Search results for "Spectrophotometry"

showing 10 items of 644 documents

Determination of total phenolic compounds in compost by infrared spectroscopy

2016

Abstract Middle and near infrared (MIR and NIR) were applied to determine the total phenolic compounds (TPC) content in compost samples based on models built by using partial least squares (PLS) regression. The multiplicative scatter correction, standard normal variate and first derivative were employed as spectra pretreatment, and the number of latent variable were optimized by leave-one-out cross-validation. The performance of PLS-ATR-MIR and PLS-DR-NIR models was evaluated according to root mean square error of cross validation and prediction (RMSECV and RMSEP), the coefficient of determination for prediction ( R pred 2 ) and residual predictive deviation (RPD) being obtained for this la…

Spectroscopy Near-InfraredCoefficient of determinationSpectrophotometry InfraredMean squared errorChemistryCompost010401 analytical chemistryNear-infrared spectroscopyAnalytical chemistryInfrared spectroscopy04 agricultural and veterinary sciencesengineering.materialResidual040401 food science01 natural sciencesCross-validation0104 chemical sciencesAnalytical ChemistrySoil0404 agricultural biotechnologyPhenolsPartial least squares regressionengineeringLeast-Squares AnalysisTalanta
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Effect of T-R conformational change on sickle-cell hemoglobin interactions and aggregation

2004

We compare the role of a conformational switch and that of a point mutation in the thermodynamic stability of a protein solution and in the consequent propensity toward aggregation. We study sickle-cell hemoglobin (HbS), the beta6 Glu-Val point mutant of adult human hemoglobin (HbA), in its R (CO-liganded) conformation, and compare its aggregation properties to those of both HbS and HbA in their T (unliganded) conformation. Static and dynamic light scattering measurements performed for various hemoglobin concentrations showed critical divergences with mean field exponents as temperature was increased. This allowed determining spinodal data points T(S)(c) by extrapolation. These points were …

SpinodalConformational changeLightProtein ConformationEntropyHemoglobin SickleEnthalpyMolecular ConformationNucleationThermodynamicsProtein aggregationBiochemistryHydrophobic effectDynamic light scatteringStructural BiologySpectroscopy Fourier Transform InfraredHumansPoint MutationScattering RadiationMolecular BiologyCell AggregationCarbon MonoxideChemistryTemperatureProteinsHydrogen-Ion ConcentrationCrystallographyModels ChemicalSpectrophotometryThermodynamicsProtein BindingEntropy (order and disorder)Proteins: Structure, Function, and Bioinformatics
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Polyester vascular prostheses coated with a cyclodextrin polymer and activated with antibiotics: Cytotoxicity and microbiological evaluation

2008

Abstract Polyester (PET) vascular grafts are used to replace or bypass damaged arteries. To minimize the risk of infection during and after surgical interventions, a PET vascular prosthesis (Polythese®) was functionalized with cyclodextrin polymers (PolyCDs) in order to obtain the controlled release of antibiotics (ABs: ciprofloxacin, vancomcyin and rifampicin). An epithelial cell line (L132) was used to determine the viability of the antibiotics, and human pulmonary microvascular endothelial cells (HPMEC) were used for cell proliferation by cell counting and cell vitality with Alamar Blue fluorescent dye. Staphylococcus aureus, Escherichia coli and Enteroccocus sp. were used to determine t…

Staphylococcus aureusMaterials scienceCell Survivalmedicine.drug_classPolyestersAntibioticsBiomedical EngineeringMicrobial Sensitivity TestsProsthesis DesignBiochemistryMicrobiologyBiomaterialsMinimum inhibitory concentrationCiprofloxacinVancomycinIn vivoEscherichia colimedicineHumansCelluloseCytotoxicityMolecular BiologyCyclodextrinsGeneral MedicineAntimicrobialAnti-Bacterial AgentsBlood Vessel ProsthesisCiprofloxacinSpectrophotometryToxicityVancomycinRifampinEnterococcusBiotechnologymedicine.drugActa Biomaterialia
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Membrane D-lactate oxidase in Zymomonas mobilis: evidence for a branched respiratory chain.

1998

Respiratory chain composition of the ethanol-producing bacterium Zymomonas mobilis was studied. Its membrane D-lactate oxidase was characterised. With NADH, but not D-lactate as substrate, a cytochrome o-like component was seen in CO difference spectra. Chlorpromazine specifically inhibited reduction of cytochrome d, while myxothiazol eliminated the cytochrome o-like features in CO difference spectra. It is suggested that electrons from NADH are distributed between branches terminated by the cytochrome o-like component, cytochrome a, and cytochrome d. With D-lactate, electrons are transported to cytochrome a, or an unidentified CN(-)-sensitive oxidase, and cytochrome d.

