Search results for "Ribosomal protein"

showing 6 items of 36 documents

The Candida albicans UBI3 gene encoding a hybrid ubiquitin fusion protein involved in ribosome biogenesis is essential for growth.

2003

We have constructed a conditional null mutant Candida albicans strain for the UBI3 gene which encodes a ubiquitin fusion protein involved in ribosome biogenesis. A one-step gene disruption procedure, using the plasmid pCaDis, was designed to place the second copy of the UBI3 gene under the control of the tightly regulated MET3 promoter in a C. albicans heterozygous strain (UBI3/Deltaubi3::hisG), previously isolated in the first step of the ura-blaster protocol. Analysis of the conditional null mutant in repressing and inducing conditions indicates that UBI3 is an essential gene whose expression is required for growth of C. albicans.

Ribosomal ProteinsbiologyBase SequenceRecombinant Fusion ProteinsMolecular Sequence DataRibosome biogenesisGeneral Medicinebiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyFusion proteinMolecular biologyCorpus albicansPlasmidUbiquitinEssential geneCandida albicansbiology.proteinCloning MolecularCandida albicansPromoter Regions GeneticGeneRibosomesUbiquitinsPlant ProteinsFEMS yeast research
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Characterization of Streptomyces venezuelae ATCC 10595 rRNA gene clusters and cloning of rrnA

1996

Streptomyces venezuelae ATCC 10595 harbors seven rRNA gene clusters which can be distinguished by BglII digestion. The three rRNA genes present in each set are closely linked with the general structure 16S-23S-5S. We cloned rrnA and sequenced the 16S-23S spacer region and the region downstream of the 5S rRNA gene. No tRNA gene was found in these regions.

Streptomyces venezuelaeMolecular Sequence Data5.8S ribosomal RNADNA RibosomalMicrobiology18S ribosomal RNA5S ribosomal RNASpecies SpecificityRibosomal protein23S ribosomal RNARNA Ribosomal 16SCloning MolecularInternal transcribed spacerMolecular BiologyGeneticsbiologyRNA Ribosomal 5SNucleic Acid HybridizationRNA ProbesRibosomal RNAbiology.organism_classificationMolecular biologyStreptomycesRNA Ribosomal 23SGenes BacterialRNA RibosomalMultigene FamilyResearch ArticleJournal of Bacteriology
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In human endothelial cells rapamycin causes mTORC2 inhibition and impairs cell viability and function.

2008

Aim Drug-eluting stents are widely used to prevent restenosis but are associated with late endothelial damage. To understand the basis for this effect, we have studied the consequences of a prolonged incubation with rapamycin on the viability and functions of endothelial cells. Methods and results Human umbilical vein or aorta endothelial cells were exposed to rapamycin in the absence or in the presence of tumour necrosis factor α (TNFα). After a 24 h-incubation, rapamycin (100 nM) caused a significant cell loss associated with the increase of both apoptosis and necrosis, as quantified by propidium iodide staining, caspase 3 activity, and lactate dehydrogenase release. Rapamycin also impair…

Time FactorsPhysiologyApoptosismTORC1Polymerase Chain Reactionchemistry.chemical_compoundCell MovementStress FibersMicroscopy ConfocalCaspase 3TOR Serine-Threonine KinasesNitric Oxide Synthase Type IIIRibosomal Protein S6 Kinases 70-kDaUp-RegulationEndothelial stem cellmedicine.anatomical_structureBiochemistryCardiology and Cardiovascular MedicineE-SelectinEndotheliumNitric Oxide Synthase Type IIICell SurvivalBlotting WesternEnzyme-Linked Immunosorbent AssayBiologyMechanistic Target of Rapamycin Complex 1Nitric OxideTacrolimusNecrosisTheophyllinePhysiology (medical)medicineHumansImmunoprecipitationViability assayPropidium iodideProtein kinase BAdaptor Proteins Signal TransducingSirolimusDose-Response Relationship DrugL-Lactate DehydrogenaseTumor Necrosis Factor-alphaEndothelial CellsProteinsCardiovascular AgentsRegulatory-Associated Protein of mTORMolecular biologyRapamycin-Insensitive Companion of mTOR ProteinchemistryMultiprotein ComplexesTOR Serine-Threonine KinasesCarrier ProteinsProtein KinasesTranscription FactorsCardiovascular research
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Contact sites of peptide-oligoribonucleotide cross-links identified by a combination of peptide and nucleotide sequencing with MALDI MS.

1997

We have investigated peptide–oligoribonucleotide complexes isolated from cross-linked Escherichia coli 30S ribosomal subunits in order to identify the contact sites of these complexes at the molecular level. For this purpose, reversed-phase (RP) HPLC-purified peptide–oligoribonucleotide complexes were submitted to N-terminal amino acid sequencing in order to determine the cross-linked peptide moiety and were analyzed using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) for calculation of the nucleotide composition of the cross-linked complex. Subsequently, for nucleotide sequence information the complexes were partially hydrolyzed or treated with exonucleases and a…

chemistry.chemical_classificationRibosomal ProteinsBinding SitesBase SequenceChemistryMolecular Sequence DataNucleic acid sequencePeptideRibosomal RNABiochemistryRibosomeAmino acidRNA BacterialBiochemistryBacterial ProteinsRibosomal proteinRNA RibosomalSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationEscherichia coli30SAmino Acid SequencePeptide sequenceJournal of protein chemistry
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Prebiotic polypeptides and the origin of biological information.

1983

Recent data on the origin of biological information are reviewed. These data corroborate the view that polyamino acids were the first informational polymers. The source of information is seen in the chemical reactivity of amino acids, their prebiotic abundance and the prebiotic environment. Evidence is presented in favor of Matsuno's protohypercycle that may have preceded Eigen's hypercycle, but that involves a translation of information from polypeptides into that of polynucleotides.

chemistry.chemical_classificationRibosomal ProteinsModels GeneticPrebioticmedicine.medical_treatmentOrigin of LifeProteinsTranslation (biology)General MedicineBiologyBiological EvolutionAmino acidEnzymesBiochemistrychemistryPolynucleotideProtein BiosynthesisHypercycle (chemistry)medicineAmino AcidsPeptidesEcology Evolution Behavior and SystematicsDie Naturwissenschaften
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Nucleic Acids and Nuclear Proteins

1994

DNA deserves the most attention in any book dealing with molecular variety in animals. The complete genetic information of the organism is encoded in the order of the bases, and with it also is the whole spectrum of genetically determined variation within and between individuals. One can view DNA as a text in which each of the four letters at each position has a unique meaning. Some information and variety is lost en route from the DNA via RNA to the proteins and the complex morphological and physiological characters because only part of the DNA is transcribed into RNA, and not all RNA codes for proteins; furthermore, the genetic code is degenerate and the 64 possible triplet codons define …

chemistry.chemical_classificationchemistry.chemical_compoundchemistryRibosomal proteinNucleic acidRNAEpigeneticsComputational biologyBiologyGenetic codeOrganismDNAAmino acid
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