Search results for "Rotavirus Infections"

showing 10 items of 84 documents

Rotavirus infections, vaccines and virus variability

2014

RotavirusMicrobiology (medical)business.industryRotavirus VaccinesMEDLINEInfantRotavirus InfectionsVirologyRotavirus InfectionsVirusChild PreschoolHumansMedicinebusinessEnfermedades Infecciosas y Microbiología Clínica
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Detection of a porcine-like rotavirus in a child with enteritis in Italy.

2008

ABSTRACT During a 1-year rotavirus surveillance of children hospitalized with acute gastroenteritis in Brescia Hospital, Italy, a chimerical rotavirus strain, G3P[6], was detected, displaying the VP7 and VP4 genes of porcine origin and the NSP4 and VP6 genes of human origin. The reassortant nature of the virus rules out a direct zoonotic event.

RotavirusMicrobiology (medical)virusesMolecular Sequence DataReoviridaeRotavirus InfectionsViral Nonstructural Proteinsmedicine.disease_causeRotavirus InfectionsVirusMicrobiologyEnteritisfluids and secretionsVirologyRotavirusmedicineHumansAmino Acid SequencePhylogenyRecombination GeneticViral Structural ProteinsSequence Homology Amino AcidbiologyPorcine rotavirusInfantvirus diseasesSequence Analysis DNAAcute gastroenteritismedicine.diseasebiology.organism_classificationVirologyEnteritisItalyChild PreschoolRNA ViralSequence Alignment
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Monitoring the rate of hospitalization before rotavirus immunization in Italy utilizing ICD9-CM regional databases

2009

BACKGROUND: Recently, two Rotavirus (RV) vaccines were licensed in Italy, rendering RV illness a vaccine preventable disease. To assess the RV hospitalization rate in Italy, a study focused on the Regional hospital discharge forms (HDD) databases was carried out. RESULTS: Regional HDD databases from Piemonte, Veneto, Friuli-Venezia-Giulia and Marche were analyzed. A total of 434,335 hospitalizations were counted in the study timeframe and 13,234 VE diagnoses (3% of hospitalizations) were collected. A total of 8546 RVE cases (2% of hospitalizations, 64% of all VE) were observed, of which 1.2% were primary diagnoses (PD) and 0.8% secondary diagnosis (SD). The RVE hospitalization peak (4.9%) w…

RotavirusPediatricsmedicine.medical_specialtyDatabases FactualSettore MED/17 - Malattie InfettiveSettore MED/42 - Igiene Generale e ApplicataImmunologymedicine.disease_causecomputer.software_genreimmunizationRotavirus InfectionsHospitalization rateEnteritisrotavirus; immunization; regional databasesRotavirusvaccineMedicineHumansICD9-CMGeneral Pharmacology Toxicology and PharmaceuticsenteritisdatabaserotaviruDatabasebusiness.industryData CollectionInfant NewbornInfantSecondary diagnosismedicine.diseasevaccinationregional databasesRotavirus; enteritis; vaccine; hospitalization; ICD9-CM; databaseVaccinationRegional hospitalImmunizationItalyChild PreschoolbusinesscomputerViral enteritishospitalization
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Evaluation of reverse transcription and polymerase chain reaction (RT/PCR) for the detection of rotaviruses: applications of the assay.

1996

Summary Our aim was to evaluate the reverse transcription and polymerase chain reaction (RT/PCR) technique for the detection of rotavirus shedding by infected children as a routine diagnostic procedure, in comparison to the enzyme-linked immunosorbent assay (ELISA), electron microscopy (EM) and polyacrylamide gel etectrophoresis (PAGE) of rotavirus double stranded RNA. Two-hundred and twenty stool specimens were collected from infants and young children with diarrhoea, and 10–20% faecal suspensions were made. Several methods of rotavirus dsRNA extraction were assayed. Electrophoretic analysis of viral RNA was carried out on 10% polyacrylamide gols followed by silver staining. RT/PCR was per…

