredoxin protein RdCVF2L, the second spliced product of the Nxnl2 gene. This novel signaling mechanism extends to o…

Sensory Receptor Cellsgenetic structuresCell SurvivalRNA SplicingSensory system[SDV.GEN] Life Sciences [q-bio]/GeneticsOlfactionBiologyArticleMice03 medical and health sciencesThioredoxins0302 clinical medicineRetinal Rod Photoreceptor CellsGeneticsAnimalsEye ProteinsMolecular BiologyGeneCells CulturedGenetics (clinical)030304 developmental biology[SDV.GEN]Life Sciences [q-bio]/Genetics0303 health sciencesGeneral MedicineAnatomySensory Receptor CellsCell biologyRNA splicingThioredoxinRetinal Rod Photoreceptor Cells030217 neurology & neurosurgeryFunction (biology)Human Molecular Genetics
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