Search results for "Secondary"

showing 10 items of 1765 documents

Exact simulation of first exit times for one-dimensional diffusion processes

2019

International audience; The simulation of exit times for diffusion processes is a challenging task since it concerns many applications in different fields like mathematical finance, neuroscience, reliability horizontal ellipsis The usual procedure is to use discretization schemes which unfortunately introduce some error in the target distribution. Our aim is to present a new algorithm which simulates exactly the exit time for one-dimensional diffusions. This acceptance-rejection algorithm requires to simulate exactly the exit time of the Brownian motion on one side and the Brownian position at a given time, constrained not to have exit before, on the other side. Crucial tools in this study …

Girsanov theoremand phrases: Exit timeDiscretizationsecondary: 65N75Exit time Brownian motion diffusion processes Girsanov’s transformation rejection sampling exact simulation randomized algorithm conditioned Brownian motion.MSC 65C05 65N75 60G40Exit time01 natural sciencesGirsanov’s transformationrandomized algorithm010104 statistics & probabilityrejection samplingGirsanov's transformationexact simulationFOS: MathematicsApplied mathematicsMathematics - Numerical Analysis0101 mathematicsConvergent seriesBrownian motion60G40MathematicsNumerical AnalysisApplied MathematicsMathematical financeRejection samplingProbability (math.PR)diffusion processesNumerical Analysis (math.NA)conditioned Brownian motionRandomized algorithm010101 applied mathematics[MATH.MATH-PR]Mathematics [math]/Probability [math.PR]Computational MathematicsModeling and Simulationconditioned Brownian motion 2010 AMS subject classifications: primary 65C05Brownian motionRandom variableMathematics - ProbabilityAnalysis[MATH.MATH-NA]Mathematics [math]/Numerical Analysis [math.NA]
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The effects of small-scale disturbance on forest birds: a meta-analysis

2010

Small-scale disturbance is a significant process in all major forest biomes. Some silvicultural practices, particularly group selection harvesting, intend to emulate natural small-scale disturbance by harvesting small clearcuts in the continuous forest. We conducted a meta-analysis on the effects of small-scale harvesting on North American breeding forest birds. We extracted species richness and relative abundance of several functional bird groups and guilds from published studies and compared them between gap-dominated and unlogged forest as a function of forest type and the size and age of the gap. The abundance of many bird groups was higher in the gap-dominated than in the continuous f…

Global and Planetary ChangeForest typegeography.geographical_feature_categoryEcologyEcologyBiomeForestryForestryNegative associationOld-growth forestGeographySecondary forestSpecies richnessRelative species abundanceSilvicultureCanadian Journal of Forest Research
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Assessment of temperature effects on beta-aggregation of native and glycated albumin by FTIR spectroscopy and PAGE: relations between structural chan…

2007

Abstract Structural modifications of bovine serum albumin (BSA) induced by heating, and the involvement of glycation of albumin in such processing were studied by using Fourier transform infrared spectroscopy (FTIR) and polyacrylamide gel electrophoresis (PAGE). For native BSA, heating treatments gave rise to β structures which were amplified to the detriment of α-helix form, and which were associated with increased aggregation. A very high correlation was obtained between FTIR Amide I band evolution and aggregation rate parameters, showing the contribution of β-form in aggregates formation. We further assessed the effect of glycation on protein sensibility to heating treatments. A reductio…

Glycation End Products AdvancedAntioxidantTime FactorsFree Radicalsmedicine.medical_treatmentBiophysicsThermal treatmentProtein aggregationBiochemistryAntioxidantsProtein Structure SecondaryStructure-Activity RelationshipGlycationSpectroscopy Fourier Transform InfraredmedicineAnimalsGlycated Serum AlbuminBovine serum albuminFourier transform infrared spectroscopyMolecular BiologyPolyacrylamide gel electrophoresisSerum AlbuminChromatographyBinding SitesbiologyChemistryAlbuminTemperatureSerum Albumin Bovinebiology.proteinCattleElectrophoresis Polyacrylamide GelCopperArchives of biochemistry and biophysics
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Deciphering metal-induced oxidative damages on glycated albumin structure and function

2014

Background: Metal ions such as copper or zinc are involved in the development of neurodegenerative pathologies and metabolic diseases such as diabetes mellitus. Albumin structure and functions are impaired following metal-and glucose-mediated oxidative alterations. The aim of this study was to elucidate effects of Cu(II) and Zn(II) ions on glucose-induced modifications in albumin by focusing on glycation, aggregation, oxidation and functional aspects. Methods: Aggregation and conformational changes in albumin were monitored by spectroscopy, fluorescence and microscopy techniques. Biochemical assays such as carbonyl, thiol groups, albumin-bound Cu, fructosamine and amine group measurements w…

