Search results for "Soft"
showing 10 items of 9809 documents
The relationships between soft-sediment deformation structures and synsedimentary extensional tectonics in Upper Triassic deep-water carbonate succes…
2016
Abstract We describe soft-sediment deformation structures into the Upper Triassic cherty limestone outcropping in the Pizzo Lupo section (Central Sicily, Italy), pertaining to the deep-water palaeodomain of the Southern Tethyan margin. In the study section, mainly consisting of thin-bedded mudstone/marl alternations with bedded chert intercalations, some lithofacies have been separated on the basis of the abundance of the calcium carbonate/clay content and the overall textural features. The deformational structures, displaying different deformational styles as folded and faulted beds, disturbed layers, clastic dikes, and slumps occur mainly in the deformed horizons that involve marl-dominat…
Rereading a tree-ring database to illustrate depositional histories of subfossil trees
2017
Late Quaternary tree-ring chronologies have been constructed using data collected from subfossil trees preserved under favourable conditions in lake sediments and peat deposits. Tree-ring widths and densities are commonly used for reconstructions of past climate variability. An alternative way of using these data is to explore the replication curves of these chronologies. Here, we make use of previously collected data that is currently available from tree-ring databases to demonstrate the depositional histories of pine trees once accumulated into the sediment in lake (i.e., riparian trees) and peatland sites. Divergent courses of depositional histories were obtained for different sedimentar…
Stage boundaries, global stratigraphy, and the time scale: towards a simplification
2004
International audience; This paper examines four facets of stratigraphic terminology and usage considered faulty and proposes corrective measures. The four perfectible areas are: (1) The system of dual nomenclature requiring discrete terminologies for the superpositional and temporal aspects of rock units. (2) The premise that a GSSP establishes the base of a stage as being coincident with the top of the preceding stage rather than simply defining it as the boundary between stages. (3) The rejection of supplementary (auxiliary) sections that would broaden the knowledge of a GSSP and enlarge the area in which it is easily usable. (4) The current dual system of nomenclature for Precambrian an…
Seismites resulting from high-frequency, high-magnitude earthquakes in Latvia caused by Late Glacial glacio-isostatic uplift
2016
Abstract Geologically extremely rapid changes in altitude by glacial rebound of the Earth crust after retreat of the Scandinavian Ice Sheet at the end of the last Weichselian glaciation influenced the palaeogeography of northern Europe. The uplift of the Earth crust apparently was not gradual, but shock-wise, as the uplift was accompanied by frequent, high-magnitude earthquakes. This can be deduced from strongly deformed layers which are interpreted as seismites. Such seismites have been described from several countries around the Baltic Sea, including Sweden, Germany and Poland. Now similarly deformed layers that must also be interpreted as seismites, have been discovered also in Latvia, a…
Speleothems from the Middle East: An Example of Water Limited Environments in the SISAL Database
2019
The Middle East (ME) spans the transition between a temperate Mediterranean climate in the Levant to hyper-arid sub-tropical deserts in the southern part of the Arabian Peninsula (AP), with the complex alpine topography in the northeast feeding the Euphrates and Tigris rivers which support life in the Southeastern Fertile Crescent (FC). Climate projections predict severe drying in several parts of the ME in response to global warming, making it important to understand the controls of hydro-climate perturbations in the region. Here we discuss 23 ME speleothem stable oxygen isotope (δ18Occ) records from 16 sites from the SISAL_v1 database (Speleothem Isotope Synthesis and Analysis database), …
Planning for the future : identifying conservation priority areas for Iberian birds under climate change
2018
[Context]: Species are expected to shift their distributions in response to global environmental changes and additional protected areas are needed to encompass the corresponding changes in the distributions of their habitats. Conservation policies are likely to become obsolete unless they integrate the potential impacts of climate and land-use change on biodiversity.
Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.
2018
International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …
Coping with the climate: cuticular hydrocarbon acclimation of ants under constant and fluctuating conditions
2018
International audience; Terrestrial arthropods achieve waterproofing by a layer of cuticular hydrocarbons (CHCs). At the same time, CHCs also serve as communication signals. To maintain waterproofing under different climate conditions, insects adjust the chemical composition of their CHC layer, but this may affect the communication via CHCs. The detailed acclimatory changes of CHCs and how these influence their physical properties are still unknown. Here, we studied acclimation in two closely related ant species with distinct CHC profiles, Myrmica rubra and Myrmica ruginodis, in response to constant or fluctuating temperature and humidity regimes. We measured how acclimation affected CHC co…
X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification
2017
X!TandemPipeline is a software designed to perform protein inference and to manage redundancy in the results of phosphosite identification by database search. It provides the minimal list of proteins or phosphosites that are present in a set of samples using grouping algorithms based on the principle of parsimony. Regarding proteins, a two-level classification is performed, where groups gather proteins sharing at least one peptide and subgroups gather proteins that are not distinguishable according to the identified peptides. Regarding phosphosites, an innovative approach based on the concept of phosphoisland is used to gather overlapping phosphopeptides. The graphical interface of X!Tandem…
Low but contrasting neutral genetic differentiation shaped by winter temperature in European great tits.
2016
Gene flow is usually thought to reduce genetic divergence and impede local adaptation by homogenising gene pools between populations. However, evidence for local adaptation and phenotypic differentiation in highly mobile species, experiencing high levels of gene flow, is emerging. Assessing population genetic structure at different spatial scales is thus a crucial step towards understanding mechanisms underlying intraspecific differentiation and diversification. Here, we studied the population genetic structure of a highly mobile species - the great tit Parus major - at different spatial scales. We analysed 884 individuals from 30 sites across Europe including 10 close-by sites (< 50 km), u…