Search results for "Spectrometry"

showing 10 items of 3206 documents

Chemical and mineralogical analyses on stones from Sagunto Castle (Spain)

2019

Abstract For the first time, an archaeometric study was carried out on the carbonate rock ashlars of the Sagunto Castle. The studied site is one of the most important and best preserved Spanish archaeological and architectural monuments, characterized by different construction phases from the Roman period to Modern Ages. Forty samples collected from thirteen different structures of Sagunto Castle and two quarries, located in the Sagunto's hill were used for comparative purposes. The samples were analyzed by X-ray diffraction, X-ray fluorescence and inductively coupled plasma mass spectrometry to determine their mineralogical and elemental composition. The obtained data show similar chemical…

010506 paleontologyArcheologyElemental composition060102 archaeologyOutcropRemainsBuilding stone06 humanities and the artsMineralogyMiddle ages01 natural sciencesArchaeologyRoman periodBuilding stone; Chemistry; Fortress; Middle ages; Mineralogy; Remains; Roman periodFortressChemistryPeriod (geology)Carbonate rock0601 history and archaeologyarchaeometrics; carbonate rock ashlars; X-ray fluorescence and inductively coupled plasma mass spectrometry0105 earth and related environmental sciencesJournal of Archaeological Science: Reports
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2017

We present a new multi-analytical approach to the characterization of black pigments in Spanish Levantine rock art. This new protocol seeks to identify the raw materials that were used, as well as reconstruct the different technical gestures and decision-making processes involved in the obtaining of these black pigments. For the first of these goals, the pictorial matter of the black figurative motifs documented at the Les Dogues rock art shelter (Ares del Maestre, Castellon, Spain) was characterized through the combination of physicochemical and archeobotanical analyses. During the first stage of our research protocol, in situ and non-destructive analyses were carried out by means of porta…

010506 paleontologyMultidisciplinary010401 analytical chemistryChaîne opératoireFluorescence spectrometryColoring agents01 natural sciencesArchaeology0104 chemical sciencesPrehistoryPlant mattervisual_artvisual_art.visual_art_mediumIdentification (biology)Rock artCharcoalGeology0105 earth and related environmental sciencesPLOS ONE
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Floral scent in a sexually deceptive Ophrys orchid: from headspace collections to solvent extractions

2018

Sexually deceptive orchid flowers use visual, tactile and olfactory cues of female insects in order to attract males of one or a few closely related species as pollinators. Ophrys L. is the most species-rich genus of sexually deceptive orchids in the Mediterranean Basin. Despite Ophrys pollinated by Andrena male bees use alkanes and mainly alkenes with specific double-bond positions as key signals that trigger pseudocopulatory behavior, some volatile organic compounds (VOCs) with low molecular weight were found as long-range attractants non-eliciting copulatory behavior. Since floral scents in Ophrys have been extensively studied by solvent extractions here we aimed to understand which flor…

0106 biological sciences0301 basic medicineAndrenapollinationPollinationAndrenaPlant ScienceFlowers01 natural sciencesGas Chromatography-Mass Spectrometry03 medical and health sciencesPollinatorvolatile organic compoundsBotanyOphrys panormitanaOrchidaceaeOphrysOrchidaceaebiologySettore CHIM/06 - Chimica Organicabiology.organism_classificationPseudocopulation030104 developmental biologyOdorantsSettore BIO/03 - Botanica Ambientale E ApplicataKovats retention indexGas chromatography010606 plant biology & botanyResearch Paper
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Mycorrhizal symbiosis primes the accumulation of antiherbivore compounds and enhances herbivore mortality in tomato

2021

Abstract Plant association with arbuscular mycorrhizal fungi (AMF) can increase their ability to overcome multiple stresses, but their impact on plant interactions with herbivorous insects is controversial. Here we show higher mortality of the leaf-chewer Spodoptera exigua when fed on tomato plants colonized by the AMF Funneliformis mosseae, evidencing mycorrhiza-induced resistance. In search of the underlying mechanisms, an untargeted metabolomic analysis through ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS) was performed. The results showed that mycorrhizal symbiosis had a very limited impact on the leaf metabolome in the absence of stress, but significantly m…