Glycation End Products AdvancedAntioxidantmedicine.medical_treatmentBiophysicsSerum albuminOxidative phosphorylationProtein aggregationBiochemistryProtein Structure Secondarychemistry.chemical_compoundMiceGlycationmedicineAnimalsGlycated Serum AlbuminMolecular BiologyCells CulturedSerum AlbuminSpectroscopychemistry.chemical_classificationGlycationbiologyMetalAlbuminAlbuminLight scatteringAlbumin; Glycation; Light scattering; Metal; Protein aggregation; SpectroscopySettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)ZincFructosamineBiochemistrychemistryThiolbiology.proteinProtein aggregationOxidation-ReductionCopper
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Glycation alters ligand binding, enzymatic, and pharmacological properties of human albumin.

2015

Albumin, the major circulating protein in blood plasma, can be subjected to an increased level of glycation in a diabetic context. Albumin exerts crucial pharmacological activities through its drug binding capacity, i.e., ketoprofen, and via its esterase-like activity, allowing the conversion of prodrugs into active drugs. In this study, the impact of the glucose-mediated glycation on the pharmacological and biochemical properties of human albumin was investigated. Aggregation product levels and the redox state were quantified to assess the impact of glycation-mediated changes on the structural properties of albumin. Glucose-mediated changes in ketoprofen binding properties and esterase-lik…

Glycation End Products AdvancedGlycosylationGlycosylationSerum albuminContext (language use)Plasma protein bindingProtein aggregationBiochemistryChromatography AffinityMass SpectrometryProtein Structure Secondarychemistry.chemical_compoundGlycationAlbuminsBlood plasmaHumansGlycated Serum AlbuminSerum AlbuminbiologyAlbuminAlbuminSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Spectrometry FluorescencechemistryBiochemistryKetoprofenbiology.proteinHumanProtein BindingBiochemistry
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Thermal aggregation of glycated bovine serum albumin

2010

International audience; Aggregation and glycation processes in proteins have a particular interest in medicine fields and in food technology. Serum albumins are model proteins which are able to self-assembly in aggregates and also sensitive to a non-enzymatic glycation in cases of diabetes. In this work, we firstly reported a study on the glycation and oxidation effects on the structure of bovine serum albumin (BSA). The experimental approach is based on the study of conformational changes of BSA at secondary and tertiary structures by FTIR absorption and fluorescence spectroscopy, respectively. Secondly, we analysed the thermal aggregation process on BSA glycated with different glucose con…

Glycation End Products AdvancedGlycosylationHot TemperatureGlycoxidation02 engineering and technologyProtein aggregationBiochemistryProtein Structure SecondaryAnalytical Chemistrychemistry.chemical_compoundProtein structureGlycationSpectroscopy Fourier Transform InfraredScattering RadiationGlycated Serum AlbuminBovine serum albuminGlycation0303 health sciencesbiologyChemistryTryptophanSerum Albumin Bovine021001 nanoscience & nanotechnology3. Good healthSpectrophotometryProtein aggregation0210 nano-technologyOxidation-ReductionGlycosylationBiophysicsSerum albuminIn Vitro Techniques03 medical and health sciencesAnimalsMolecular BiologySerum Albumin030304 developmental biologyChromatographyAlbuminAlbuminLight scatteringSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Protein tertiary structureProtein Structure TertiaryKineticsFTIR spectroscopyGlucoseSpectrometry FluorescenceUnfolded Protein Responsebiology.proteinCattleProtein Multimerization[SDV.MHEP]Life Sciences [q-bio]/Human health and pathologyBiochimica et Biophysica Acta (BBA) - Proteins and Proteomics
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The inhibition of glycerol permeation through aquaglyceroporin-3 induced by mercury(II)

2016

Mercurial compounds are known to inhibit water permeation through aquaporins (AQPs). Although in the last years some hypotheses were proposed, the exact mechanism of inhibition is still an open question and even less is known about the inhibition of the glycerol permeation through aquaglyceroporins. Molecular dynamics (MD) simulations of human aquaporin-3 (AQP3) have been performed up to 200 ns in the presence of Hg2+ ions. For the first time, we have observed the unbiased passage of a glycerol molecule from the extracellular to cytosolic side. Moreover, the presence of Hg2+ ions covalently bound to Cys40 leads to a collapse of the aromatic/arginine selectivity filter (ar/R SF), blocking th…

