Search results for "SMIS"

showing 10 items of 2316 documents

Full and Partial Agonism of Ionotropic Glutamate Receptors Indicated by Molecular Dynamics Simulations

2011

Ionotropic glutamate receptors (iGluRs) are synaptic proteins that facilitate signal transmission in the central nervous system. Extracellular iGluR cleft closure is linked to receptor activation; however, the mechanism underlying partial agonism is not entirely understood. Full agonists close the bilobed ligand-binding domain (LBD), while antagonists prevent closure; the transmembrane ion channel either opens or stays closed, respectively. Although some bulky partial agonists produce intermediate iGluR-LBD closure, the available crystal structures also imply that the cleft can be shut with certain partial agonists. Recently, we have shown that the iGluR-LBD closure stage can be recreated b…

Binding SitesProtein ConformationStereochemistryChemistryGeneral Chemical EngineeringGlutamate receptorHydrogen BondingGeneral ChemistryMolecular Dynamics SimulationLibrary and Information SciencesNeurotransmissionCrystallography X-RayLigandsReceptors Ionotropic GlutamateLigand (biochemistry)Partial agonistTransmembrane proteinComputer Science ApplicationsBiophysicsReceptorIon channelProtein BindingIonotropic effectJournal of Chemical Information and Modeling
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Wolbachia (alphaproteobacteria: rickettsiales) infections in isolated aphid populations from oceanic islands of the Azores archipelago: revisiting th…

2019

Aphids (Hemiptera: Aphididae) have provided a suitable model to study endosymbionts, their community, and dynamics since the discovery of the obligate endosymbiont Buchnera aphidicola in these organisms. In previous studies, Wolbachia was found in some aphid species. In the present study, we report the prevalence of Wolbachia in aphids sampled from a geographically isolated region (Azores Islands), aiming at a better understanding and characterization of the two newly reported supergroups, M and N. The description of the supergroup M was based on 16S rRNA as well as some protein-coding genes. However, the assignment of the supergroup N was according to 16S rRNA gene sequences of a very few …

Biology.Faculdade de Ciências da VidaAnimalsSymbiosisEcology Evolution Behavior and SystematicsAzoresAphidPhylogenetic analysisEcologyPhylogenetic treeEndosymbiosisfood and beveragesAphididaebiochemical phenomena metabolism and nutritionbiology.organism_classificationHemipteraEvolutionary biologyInsect ScienceAphidsWolbachiaBuchneraSupergroupProtein-coding genes and 16S rRNA genesHorizontal transmissionWolbachia
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Nanoprobing the acidification process during intracellular uptake and trafficking

2015

Abstract Many nanoparticular drug delivery approaches rely on a detailed knowledge of the acidification process during intracellular trafficking of endocytosed nanoparticles (NPs). Therefore we produced a nanoparticular pH sensor composed of the fluorescent pH-sensitive dual wavelength dye carboxy seminaphthorhodafluor-1 (carboxy SNARF-1) coupled to the surface of amino-functionalized polystyrene NPs (SNARF-1-NP). By applying a calibration fit function to confocal laser scanning microscopy (CLSM) images, local pH values were determined. The acidification and ripening process of endo/lysosomal compartments containing nanoparticles was followed over time and was found to progress up to 6h to …

Biomedical EngineeringPharmaceutical ScienceMedicine (miscellaneous)NanoparticleBioengineeringNaphtholsPh changesHumansBenzopyransGeneral Materials ScienceDual wavelengthNanoprobingRhodaminesChemistryBiological TransportHydrogen-Ion ConcentrationFluorescenceEndocytosisNanostructuresCell biologyTransmission electron microscopyMolecular ProbesCalibrationDrug deliveryMolecular MedicineAcidsIntracellularHeLa CellsNanomedicine: Nanotechnology, Biology and Medicine
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Minireview: pH and synaptic transmission

2013

AbstractAs a general rule a rise in pH increases neuronal activity, whereas it is dampened by a fall of pH. Neuronal activity per se also challenges pH homeostasis by the increase of metabolic acid equivalents. Moreover, the negative membrane potential of neurons promotes the intracellular accumulation of protons. Synaptic key players such as glutamate receptors or voltage-gated calcium channels show strong pH dependence and effects of pH gradients on synaptic processes are well known. However, the processes and mechanisms that allow controlling the pH in synaptic structures and how these mechanisms contribute to normal synaptic function are only beginning to be resolved.