0106 biological sciences0301 basic medicineAzelaic acidPhysiologyPlant Science01 natural sciences03 medical and health sciencesMetabolomicsSolanum lycopersicumSymbiosisTandem Mass SpectrometrySpodoptera exiguaMycorrhizaeBotanyExiguamedicineMetabolomeAnimalsMetabolomicsmycorrhiza induced resistanceHerbivoryArbuscular mycorrhizaSymbiosisHerbivorebiologyAcademicSubjects/SCI01210AlkaloidfungiFungifood and beveragesbiology.organism_classificationResearch PapersArbuscular mycorrhizaspodoptera exigua030104 developmental biologyDefence primingPlant—Environment InteractionsMycorrhiza induced resistance Spodoptera exiguaChromatography Liquid010606 plant biology & botanymedicine.drug
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The problem of misidentification between edible and poisonous wild plants: Reports from the Mediterranean area

2018

Abstract Today, in many European countries, people are looking for wild edible plants to experience new tastes and flavors, by following the new trend of being green and environmentally friendly. Young borage and spinach leaves can be easily confused by inexpert pickers with those of other plants, including poisonous ones, such as Mandragora autumnalis Bertol. (mandrake) or Digitalis purpurea L. (foxglove), common in southern and northern Italy respectively. In the last twenty years, several cases of intoxication by accidental ingestion of mandrake and foxglove have been reported. The purpose of this work was to perform a pharmacognostic characterization of young leaves from borage, mandrak…

0106 biological sciences0301 basic medicineChromatography GasDigitalis GlycosidePhytochemicalsIntoxicationBiologyPhytochemicalToxicology010603 evolutionary biology01 natural sciencesEdible plantGas Chromatography-Mass SpectrometryAccidental ingestion03 medical and health sciencesPlant leaveAlkaloidsAlkaloidHumansDiscriminant analysePoisonous plants Edible plants Plant leaves Accidental ingestion Intoxication Discriminant analysesBorageTraditional medicineMediterranean RegionSettore BIO/02 - Botanica SistematicaDigitalis purpureafood and beveragesMandragora autumnalisDigitalis GlycosidesDiscriminant analysesGeneral MedicineMandrakebiology.organism_classificationPoisonous plantPlant LeavesPlants Toxic030104 developmental biologyPhytochemicalItalyChromatography GaPoisonous plantsSettore BIO/03 - Botanica Ambientale E ApplicataAccidental ingestionEdible plantsEdible plantsMediterranean areaPlants EdibleFood ScienceHuman
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Fatty acids produced by Neofusicoccum vitifusiforme and N. Parvum, fungi associated with grapevine botryosphaeria dieback

2018

There is evidence that secondary metabolites are involved in the fungal pathogenicity and virulence of Neofusicoccum spp. Fatty acids may also influence the plant&ndash

0106 biological sciences0301 basic medicineLinoleic acidAzelaic acidLinoleic acidVirulencePlant ScienceBiology01 natural sciences03 medical and health scienceschemistry.chemical_compoundBotanymedicinegrapevine trunk diseaseslcsh:Agriculture (General)Botryosphaeriachemistry.chemical_classificationGrapevine trunk diseaseGC/MSFatty acidfood and beveragesAzelaic acidBotryosphaeriaceaebiology.organism_classificationlcsh:S1-972Neofusicoccum030104 developmental biologychemistryBotryosphaeriaceaeGas chromatography–mass spectrometryAgronomy and Crop Science010606 plant biology & botanymedicine.drugFood ScienceSettore AGR/16 - Microbiologia Agraria
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The Odorant-Binding Proteins of the Spider Mite Tetranychus urticae

2021

Spider mites are one of the major agricultural pests, feeding on a large variety of plants. As a contribution to understanding chemical communication in these arthropods, we have characterized a recently discovered class of odorant-binding proteins (OBPs) in Tetranychus urticae. As in other species of Chelicerata, the four OBPs of T. urticae contain six conserved cysteines paired in a pattern (C1–C6, C2–C3, C4–C5) differing from that of insect counterparts (C1–C3, C2–C5, C4–C6). Proteomic analysis uncovered a second family of OBPs, including twelve members that are likely to be unique to T. urticae. A three-dimensional model of TurtOBP1, built on the recent X-ray structure of Varroa destruc…

0106 biological sciences0301 basic medicineModels MolecularProteomicsProteomeOdorant bindingProtein ConformationInsectLigandsReceptors Odorant01 natural scienceschemistry.chemical_compoundTetranychus urticaeBiology (General)SpectroscopyPhylogenymedia_commonmass spectrometryGeneticsbiologyligand-bindingMolecular Structurespider mitesGeneral MedicineTetranychus urticaeComputer Science ApplicationsChemistryConiferyl aldehydedisulfide bridgesTetranychidaeProtein Bindingspider mites.QH301-705.5media_common.quotation_subjectodorant-binding proteinsCatalysisArticleInorganic Chemistry03 medical and health sciencesSpider mite<i>Tetranychus urticae</i>AnimalsAmino Acid SequencePhysical and Theoretical ChemistryQD1-999Molecular BiologySpiderOrganic Chemistrybiology.organism_classification010602 entomology030104 developmental biologychemistryVarroa destructorOdorantsChelicerataInternational Journal of Molecular Sciences
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X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification

2017

X!TandemPipeline is a software designed to perform protein inference and to manage redundancy in the results of phosphosite identification by database search. It provides the minimal list of proteins or phosphosites that are present in a set of samples using grouping algorithms based on the principle of parsimony. Regarding proteins, a two-level classification is performed, where groups gather proteins sharing at least one peptide and subgroups gather proteins that are not distinguishable according to the identified peptides. Regarding phosphosites, an innovative approach based on the concept of phosphoisland is used to gather overlapping phosphopeptides. The graphical interface of X!Tandem…

0106 biological sciences0301 basic medicinePhosphopeptidesProteomicsphosphopeptideComputer sciencecomputer.internet_protocolcomputer.software_genre01 natural sciencesBiochemistrydatabase search03 medical and health sciencesSearch engineUser-Computer InterfaceRedundancy (information theory)SoftwareTandem Mass Spectrometry[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM]HumansDatabase search engineAmino Acid SequenceDatabases ProteinGraphical user interfacemass spectrometrybusiness.industrysoftwareprotein inferenceProteinsGeneral ChemistrybioinformaticsSearch EngineBenchmarking030104 developmental biologyComputingMethodologies_PATTERNRECOGNITIONProtein inferenceData mining[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businesscomputerXMLAlgorithms010606 plant biology & botany
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Proposal of a Citrus translational genomic approach for early and infield detection of Flavescence dorée in Vitis

2014

Flavescence dore´e (FD) is one of the most widely known grapevine yellows disease and one of the most unabated worldwide in the viticulture sector. In this paper, we outline a strategy for developing an integrated system of technologies to enable rapid, early disease FD detection and diagnosis. We propose the deployment of a newly developed sensor device, the differential mobility spectrometer (DMS), which has shown positive results with a similar vector-borne disease in Citrus. We have previously demonstrated that the gas chromatograph DMS (GC/DMS) can distinguish various citrus diseases, and the system may also allow detection of volatile organic compound (VOC) signals from a tree of othe…

0106 biological sciences0301 basic medicinePlant ScienceComputational biologyBiology01 natural sciences03 medical and health sciencesSettore AGR/07 - Genetica AgrariaBotanyProfile analysisPlant systemEcology Evolution Behavior and SystematicsDifferential mobility spectrometer early detection Flavescence dore´e phytoplasma qRT-PCR ELISA VitisfungiEarly diseasefood and beveragesSettore AGR/12 - Patologia VegetaleGrapevine yellowsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologySettore AGR/14 - PedologiaFlavescence doréeGas chromatographyGas chromatography–mass spectrometryDisease transmission010606 plant biology & botany
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An integrated proteomic and metabolomic study to evaluate the effect of nucleus-cytoplasm interaction in a diploid citrus cybrid between sweet orange…

2018

Key message: Our results provide a comprehensive overview how the alloplasmic condition might lead to a significant improvement in citrus plant breeding, developing varieties more adaptable to a wide range of conditions. Abstract: Citrus cybrids resulting from somatic hybridization hold great potential in plant improvement. They represent effective products resulting from the transfer of organelle-encoded traits into cultivated varieties. In these cases, the plant coordinated array of physiological, biochemical, and molecular functions remains the result of integration among different signals, which derive from the compartmentalized genomes of nucleus, plastids and mitochondria. To dissect …

0106 biological sciences0301 basic medicineProteomicsCitrusCytoplasmCitruProtoplast fusionCybridPlant ScienceProteomicsDisaccharides01 natural sciencesGenomeMass SpectrometryDisaccharideCitrus spp.Electrophoresis Gel Two-DimensionalCell NucleuChromatography High Pressure LiquidCitrus sinensiPlant ProteinsGeneticsChromatography Reverse-Phasefood and beveragesPlant ProteinGeneral MedicineVolatile organic compoundGlucuronateProteomePloidyPlant LeaveCitrus sinensisBreeding programMetabolomicGlucuronatesStomatal conductanceBiology03 medical and health sciencesMetabolomicsGeneticGeneticsMetabolomicsPlant breedingPlastidCitrus sppCell NucleusVolatile Organic CompoundsfungiProteomicDiploidyPlant LeavesPlant Breeding030104 developmental biologyAgronomy and Crop Science010606 plant biology & botanyPlant molecular biology
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