RotavirusRT/PCRTranscription GeneticImmunologyReoviridaeEnzyme-Linked Immunosorbent AssayMicroscopic électroniquemedicine.disease_causeSensibilité.Polymerase Chain ReactionSensitivity and SpecificityRotavirus InfectionsArticlelaw.inventionFecesfluids and secretionsSensitivitylawVirologyRotavirusViral analysismedicineElectron microscopyHumansTypingChildRotavirus RT/PCRPolymerase chain reactionbiologyRNAInfantbiology.organism_classificationVirologyMolecular biologyReverse transcriptaseVirus SheddingPAGEMicroscopy ElectronReal-time polymerase chain reactionEvaluation Studies as TopicAnalyse viraleRNA ViralElectrophoresis Polyacrylamide GelELISARNA extractionResearch in virology
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Are Human P[14] Rotavirus Strains the Result of Interspecies Transmissions from Sheep or Other Ungulates That Belong to the Mammalian Order Artiodact…

2009

ABSTRACT A limited number of human G6P[14] rotavirus strains that cause gastroenteritis in humans have been isolated in Europe and Australia. The complete genome sequences were determined for five of these human strains—B10925-97 (isolated in Belgium in 1997), 111/05-27 (Italy, 2005), PA169 (Italy, 1987), MG6 (Australia, 1993), and Hun5 (Hungary, 1997)—and their genetic relatedness to animal rotavirus strains was evaluated by sequencing the complete genome of the sheep rotavirus OVR762 (G8P[14]; Spain, 2002), the guanaco ( Lama guanicoe ) rotavirus strains Arg/Chubut/99 and Arg/Río Negro/98 (G8P[14] and G8P[1], respectively; Argentina, 1999 and 1998), the sable antelope strain RC-18/08 (G6…

RotavirusSequence analysisImmunologyPopulationMolecular Sequence DataReoviridaeSequence HomologyBiologymedicine.disease_causeMicrobiologyDNA sequencingRotavirus InfectionsEvolution MolecularPhylogeneticsVirologyRotavirusGenotypemedicineHumanseducationPhylogenyGeneticseducation.field_of_studyPhylogenetic treeAustraliaInfantSequence Analysis DNAbiology.organism_classificationVirologyGastroenteritisEuropeGenetic Diversity and EvolutionInsect ScienceChild PreschoolRNA Viral
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Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population.

2006

ABSTRACT A rotavirus sample collection from 19 consecutive years was used to investigate the heterogeneity and the dynamics of evolution of G1 rotavirus strains in a geographically defined population. Phylogenetic analysis of the VP7 gene sequences of G1P[8] human rotavirus strains showed the circulation of a heterogeneous population comprising three lineages and seven sublineages. Increases in the circulation of G1 rotaviruses were apparently associated with the introduction of novel G1 strains that exhibited multiple amino acid changes in antigenic regions involved in rotavirus neutralization compared to the strains circulating in the previous years. The emergence and/or introduction of G…

RotavirusSerotypeSettore MED/07 - Microbiologia E Microbiologia ClinicaGenes ViralSettore MED/17 - Malattie InfettiveSequence analysisvirusesLineage (evolution)Molecular Sequence DataImmunologyPopulationViral Nonstructural ProteinsBiologymedicine.disease_causeMicrobiologyRotavirus InfectionsEvolution Molecularfluids and secretionsPhylogeneticsVirologyRotavirusmedicineHumansAmino Acid SequenceLongitudinal StudiesSerotypingeducationAntigens ViralPhylogenyGeneticseducation.field_of_studySequence Homology Amino AcidPhylogenetic treeInfantRNA-Binding Proteinsvirus diseasesVirologyItalyGenetic Diversity and Evolutionrotavirus G1Child PreschoolInsect ScienceCapsid ProteinsSample collection
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Canine-Origin G3P[3] Rotavirus Strain in Child with Acute Gastroenteritis

2007

Infection by an animal-like strain of rotavirus (PA260/97) was diagnosed in a child with gastroenteritis in Palermo, Italy, in 1997. Sequence analysis of VP7, VP4, VP6, and NSP4 genes showed resemblance to a G3P[3] canine strain identified in Italy in 1996. Dogs are a potential source of human viral pathogens.

