Search results for "SEW"

showing 10 items of 885 documents

What happens in hospitals does not stay in hospitals: antibiotic-resistant bacteria in hospital wastewater systems.

2016

Hospitals are hotspots for antimicrobial-resistant bacteria (ARB) and play a major role in both their emergence and spread. Large numbers of these ARB will be ejected from hospitals via wastewater systems. In this review, we present quantitative and qualitative data of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli, vancomycin-resistant enterococci and Pseudomonas aeruginosa in hospital wastewaters compared to community wastewaters. We also discuss the fate of these ARB in wastewater treatment plants and in the downstream environment. Published studies have shown that hospital effluents contain ARB, the burden of these bacteria being dependent on their local prevalence. The…

0301 basic medicineMicrobiology (medical)030106 microbiologyWastewater010501 environmental sciencesurologic and male genital diseasesmedicine.disease_cause01 natural sciencesbeta-LactamasesVancomycin-Resistant EnterococciWater Purification03 medical and health sciencesAntibiotic resistance[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyDrug Resistance BacterialEscherichia colimedicineHumansVancomycin-resistant EnterococcusSelection GeneticEffluentComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesPseudomonas aeruginosabusiness.industryGeneral MedicineAntimicrobialHospitals6. Clean waterAnti-Bacterial Agents3. Good healthBiotechnologyMultiple drug resistanceInfectious Diseases[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyWastewater13. Climate actionPseudomonas aeruginosaSewage treatmentbusiness
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Epidemiological Surveillance of Norovirus and Rotavirus in Sewage (2016–2017) in Valencia (Spain)

2020

© 2020 by the authors.

0301 basic medicineMicrobiology (medical)RotavirusVeterinary medicineGenotypingVirus RNA030106 microbiologyPopulationSewagenorovirusMicroorganismesBiologymedicine.disease_causeMicrobiologyArticle03 medical and health sciencesAigües residuals MicrobiologiaVirologyRotavirusGenotypemedicinesewageeducationGenotypinglcsh:QH301-705.5education.field_of_studyMolecular epidemiologySewagebusiness.industryNorovirus030104 developmental biologyrotaviruslcsh:Biology (General)genotypingNorovirusbusinessViral load
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Early detection of SARS-CoV-2 infection cases or outbreaks at nursing homes by targeted wastewater tracking

2021

Objectives Near-source tracking of SARS-CoV-2 RNA in the sewage drains serving particular buildings may allow rapid identification of SARS-CoV-2 infection cases or local outbreaks. In this pilot study, we investigated whether this was the case for nursing homes (NH). Methods The study involved five NH (from A to E) affiliated to the Clínico-Malvarrosa Health Department, Valencia (Spain). These were nursing or mixed nursing/care homes of different sizes, altogether providing care for 472 residents attended by a staff of 309. Near-source sewage samples were screened for presence of SARS-CoV-2 RNA by RT-qPCR at least 5 days per week during the study period. SARS-CoV-2 RNA testing in nasopharyn…

0301 basic medicineMicrobiology (medical)medicine.medical_specialtyCOVID-19 outbreakCoronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)030106 microbiologyNursing homesEarly detectionSewageWastewater03 medical and health sciences0302 clinical medicinemedicineHumans030212 general & internal medicineSanitary sewerskin and connective tissue diseasesLetter to the EditorAgedSARS-CoV-2business.industryfungiCOVID-19OutbreakGeneral MedicineSARS-CoV-2 RNANursing Homesbody regionsInfectious DiseasesWastewaterEmergency medicineWater MicrobiologyNursing homesbusinessNear-source tracking
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Optimization of PMAxx pretreatment to distinguish between human norovirus with intact and altered capsids in shellfish and sewage samples

2018

Shellfish contamination by human noroviruses (HuNoVs) is a serious health and economic problem. Recently an ISO procedure based on RT-qPCR for the quantitative detection of HuNoVs in shellfish has been issued, but these procedures cannot discriminate between inactivated and potentially infectious viruses. The aim of the present study was to optimize a pretreatment using PMAxx to better discriminate between intact and heat-treated HuNoVs in shellfish and sewage. To this end, the optimal conditions (30 min incubation with 100 μM of PMAxx and 0.5% of Triton, and double photoactivation) were applied to mussels, oysters and cockles artificially inoculated with thermally-inactivated (99 °C for 5 …

