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Accounting for species interactions is necessary for predicting how arctic arthropod communities respond to climate change

2021

Species interactions are known to structure ecological communities. Still, the influence of climate change on biodiversity has primarily been evaluated by correlating individual species distributions with local climatic descriptors, then extrapolating into future climate scenarios. We ask whether predictions on arctic arthropod response to climate change can be improved by accounting for species interactions. For this, we use a 14-year-long, weekly time series from Greenland, resolved to the species level by mitogenome mapping. During the study period, temperature increased by 2 degrees C and arthropod species richness halved. We show that with abiotic variables alone, we are essentially un…

0106 biological sciencesClimate ResearchArthropodaBiodiversityClimate changeAccounting010603 evolutionary biology01 natural sciencesArcticniveljalkaisetTrophic cascade1172 Environmental sciencesEcology Evolution Behavior and SystematicsTrophic levelAbiotic componentarktinen alueEcologyfood webEcologybusiness.industry010604 marine biology & hydrobiologyeliöyhteisötilmastonmuutokset15. Life on landFood webjoint species distribution modelbiodiversiteettitrophic cascadeclimate changeGeographyArctic13. Climate actioncommunity assemblySpecies richnessbusinessravintoverkotEcography
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Synchronous attack is advantageous: mixed genotype infections lead to higher infection success in trematode parasites

2011

Co-infecting parasite genotypes typically compete for host resources limiting their fitness. The intensity of such competition depends on whether parasites are reproducing in a host, or using it primarily as a transmission vehicle while not multiplying in host tissues (referred to as ‘competition hypothesis’). Alternatively, simultaneous attack and co-infection by several parasite genotypes might facilitate parasite infection because such a diverse attack could present an additional challenge to host immune defence (referred to as ‘facilitation hypothesis’). We tested the competition hypothesis by comparing the production of transmission stages (cercariae) from snails infected with one or …

0106 biological sciencesCompetitive BehaviorGenotypemedia_common.quotation_subjectZoologyTrematode InfectionsBiology010603 evolutionary biology01 natural sciencesPolymerase Chain ReactionGeneral Biochemistry Genetics and Molecular BiologyCompetition (biology)Host-Parasite Interactions03 medical and health sciencesGenotypeParasite hostingAnimalsCercariaResearch ArticlesFinland030304 developmental biologyGeneral Environmental Sciencemedia_commonLymnaea0303 health sciencesAnalysis of VarianceGeneral Immunology and MicrobiologyHost (biology)Transmission (medicine)ReproductionGenetic VariationGeneral Medicinebiology.organism_classificationObligate parasiteOncorhynchus mykissImmunologyFacilitationTrematodaTrematodaGeneral Agricultural and Biological SciencesProceedings of the Royal Society B-Biological Sciences
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Resource polymorphism in European whitefish: Analysis of fatty acid profiles provides more detailed evidence than traditional methods alone

2019

Published version, licensed CC BY-NC-ND 4.0. , available at: http://dx.doi.org/10.1371/journal.pone.0221338 Resource polymorphism—whereby ancestral generalist populations give rise to several specialised morphs along a resource gradient—is common where species colonise newly formed ecosystems. This phenomenon is particularly well documented in freshwater fish populations inhabiting postglacial lakes formed at the end of the last ice age. However, knowledge on how such differential exploitation of resources across contrasting habitats might be reflected in the biochemical compositions of diverging populations is still limited, though such patterns might be expected. Here, we aimed to assess …