Glycerol0301 basic medicineMolecular dynamicCell Membrane PermeabilityBiochemistryProtein Structure Secondarychemistry.chemical_compoundGLPFCOORDINATIONCRYSTALEscherichia coli ProteinsPermeationBiochemistryCovalent bondSettore CHIM/03 - Chimica Generale E InorganicaPhosphatidylcholinesCOMPLEXESProtein BindingSTRUCTURAL BASISCations DivalentPlasmodium falciparumAquaporinCYSTEINE-189Molecular Dynamics SimulationMolecular dynamicsAquaporinsWATER CHANNELInorganic Chemistry03 medical and health sciencesEscherichia coliGlycerolExtracellularHumansMoleculePERMEABILITYProtein Structure QuaternaryAquaporin 3Binding SitesAQUAPORIN INHIBITIONWaterBiological TransportMembranes ArtificialAquaglyceroporinMercurySIMULATIONSProtein Structure TertiaryCytosolWater permeation030104 developmental biologyAquaglyceroporinschemistryStructural Homology ProteinBiophysicsGlycerol permeationJournal of Inorganic Biochemistry
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Physiology and genetics of antibiotic production and resistance.

1993

Actinomycetes have the genetic capability to synthesize many different biologically active secondary metabolites and of these compounds, antibiotics predominate in therapeutic and commercial importance. Intensive research often centres on the use of molecular techniques to investigate the physiology and genetics of antibiotic biosynthesis with a view to improving production. The isolation of clones of Streptomyces hygroscopicus, the producer of geldanamycin, which synthesizes geldanamycin in S. lividans, is reported. Molecular approaches using genes for elongation factors (tuf) were used in attempts to increase the fermentation yield of kirromycin, whilst probes for aphD and sph, genes for …

Glycerolmedicine.drug_classPyridonesLactams MacrocyclicAntibioticsPhysiologyBiologySecondary metaboliteIn Vitro TechniquesMicrobiologychemistry.chemical_compoundActinomycetalesSpiramycinmedicineMolecular BiologyGeneGeneticsProdigiosinSpiramycinDrug Resistance MicrobialGeneral MedicineGeldanamycinbiology.organism_classificationStreptomycesAnti-Bacterial AgentschemistryBiochemistryStreptomycinTobramycinStreptomyces hygroscopicusBacteriamedicine.drugResearch in microbiology
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Membrane-insertion fragments of Bcl-xL, Bax, and Bid.

2004

Apoptosis regulators of the Bcl-2 family associate with intracellular membranes from mitochondria and the endoplasmic reticulum, where they perform their function. The activity of these proteins is related to the release of apoptogenic factors, sequestered in the mitochondria, to the cytoplasm, probably through the formation of ion and/or protein transport channels. Most of these proteins contain a C-terminal putative transmembrane (TM) fragment and a pair of hydrophobic alpha helices (alpha5-alpha6) similar to the membrane insertion fragments of the ion-channel domain of diphtheria toxin and colicins. Here, we report on the membrane-insertion properties of different segments from antiapopt…

GlycosylationStereochemistryRecombinant Fusion ProteinsMolecular Sequence Databcl-X ProteinBcl-xLApoptosisBiochemistryProtein Structure SecondaryMembrane LipidsMiceProtein structureBcl-2-associated X proteinPredictive Value of TestsProto-Oncogene ProteinsProtein Interaction MappingAnimalsHumansAmino Acid SequencePeptide sequencebcl-2-Associated X ProteinbiologyIntracellular MembranesTransmembrane proteinPeptide FragmentsTransport proteinProtein TransportProto-Oncogene Proteins c-bcl-2Multigene FamilyHelixbiology.proteinBiophysicsCarrier ProteinsHydrophobic and Hydrophilic InteractionsAlpha helixBH3 Interacting Domain Death Agonist ProteinBiochemistry
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Deepen Into the Social Segregation of Secondary Schools in the Community of Madrid

2021

Recientes estudios han mostrado que la segregación escolar por nivel socioeconómico en la Comunidad de Madrid es muy alta, la más alta de España, y una de las más elevadas de Europa. Esta investigación profundiza en el conocimiento de la segregación escolar por nivel socioeconómico en educación secundaria con datos recientes mediante la consecución de tres objetivos: a) estimando su magnitud con diversas estrategias, calculando su perfil para 19 grupos minoritarios y comparándola con otras Comunidades; b) estudiando el papel de los centros públicos, privados concertados y no concertados; y c) determinando la aportación del programa de bilingüismo a la segregación. Se realiza una explotación…

GovernmentEducación secundariaIndex (economics)Secondary educationMadridEducacióneducationGeneral Engineering:SOCIOLOGÍA [UNESCO]Educational inequalityIndex of dissimilarityGeographySegregación escolarEquidad educativaUNESCO::SOCIOLOGÍANivel socioeconómicoSocioeconomicsSocioeconomic statusInclusion (education)Neuroscience of multilingualism
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