0301 basic medicineOyster030106 microbiologyIntercalating dyesSewageGenome ViralReal-Time Polymerase Chain Reactionmedicine.disease_causeMicrobiologyMicrobiology03 medical and health sciencesCapsidbiology.animalmedicineAnimalsHumansColoring AgentsShellfishShellfish2. Zero hungerInfectivityComplex matrixbiologyViability PCRSewagebusiness.industryNorovirusRT-qPCRGeneral MedicineContamination6. Clean water3. Good health030104 developmental biologyCapsidNorovirusbusinessFood Science
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Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Gene…

2017

International audience; Rivers are often challenged by fecal contaminations. The barrier effect of sediments against fecal bacteria was investigated through the use of a microbial source tracking (MST) toolbox, and by Next Generation Sequencing (NGS) of V5-V6 16S rRNA gene (rrs) sequences. Non-metric multi-dimensional scaling analysis of V5-V6 16S rRNA gene sequences differentiated bacteriomes according to their compartment of origin i.e., surface water against benthic and hyporheic sediments. Classification of these reads showed the most prevalent operating taxonomic units (OTU) to be allocated to Flavobacterium and Aquabacterium. Relative numbers of Gaiella, Haliangium, and Thermoleophilu…

0301 basic medicinePollutionMicrobiology (medical)benthic and hyporheic sedimentsmedia_common.quotation_subject[SDV]Life Sciences [q-bio]030106 microbiologyFECA CONTAMINATIONBiologyMicrobiologyarn ribosomal 16s03 medical and health sciencesperi-urban riverzone hyporhéique14. Life underwatermedia_commonOriginal ResearchEcologyBENTHIC AND HYPORHEIC SEDIMENTSMICROBIAL COMMUNITYHIGH THROUGH PUT SEQUENCING (HTS)zone benthiquebiology.organism_classification6. Clean waterFecal coliformAquabacteriumhigh throughput sequencing (HTS)Microbial population biology13. Climate actionBenthic zonefecal contaminationperi-urban river;benthic and hyporheic sediments;microbial community;high throughput sequencing (HTS);fecal contaminationcontamination biologiquePERI-URBAN RIVERCombined sewermicrobial communitySurface waterFlavobacterium
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Molecular Characterization of Coxsackievirus B5 Isolates from Sewage, Italy 2016–2017

2019

Hereby, the partial Viral Protein 1 sequences of Coxsackievirus B5 (CV-B5) from sewage samples, collected in Italy from 2016 to 2017, were compared with those available in GenBank from clinical samples. Phylogenetic analysis highlighted: (I) the predominant circulation of CV-B5 genogroup B in Italy, and (II) the presence of two new sub-genogroups.

0301 basic medicineSettore MED/07 - Microbiologia E Microbiologia ClinicaEpidemiologyViral proteinHealth Toxicology and Mutagenesisviruses030106 microbiologySewage010501 environmental sciencesBiologyCoxsackievirusmedicine.disease_causeBrief Communication01 natural sciences03 medical and health sciencesViral ProteinsPhylogenetic analysiNon-polio enterovirusePhylogeneticsVirologymedicineCoxsackievirusPhylogeny0105 earth and related environmental sciencesPoliovirusePhylogenetic analysisCV-B5Phylogenetic treeSewagebusiness.industryvirus diseasesNon-polio enterovirusesbiology.organism_classificationVirologyEnterovirus B HumanItalyGenBankPoliovirusesCoxsackievirubusinessFood ScienceEnvironmental Monitoring
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Hepatitis E virus in lettuce and water samples: A method-comparison study

2017

The hepatitis E virus (HEV), which is an increasing cause of acute viral hepatitis in Europe, is a zoonotic virus that is mainly transmitted through contaminated water, consumption of raw or undercooked meat from pigs or wild boar, blood transfusion, and organ transplantation. Although the role of HEV transmission through contaminated produce has not been confirmed, the presence of HEV has been reported in irrigation waters and in vegetables. The present study used a World Health Organization (WHO) international standard and clinical samples to evaluate the performance characteristics of three RT-qPCR assays for detection and quantification of HEV. Two of the evaluated assays provided good …

0301 basic medicineVeterinary medicineIrrigationMeatSwine030106 microbiologySewageReal-Time Polymerase Chain Reactionmedicine.disease_causeMicrobiology03 medical and health sciencesWild boarHepatitis E virusSpinacia oleraceabiology.animalPepperVegetablesHepatitis E virusmedicineAnimalsHumansDetection limitbiologySewagebusiness.industryWater PollutionRT-qPCRGeneral MedicineLettuceContaminationIrrigation watermedicine.diseaseHepatitis EEuropeHEVRNA ViralCapsicumViral hepatitisbusinessFoodborne virusFood Science
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Subnational mapping of HIV incidence and mortality among individuals aged 15-49 years in sub-Saharan Africa, 2000-18: a modelling study