0106 biological sciencesComposite ParticlesMarine and Aquatic SciencesPredationGeneralist and specialist species01 natural sciencesFood chainIsotopesvatsaFood Web StructurelakesMedicine and Health SciencesCoregonus albulaVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497Trophic levelMultidisciplinaryEcologyfood.dishPhysicsStable IsotopesQStomachREukaryotafood web structureselkärangattomatGastrointestinal Contents6. Clean waterFood webTrophic InteractionsFreshwater FishCommunity Ecologyfreshwater fishVertebratesPhysical Sciencesresource polymorphismFreshwater fishMedicinepredationAnatomyNutritive ValueSalmonidaestomachResearch ArticleFreshwater EnvironmentsAtomsFAFood ChainSciencestable isotopesZoologyScandinavian and Nordic CountriesCoregonus lavaretusBiologyfatty acidsjärvet010603 evolutionary biologyfoodCoregonus lavaretusAnimals14. Life underwaterParticle PhysicsravintoketjutVDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920Coregonus albulatrophic interactionsEcological nicheisotoopit010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsAquatic EnvironmentsBiology and Life SciencesFeeding BehaviorBodies of WaterVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497invertebratesbiology.organism_classificationInvertebratessaalistusGastrointestinal TractLakesFishEuropean whitefishsiikaEarth SciencesDigestive SystemravintoverkotPLOS ONE
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Resource Partitioning in Food, Space and Time between Arctic Charr (Salvelinus alpinus), Brown Trout (Salmo trutta) and European Whitefish (Coregonus…

2017

Arctic charr and European whitefish are considered to be strong competitors in lakes, with the latter usually being the superior species. However, high niche plasticity and lake morphometry may suggestively facilitate resource partitioning and coexistence between charr and whitefish. Here, we explore the trophic niche utilization (diet and habitat use) of charr and whitefish co-occurring with brown trout in the deep and oligotrophic Lake Fyresvatnet, southern Norway (59˚05’N, 8˚10’E). Using CPUE, stomach contents and stable isotope analyses, a distinct resource partitioning was revealed between brown trout and the other two species. Brown trout typically occupied the littoral zone, feeding …

0106 biological sciencesComposite ParticlesTroutlcsh:MedicineMarine and Aquatic Sciences01 natural sciencesBrown troutIsotopesVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 497Salmolcsh:ScienceMultidisciplinarybiologyfood.dishEcologyEcologyNorwayPhysicsStable IsotopescoexistenceFishesPlanktonGastrointestinal ContentsTrophic InteractionsrinnakkaiseloFreshwater FishArctic charrTroutCommunity EcologyOsteichthyesVertebratesPhysical SciencesFreshwater fishEcological NichesSalmonidaeResearch ArticleFreshwater EnvironmentsAtoms010603 evolutionary biologyZooplanktonfoodCoregonus lavaretusAnimalsProfundal zoneParticle PhysicsSalmonidaeEcosystemSalvelinus010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesAquatic EnvironmentsFeeding BehaviorVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497Bodies of Waterbiology.organism_classificationInvertebratesLakesFoodEuropean whitefishEarth Sciencesta1181lcsh:Q
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Accounting for preferential sampling in species distribution models

2019

D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…

0106 biological sciencesComputer scienceQH301 BiologySpecies distributionPoint processesStochastic partial differential equation01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_6774EspèceAbundance (ecology)StatisticsPesqueríasQAOriginal Researchhttp://aims.fao.org/aos/agrovoc/c_241990303 health sciencesEcologyU10 - Informatique mathématiques et statistiquesSampling (statistics)Integrated nested Laplace approximationstochastic partial differential equationVariable (computer science)symbolsÉchantillonnageSpecies Distribution Models (SDMs)Modèle mathématiqueBayesian probabilityNDASDistribution des populations010603 evolutionary biologyQH30103 medical and health sciencessymbols.namesakeCovariateQA MathematicsSDG 14 - Life Below WaterCentro Oceanográfico de Murciaspecies distribution modelsRelative species abundanceEcology Evolution Behavior and Systematicspoint processes030304 developmental biologyNature and Landscape Conservationhttp://aims.fao.org/aos/agrovoc/c_6113http://aims.fao.org/aos/agrovoc/c_7280Markov chain Monte Carlointegrated nested Laplace approximationU30 - Méthodes de rechercheBayesian modelling
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Degradation in landscape matrix has diverse impacts on diversity in protected areas.