BiophysicsNeurotransmissionBiochemistryMouse modelGABAStructural BiologySynaptic augmentationGeneticsAnimalsHumansPremovement neuronal activitySynaptic transmissionMolecular BiologyNeuronal excitabilityCarbonic AnhydrasesAcid-Base EquilibriumMembrane potentialCarbonic anhydraseVoltage-dependent calcium channelChemistryGlutamate receptorCell BiologyBicarbonatesSynaptic fatigueBiochemistrypH regulationSynapsesSynaptic plasticityBiophysicsIon transporterFEBS Letters
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Afferent and efferent projections of the dorsal anterior thalamic nuclei in the lizard Podarcis hispanica (Sauria, Lacertidae).

2002

The aim of this study was to investigate the afferent and efferent connections of the anterior thalamic nuclei in the lizard Podarcis hispanica. To identify potential sources of sensory inputs and to determine the fine organization of the projections of these thalamic nuclei to the telencephalon, we injected the sensitive tracer biotinylated dextran amine (BDA) into different nuclei of the anterior dorsal thalamus. We also injected BDA into several telencephalic areas in order to corroborate the results of thalamic injections. Our results show that the anterior thalamic nuclei receive projections from multiple areas and nuclei distributed throughout most of the brain, from rhombencephalon t…

Biotinylated dextran amineAfferent PathwaysbiologyCerebrumGeneral NeuroscienceEfferentThalamusBiotinSensory systemDextransLizardsAnatomybiology.organism_classificationSomatosensory systemPodarcis hispanicaEfferent PathwaysSynaptic Transmissionmedicine.anatomical_structurenervous systemAnterior Thalamic NucleimedicineAnimalsNucleusNeuroscienceFluorescent DyesBrain research bulletin
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Susceptibility of eye fluke-infected fish to predation by bird hosts.

2005

Host manipulation by trophically transmitted parasites may predispose infected hosts to predation and in this way enhance parasite transmission. In most study systems, however, the evidence comes from laboratory studies, and therefore knowledge of the effect of manipulation on parasite transmission efficiency in the wild is still limited. Here we examined the effect ofDiplostomum spathaceum(Trematoda) eye flukes on the susceptibility of fish intermediate hosts to predation by bird definitive hosts. Our earlier studies have shown that the parasite alters fish phenotype and increases their susceptibility to artificial predation under laboratory conditions. In the present field study, we allow…

Bird DiseasesCharadriiformesAnalysis of VariancebiologyHost (biology)EcologyBird DiseasesTrematode Infectionsbiology.organism_classificationlaw.inventionPredationHost-Parasite InteractionsCharadriiformesFish DiseasesInfectious DiseasesTransmission (mechanics)lawPredatory BehaviorParasite hostingFish <Actinopterygii>AnimalsAnimal Science and ZoologyParasitologyTrematodaTrematodaParasitology
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Retrograde transport of sodium selenite and intracellular injection of micro-ruby: a combined method to describe the morphology of zinc-rich neurones.

2003

Abstract Zinc is found in synaptic vesicles in a large number of glutamatergic systems. Its involvement in neurotransmission and neurological disorders has been suggested. There are methods for tracing these circuits, but they do not fill the dendritic tree. In this study, extracellular selenite injections in vivo were combined with intracellular injection of fluorochromes in fixed tissue to reveal the morphology of these zinc-rich neurones. Intraperitoneal and intracerebral injections of sodium selenite alone or intracerebral injections of selenite combined with bisbenzimide were made in the visual cortex of the rat in order to locate the somata of zinc-rich neurones. After 24 h of retrogr…

BisbenzimideMaleSilver StainingBiotinCell CountNeurotransmissionBiologySynaptic vesicleRats Inbred WKYchemistry.chemical_compoundSodium SeleniteBiocytinNeural PathwaysExtracellularAnimalsRats WistarVisual CortexNeuronsLucifer yellowMicroscopy ConfocalRhodaminesGeneral NeuroscienceDrug Administration RoutesLysineDextransSomatosensory CortexIontophoresisIsoquinolinesRatsNeuroanatomyZincnervous systemchemistryBiochemistryAxoplasmic transportBiophysicsInjections JetExtracellular SpaceIntracellularInjections IntraperitonealJournal of neuroscience methods
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Cutoff solitons and bistability of the discrete inductance-capacitance electrical line: Theory and experiments