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaDisease reservoircanine rotavirusEpidemiologyvirusesSequence Homologylcsh:Medicinemedicine.disease_causePolymerase Chain Reactionlaw.inventionfluids and secretionslawZoonosesRotavirushuman rotavirusGenotypePotential sourceDog DiseasesRotavirusG3P[3] VP7 VP4PhylogenyPolymerase chain reactionStrain (chemistry)Dispatchvirus diseasesGastroenteritisVP7Infectious DiseasesChild PreschoolVP4Acute DiseaseVP6Microbiology (medical)GenotypeNSP4Sequence analysisBiologyRotavirus Infectionslcsh:Infectious and parasitic diseasesMicrobiologyDogsSpecies SpecificitymedicineAnimalsHumanslcsh:RC109-216G3P[3] genotypeDisease Reservoirslcsh:RAcute gastroenteritisVirologyEmerging Infectious Diseases
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Full-genome sequencing of a Hungarian canine G3P[3] Rotavirus A strain reveals high genetic relatedness with a historic Italian human strain

2015

A canine Rotavirus A strain was identified in the fecal specimen of a young dog during 2012 in Hungary. The strain RVA/Dog-wt/HUN/135/2012/G3P[3] shared complete genotype constellation (G3-P[3]-I3-R3-C3-M3-A15-N2-T3-E3-H6) and high genome sequence similarity (nt, 98.8 %) with a historic human strain, RVA/Human-tc/ITA/PA260-97/1997/G3P[3]. This study provides evidence for the canine origin of the unusual NSP1 genotype, A15, and reinforces the hypothesis of direct interspecies transmission of canine rotaviruses to humans.

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaGenotype constellationMolecular Sequence DataGenome ViralBiologymedicine.disease_causeGenomeRotavirus InfectionsViral ProteinsDogsPhylogenetic analysiGeneticPhylogeneticsZoonosiSequence Homology Nucleic AcidRotavirusSemiconductor sequencingVirologyGenotypeGeneticsmedicineAnimalsHumansDog DiseasesMolecular BiologyPhylogenyGeneticsWhole genome sequencingHungaryNSP1Base SequenceStrain (biology)General MedicineIon semiconductor sequencingVirologyItaly
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Emergence in 2017-2019 of novel reassortant equine-like G3 rotavirus strains in Palermo, Sicily.

2021

Rotavirus A (RVA) is a major etiologic agent of gastroenteritis in children worldwide. Hospital-based surveillance of viral gastroenteritis in paediatric population in Palermo (Italy) from 2017 onwards revealed a sharp increase in G3P[8] RVAs, accounting for 71% of all the RVAs detected in 2019. This pattern had not been observed before in Italy, with G3 RVA usually being detected at rates lower than 3%. In order to investigate this unique epidemiological pattern, the genetic diversity of G3 RVAs identified during a 16-year long surveillance (2004-2019) was explored by systematic sequencing of the VP7 and VP4 genes and by whole genome sequencing of selected G3 strains, representative of the…

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaGenotype040301 veterinary sciencesvirusesGenome ViralBiologymedicine.disease_causeGenomeRotavirus Infections0403 veterinary science03 medical and health sciencesHuman healthRotavirusmedicineAnimalsHumansHorsesGeneSicilyPhylogeny030304 developmental biologyWhole genome sequencingacute gastroenteritis DS-1 like genetic backbone equine-like G3P[8] Italy rotaviruswhole genome sequencing0303 health sciencesGenetic diversityGeneral VeterinaryGeneral Immunology and MicrobiologyPhylogenetic treevirus diseases04 agricultural and veterinary sciencesGeneral MedicineVirologyHorse DiseasesReassortant VirusesPaediatric populationTransboundary and emerging diseasesREFERENCES
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Evolution of DS-1-like human G2P[4] rotaviruses assessed by complete genome analyses

2013

Group A rotaviruses (RVAs) are a leading cause of viral gastroenteritis in children, with G2P[4] RVA being one of the most common human strain worldwide. The complete genome sequences of nine G2P[4] RVA strains, selected from a 26-year archival collection (1985-2011) established in Palermo/Italy, were determined. A strain associated with a peak of G2P[4] RVA activity in 1996 resembled a reassortant strain identified in Kenya in 1982 and completely differed in the genomic make up from more recent strains that circulated during 2004-2011. Conversely, the 2004-2011 G2P[4] RVAs were genetically more similar to contemporary RVA strains circulating globally. Recent G2P[4] strains possessed either…

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaMolecular Sequence DataReassortmentSequence alignmentGenome ViralBiologymedicine.disease_causeGenomeRotavirus InfectionsEvolution MolecularViral ProteinsPhylogeneticsVirologyRotavirusGenotypemedicineHumansAmino Acid SequencePeptide sequencePhylogenyGeneticsRotavirus G2P[4] evolution ItalyStrain (biology)VirologyItalySequence AlignmentJournal of General Virology
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