Search results for "SPEED"
showing 10 items of 876 documents
cuBool: Bit-Parallel Boolean Matrix Factorization on CUDA-Enabled Accelerators
2018
Boolean Matrix Factorization (BMF) is a commonly used technique in the field of unsupervised data analytics. The goal is to decompose a ground truth matrix C into a product of two matrices A and $B$ being either an exact or approximate rank k factorization of C. Both exact and approximate factorization are time-consuming tasks due to their combinatorial complexity. In this paper, we introduce a massively parallel implementation of BMF - namely cuBool - in order to significantly speed up factorization of huge Boolean matrices. Our approach is based on alternately adjusting rows and columns of A and B using thousands of lightweight CUDA threads. The massively parallel manipulation of entries …
Reconfigurable Accelerator for the Word-Matching Stage of BLASTN
2013
BLAST is one of the most popular sequence analysis tools used by molecular biologists. It is designed to efficiently find similar regions between two sequences that have biological significance. However, because the size of genomic databases is growing rapidly, the computation time of BLAST, when performing a complete genomic database search, is continuously increasing. Thus, there is a clear need to accelerate this process. In this paper, we present a new approach for genomic sequence database scanning utilizing reconfigurable field programmable gate array (FPGA)-based hardware. In order to derive an efficient structure for BLASTN, we propose a reconfigurable architecture to accelerate the…
Quantum Machine Learning: A tutorial
2021
This tutorial provides an overview of Quantum Machine Learning (QML), a relatively novel discipline that brings together concepts from Machine Learning (ML), Quantum Computing (QC) and Quantum Information (QI). The great development experienced by QC, partly due to the involvement of giant technological companies as well as the popularity and success of ML have been responsible of making QML one of the main streams for researchers working on fuzzy borders between Physics, Mathematics and Computer Science. A possible, although arguably coarse, classification of QML methods may be based on those approaches that make use of ML in a quantum experimentation environment and those others that take…
Alignment-Free Sequence Comparison over Hadoop for Computational Biology
2015
Sequence comparison i.e., The assessment of how similar two biological sequences are to each other, is a fundamental and routine task in Computational Biology and Bioinformatics. Classically, alignment methods are the de facto standard for such an assessment. In fact, considerable research efforts for the development of efficient algorithms, both on classic and parallel architectures, has been carried out in the past 50 years. Due to the growing amount of sequence data being produced, a new class of methods has emerged: Alignment-free methods. Research in this ares has become very intense in the past few years, stimulated by the advent of Next Generation Sequencing technologies, since those…
Combining split-and-merge and multi-seed region growing algorithms for uterine fibroid segmentation in MRgFUS treatments
2016
Uterine fibroids are benign tumors that can affect female patients during reproductive years. Magnetic resonance-guided focused ultrasound (MRgFUS) represents a noninvasive approach that uses thermal ablation principles to treat symptomatic fibroids. During traditional treatment planning, uterus, fibroids, and surrounding organs at risk must be manually marked on MR images by an operator. After treatment, an operator must segment, again manually, treated areas to evaluate the non-perfused volume (NPV) inside the fibroids. Both pre- and post-treatment procedures are time-consuming and operator-dependent. This paper presents a novel method, based on an advanced direct region detection model, …
Respiratory Muscle Strengths and Their Association with Lean Mass and Handgrip Strengths in Older Institutionalized Individuals
2020
The study of reduced respiratory muscle strengths in relation to the loss of muscular function associated with ageing is of great interest in the study of sarcopenia in older institutionalized individuals. The present study assesses the association between respiratory muscle parameters and skeletal mass content and strength, and analyzes associations with blood cell counts and biochemical parameters related to protein, lipid, glucose and ion profiles. A multicenter cross-sectional study was performed among patients institutionalized in nursing homes. The respiratory muscle function was evaluated by peak expiratory flow, maximal respiratory pressures and spirometry parameters, and skeletal m…
Signal detection for spread spectrum communication systems with gradient algorithm
2012
Retrieval process of original symbols of a spread spectrum based communication system is tried to be improved by Gradient Algorithm (GA) and Blind Source Separation (BSS) principles. Two simple schemes, based on two energy functions are presented. Time correlation properties of the channel are used as advantages in developing the filter coefficients for the receiver. Direct Sequence - Code Division Multiple Access (DS-CDMA) technique based system setup is used for algorithm testing purposes. This is identified as one of the most stable spread spectrum communication technique where most of the technologies developed for that are highly compatible with High Speed Packet Access (HSPA) transmis…
State Estimation of a Nonlinear Unmanned Aerial Vehicle Model using an Extended Kalman Filter
2008
An Extended Kalman Filter is designed in order to estimate both state variables and wind velocity vector at the same time for a non conventional unmanned aircraft. The proposed observer uses few measurements, obtained by means of either conventional simple air data sensors or a low cost GPS. To cope with the low rate of the GPS with respect to the other sensors, the EKF algorithm has been modified to allow for a dual rate measurement model. State propagation is obtained by means of an accurate six degrees of freedom nonlinear model of the aircraft dynamics. To obtain joint estimation of state and disturbance, wind velocity components are included in the set of the state variables. Both stoc…
Non-Gaussian probability density function of SDOF linear structures under wind actions
1998
Abstract Wind velocity is usually analytically described adding a static mean term to a zero mean fluctuation stationary process. The corresponding aerodynamic alongwind force acting on a single degree of freedom (SDOF) structure can be considered as a sum of three terms proportional to the mean wind velocity, to the product between mean and fluctuating part of the wind velocity and to the square power of the fluctuating wind velocity, respectively. The latter term, often neglected in the literature, is responsible for the non-Gaussian behaviour of the response. In this paper a method for the evaluation of the stationary probability density function of SDOF structures subjected to non-Gauss…
Characterization of the parameters of interior permanent magnet synchronous motors for a loss model algorithm
2017
Abstract The paper provides the results of a detailed experimental study on the variations of the characteristics of an interior permanent magnet synchronous motor, when load, speed and/or magnetization conditions vary. In particular, the characterization is carried out by assessing, for several working conditions, the motor parameters that influence its efficiency. From the knowledge of the variability of these parameters, it is possible to develop a dynamic model of the motor, which accurately describes its behaviour and allows estimating the power losses for whatever speed and load. In order to validate the model, the values of the power losses obtained by using the model are compared wi…