2017

Introduction: A main goal of protected areas is to maintain species diversity and the integrity of biological assemblages. Intensifying land use in the matrix surrounding protected areas creates a challenge for biodiversity conservation. Earlier studies have mainly focused on taxonomic diversity within protected areas. However, functional and especially phylogenetic diversities are less studied phenomena, especially with respect to the impacts of the matrix that surrounds protected areas. Phylogenetic diversity refers to the range of evolutionary lineages, the maintenance of which ensures that future evolutionary potential is safeguarded. Functional diversity refers to the range of ecologic…

0106 biological sciencesConservation geneticsConservation BiologyBiodiversitylcsh:MedicinemaankäyttöForestsAnimal Phylogenetics01 natural scienceslcsh:ScienceSpecies diversityConservation ScienceData ManagementMultidisciplinaryEcologyEcologyEukaryotaBiodiversityrespiratory systemta4112Terrestrial EnvironmentsPhylogeneticsGeographyHabitatVertebratesConservation GeneticsConservation geneticsResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEcological MetricsForest managementAnimal phylogenetics010603 evolutionary biologyEcosystemsBirdssuojelualueetGeneticsAnimalsEcosystemEvolutionary SystematicsEcosystemTaxonomyEvolutionary BiologyLand use010604 marine biology & hydrobiologyEcology and Environmental Scienceslcsh:ROrganismsSpecies diversityland useBiology and Life SciencesSpecies Diversity15. Life on landbiodiversiteettiPhylogenetic diversity13. Climate actionConservation scienceAmniotesta1181lcsh:Qprotected areasZoologyhuman activitiesPLoS ONE
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

2013

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License.-- et al.

0106 biological sciencesConservation geneticsMalegenotype phenotype correlationGorillaComputingMilieux_LEGALASPECTSOFCOMPUTINGarginineGenoma humà01 natural sciencesOculocutaneous albinism type 4single nucleotide polymorphismAlbinismegenetic variabilityGorillaInbreedinggenetic conservationGenetics0303 health sciencesGenomebiologyarticlecopy number variationHigh-Throughput Nucleotide SequencingSLC45A2 geneGenomicszygosityOculocutaneous albinismFloquet de neu (Goril·la)AlbinismFemaleBiotechnologyamino acid substitutionResearch ArticleSLC45A2Gorilla gorilla gorillaHeterozygoteAlbinismMolecular Sequence Datacomparative genomic hybridizationgene sequenceConservation010603 evolutionary biology03 medical and health sciencesWestern lowland gorillabiology.animalmedicineGeneticsheterozygosityAnimalsAmino Acid Sequencegene030304 developmental biologygene identificationWhole genome sequencingnonhumanGorilla gorillaMembrane Transport ProteinsSequence Analysis DNA15. Life on landbiology.organism_classificationmedicine.diseaseGenòmicaData_GENERALMutationbiology.proteinGenèticaoculocutaneous albinismglycineMicrosatellite RepeatsBMC Genomics
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Covariation in population trends and demography reveals targets for conservation action

2021

Wildlife conservation policies directed at common and widespread, but declining, species are difficult to design and implement effectively, as multiple environmental changes are likely to contribute to population declines. Conservation actions ultimately aim to influence demographic rates, but targeting actions towards feasible improvements in these is challenging in widespread species with ranges that encompass a wide range of environmental conditions. Across Europe, sharp declines in the abundance of migratory landbirds have driven international calls for action, but actions that could feasibly contribute to population recovery have yet to be identified. Targeted actions to improve condit…

0106 biological sciencesConservation of Natural ResourcesdemographyproductivityRange (biology)PopulationPopulation DynamicsWildlifemigration010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology010605 ornithologypopulation trendsBirdsAbundance (ecology)AnimalseducationProductivityResearch ArticlesGeneral Environmental ScienceWildlife conservationInternational calleducation.field_of_studyGeneral Immunology and MicrobiologyEcology:Samfunnsvitenskap: 200 [VDP]conservationGeneral Medicine15. Life on landEuropeGeographyAction (philosophy)1181 Ecology evolutionary biologyAnimal MigrationGeneral Agricultural and Biological SciencesDemography
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Cost-efficiency assessments of marine monitoring methods lack rigor—a systematic mapping of literature and an end-user view on optimal cost-efficienc…