2007

A discrete nonlinear system driven at one end by a periodic excitation of frequency above the upper band edge (the discreteness induced cutoff) is shown to be a means to (1) generate propagating breather excitations in a long chain and (2) reveal the bistable property of a short chain. After detailed numerical verifications, the bistability prediction is demonstrated experimentally on an electrical transmission line made of 18 inductance-capacitance $(LC)$ cells. The numerical simulations of the $LC$-line model allow us also to verify the breather generation prediction with a striking accuracy.

BistabilityBreather01 natural sciencesCapacitanceLine (electrical engineering)010305 fluids & plasmasInductanceNonlinear systemElectric power transmissionQuantum electrodynamicsQuantum mechanics0103 physical sciencesCutoff010306 general physicsMathematicsPhysical Review E
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Experimental study of electrical FitzHugh-Nagumo neurons with modified excitability

2006

International audience; We present an electronical circuit modelling a FitzHugh-Nagumo neuron with a modified excitability. To characterize this basic cell, the bifurcation curves between stability with excitation threshold, bistability and oscillations are investigated. An electrical circuit is then proposed to realize a unidirectional coupling between two cells, mimicking an inter-neuron synaptic coupling. In such a master-slave configuration, we show experimentally how the coupling strength controls the dynamics of the slave neuron, leading to frequency locking, chaotic behavior and synchronization. These phenomena are then studied by phase map analysis. The architecture of a possible ne…

BistabilityComputer scienceCognitive NeuroscienceModels Neurological[MATH.MATH-DS]Mathematics [math]/Dynamical Systems [math.DS][ NLIN.NLIN-CD ] Nonlinear Sciences [physics]/Chaotic Dynamics [nlin.CD][ MATH.MATH-DS ] Mathematics [math]/Dynamical Systems [math.DS]ChaoticPhase mapAction PotentialsSynchronizationTopologyElectronic neuronsSynaptic Transmission01 natural sciencesSynchronization010305 fluids & plasmaslaw.inventionBiological ClocksArtificial IntelligencelawControl theoryOscillometry0103 physical sciencesmedicineAnimals010306 general physicsElectronic circuitNeuronsArtificial neural networkQuantitative Biology::Neurons and Cognition[SCCO.NEUR]Cognitive science/Neuroscience[SPI.TRON]Engineering Sciences [physics]/Electronics[ SPI.TRON ] Engineering Sciences [physics]/ElectronicsCoupling (electronics)medicine.anatomical_structureNonlinear DynamicsElectrical network[NLIN.NLIN-CD]Nonlinear Sciences [physics]/Chaotic Dynamics [nlin.CD][ SCCO.NEUR ] Cognitive science/NeuroscienceChaosBifurcationSynaptic couplingNeural Networks ComputerNeuron
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Structural and functional characterization of enamel pigmentation in shrews.

2013

Pigmented tooth enamel occurs in several vertebrate clades, ranging from mammals to fish. Although an iron compound is associated with this orange to red colored pigmentation, its chemical and structural organization within the enamel is unknown. To determine the nature of the iron compound, we investigated heavily pigmented teeth of the northern short-tailed shrew Blarina brevicauda using combined characterization techniques such as scanning and transmission electron microscopy and synchrotron X-ray diffraction. We found that the pigmentation of the enamel with an iron content of around 8wt% results from a close to amorphous magnetite phase deposited around the nm-sized enamel crystals. Fu…

Blarina brevicaudaMineralogychemistry.chemical_compoundstomatognathic systemMicroscopy Electron TransmissionX-Ray DiffractionStructural BiologyHardnessbiology.animalElastic ModulusmedicineAnimalsDental EnamelMagnetiteEnamel paintbiologyChemistryPigmentationPhotoelectron SpectroscopyShrewsShrewNanoindentationTooth enamelbiology.organism_classificationFerrosoferric Oxidestomatognathic diseasesmedicine.anatomical_structureTransmission electron microscopyvisual_artIron contentDentinvisual_art.visual_art_mediumBiophysicsJournal of structural biology
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