2021

Background. High-resolution estimates of HIV burden across space and time provide an important tool for tracking and monitoring the progress of prevention and control efforts and assist with improving the precision and efficiency of targeting efforts. We aimed to assess HIV incidence and HIV mortality for all second-level administrative units across sub-Saharan Africa. Methods. In this modelling study, we developed a framework that used the geographically specific HIV prevalence data collected in seroprevalence surveys and antenatal care clinics to train a model that estimates HIV incidence and mortality among individuals aged 15–49 years. We used a model-based geostatistical framework to e…

0301 basic medicinesub-Saharan AfricaMaleHIV AntibodieEpidemiologyHIV incidencesHIV Infectionsmortality rateHIV AntibodiesModelling studyHuman immunodeficiency virus prevalence0302 clinical medicineAfrica NorthernRA0421Seroepidemiologic StudiesMedicineNorthernHIV Infection030212 general & internal medicineYoung adult10. No inequalityuncertaintyMozambique11 Medical and Health SciencesHIV mortalityMortality rateIncidence (epidemiology)Incidence1. No povertyHiv incidencearticleMauritaniaHuman immunodeficiency virus infected patientArticlestrackingMiddle Agedhealth care planning3. Good healthPeer reviewLesothoAIDSInfectious DiseasesQR180A990 Medicine and Dentistry not elsewhere classifiedFemaleprenatal careanti human immunodeficiency virus agentseroepidemiologyHumanAdultAdolescentAnti-HIV AgentsImmunologyantiretroviral therapyUnit (housing)03 medical and health sciencesYoung AdultbloodHuman immunodeficiency virus infectionVirologySeroprevalenceHumanshumanDeveloping CountriesEstimationAcquired Immunodeficiency SyndromeSubnational mappingsbusiness.industrySeroepidemiologic StudieHIVAnti-HIV AgentPREVENTION030112 virologymortalitymonitoring3121 General medicine internal medicine and other clinical medicineHuman immunodeficiency virus antibodyAfricabusinessHIV incidence ; HIV mortality ; Subnational mapping ; Sub-Saharan Africa ; Local burden of disease ; Public healthDemography
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Improving efficiency of viability-qPCR for selective detection of infectious HAV in food and water samples.

2017

Aim: To improve the efficacy of intercalating dyes to distinguishing between infectious and inactivated hepatitis A virus (HAV) in food. Methods and Results: Different intercalating dyes were evaluated for the discrimination between infectious and thermally inactivated HAV suspensions combining with the RT‐qPCR proposed in the ISO 15216. Among them, PMAxx was the best dye in removing the RT‐qPCR signal from inactivated HAV. Applied to lettuce and spinach, PMAxx–Triton pretreatment resulted in complete removal of the RT‐qPCR signal from inactivated HAV. Likewise, this study demonstrates that this pretreatment is suitable for the discrimination of inactivated HAV in shellfish without further …

0301 basic medicineviruses030106 microbiologyBiologyWastewaterReal-Time Polymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiology03 medical and health sciencesSpinacia oleraceaVegetablesAnimalsSample dilutionInfectious virusShellfishShellfishInfectivityViability PCRSewageInoculationfungivirus diseasesWaterGeneral MedicineLettuceOstreidaeHepatitis a virusdigestive system diseasesBivalvia030104 developmental biologyFoodFood MicrobiologyRNA ViralHepatitis A virusBiotechnologyJournal of applied microbiology
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Teacher preparation for inclusion in Norway: a study of beliefs, skills, and intended practices

2017

ABSTRACTThe aim of this study was to examine the relationship between the educational experiences of teacher education students and their attitudes towards planning and making adaptations for children with learning disabilities in inclusive classrooms. Participants comprised pre-service teachers in the second and fourth years of teacher preparation at a major Norwegian university. Fourth-year students were completing a 1-year elective in special education (n = 34) or coursework in other subjects (n = 30). Second-year students were grouped based on their intention to take special education (n = 26) or other coursework (n = 62). Participants rated their beliefs, skills, and intended practices…

030506 rehabilitationbusiness.industry05 social sciences050301 educationGeneral educationNorwegianSpecial educationlanguage.human_languageTeacher educationEducation03 medical and health sciencesTeacher preparationArts and Humanities (miscellaneous)CourseworkLearning disabilitylanguageMathematics educationmedicinemedicine.symptom0305 other medical sciencebusiness0503 educationInclusion (education)International Journal of Inclusive Education
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