2021

Global deterioration of marine ecosystems, together with increasing pressure to use them, has created a demand for new, more efficient and cost-efficient monitoring tools that enable assessing changes in the status of marine ecosystems. However, demonstrating the cost-efficiency of a monitoring method is not straightforward as there are no generally applicable guidelines. Our study provides a systematic literature mapping of methods and criteria that have been proposed or used since the year 2000 to evaluate the cost-efficiency of marine monitoring methods. We aimed to investigate these methods but discovered that examples of actual cost-efficiency assessments in literature were rare, contr…

0106 biological sciencesCost effectivenessComputer scienceenvironmental effectsCost-efficiency analysiscostsmeriensuojeluCost of monitoringmonitorointimuutos010501 environmental scienceskäyttömarine monitoring tool01 natural sciencesympäristön tilakartoitusresearch methodsmethod performancestandardointichangestate of the environmentmerenkulkijatMonitoring methodsmappingmarinersReliability (statistics)General Environmental Scienceevaluationcost effectivenessCost efficiencyMarine monitoring toolComparabilityvesiekosysteemitGeneral MedicinetrackingPollutionkustannuksetmittausmenetelmätRisk analysis (engineering)ympäristövaikutuksetenvironmental changesCosts and Cost AnalysisecosystemsmeretEnvironmental Monitoringmethod standardizationevaluation methodsarviointimenetelmätOptimal costseasManagement Monitoring Policy and LawloppukäyttäjätArticlemethodsmenetelmättutkimusmenetelmätseurantaekologinen tila14. Life underwaterEcosystem0105 earth and related environmental sciencesEnd user010604 marine biology & hydrobiologyReproducibility of ResultskustannustehokkuusMethod standardizationecosystems (ecology)cost of monitoringTerm (time)ekosysteemit (ekologia)monitoringcost-efficiency analysiskustannus-hyötyanalyysiMethod performanceusearviointiEnvironmental Monitoring and Assessment
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Binding Site Alteration Is Responsible for Field-Isolated Resistance to Bacillus thuringiensis Cry2A Insecticidal Proteins in Two Helicoverpa Species

2010

Background Evolution of resistance by target pests is the main threat to the long-term efficacy of crops expressing Bacillus thuringiensis (Bt) insecticidal proteins. Cry2 proteins play a pivotal role in current Bt spray formulations and transgenic crops and they complement Cry1A proteins because of their different mode of action. Their presence is critical in the control of those lepidopteran species, such as Helicoverpa spp., which are not highly susceptible to Cry1A proteins. In Australia, a transgenic variety of cotton expressing Cry1Ac and Cry2Ab (Bollgard II) comprises at least 80% of the total cotton area. Prior to the widespread adoption of Bollgard II, the frequency of alleles conf…

0106 biological sciencesCrops AgriculturalInsecticidesHelicoverpa punctigeraScienceUNESCO::CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Entomología generalBacillus thuringiensisBacterial ProteinGenetically modified cropsHelicoverpa armigera01 natural sciencesMicrobiologyLepidoptera genitaliaInsecticide Resistance03 medical and health sciencesBacterial ProteinsBacillus thuringiensisBotanyBacillus thuringiensiBiotechnology/Applied MicrobiologyAnimalsMode of actionBiotechnology/Plant BiotechnologyHelicoverpaInsecticide030304 developmental biology0303 health sciencesMultidisciplinaryBinding SitesbiologyAnimalQfungiBinding SiteRbiology.organism_classificationBinding site alterationHelicoverpa speciesLepidoptera010602 entomologyCry1AcBacillus thuringiensis; Binding site alteration; Helicoverpa speciesMedicine:CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Entomología general [UNESCO]Plant Biology/Agricultural BiotechnologyResearch ArticleProtein BindingPLoS ONE
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