StereochemistryChlorpromazineMicrobiologyMixed Function OxygenasesElectron Transportchemistry.chemical_compoundOxygen ConsumptionCytochrome C1Multienzyme ComplexesGeneticsCytochrome c oxidaseNADH NADPH OxidoreductasesLactic AcidMolecular BiologyZymomonasbiologyMyxothiazolCytochrome b6f complexCytochrome bCytochrome cCytochrome dNADAerobiosisThiazolesBiochemistrychemistrySpectrophotometryCoenzyme Q – cytochrome c reductasebiology.proteinCytochromesMethacrylatesOxidation-ReductionFEMS microbiology letters
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Binding Mode and Selectivity of a Scorpiand-Like Polyamine Ligand to Single- and Double-Stranded DNA and RNA: Metal- and pH-Driven Modulation

2017

The interaction of a polyazacyclophane ligand having an ethylamine pendant arm functionalized with an anthryl group (L), with the single-stranded polynucleotides polyA, polyG, polyU, and polyC as well as with the double-stranded polynucleotides polyA-polyU, poly(dAT)(2), and poly(dGC)(2) has been followed by UV/Vis titration, steady state fluorescence spectroscopy, and thermal denaturation measurements. In the case of the single-stranded polynucleotides, the UV/Vis and fluorescence titrations permit to distinguish between sequences containing purine and pyrimidine bases. For the double-stranded polynucleotides the UV/Vis measurements show for all of them hypochromicity and bathochromic shif…

StereochemistryIntercalation (chemistry)DNA Single-Stranded010402 general chemistryLigands01 natural sciencesCatalysissupramolecular chemistryNucleobaseMolecular recognitionCoordination Complexesfluorescent probesBathochromic shiftPolyaminesFluorescent DyesQuenching (fluorescence)010405 organic chemistryChemistryLigandOrganic ChemistryGeneral ChemistryDNAHydrogen-Ion ConcentrationnucleobasesFluorescenceIntercalating Agents0104 chemical sciencesSpectrometry FluorescencePolynucleotideRNASpectrophotometry Ultravioletmolecular recognition
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Eukaryotic tRNAs(Pro): primary structure of the anticodon loop; presence of 5-carbamoylmethyluridine or inosine as the first nucleoside of the antico…

1990

The modified nucleoside U*, located in the first position of the anticodon of yeast, chicken liver and bovine liver tRNA(Pro) (anticodon U*GG), has been determined by means of TLC, HPLC, ultraviolet spectrum and gas chromatography-mass spectrometry. The structure was established as 5-carbamoylmethyluridine (ncm5U). In addition, we report on the primary structures of the above-mentioned tRNAs as well as those which have the IGG anticodon. In yeast, the two tRNA(Pro) (anticodons U*GG and IGG) differ by eight nucleotides, whereas in chicken and in bovine liver, both anticodons are carried by the same 'body tRNA' with one posttranscriptional exception at position 32, where pseudouridine is asso…

StereochemistryMolecular Sequence DataBiophysicsBiologyBiochemistryPseudouridinechemistry.chemical_compoundRNA Transfer ProRNA TransferStructural BiologyYeastsGeneticsmedicineAnticodonAnimalsNucleotideInosineUridinechemistry.chemical_classificationChromatographyBase SequenceMolecular StructureProtein primary structureFungal geneticsRNARNA FungalRNA Transfer Amino Acid-SpecificInosinechemistryBiochemistryTransfer RNANucleic Acid ConformationCattleSpectrophotometry UltravioletNucleosideChickensmedicine.drugBiochimica et biophysica acta
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Synthesis, structure, and nuclease properties of several binary and ternary complexes of copper(II) with norfloxacin and 1,10 phenantroline

2007

Three new binary Cu(II) complexes of norfloxacin have been synthesized and characterized. We also report the synthesis, characterization and X-ray crystallographic structures of a new binary compound, [Cu(HNor)(2)]Cl(2).2H(2)O (2) and two new ternary complexes norfloxacin-copper(II)-phen, [Cu(Nor)(phen)(H(2)O)](NO(3)).3H(2)O (4), and [Cu(HNor)(phen)(NO(3))](NO(3)).3H(2)O (5). The structure of 2 consists of two crystallographically independent cationic monomeric units of [Cu(HNor)(2)](2+), chloride anions, and uncoordinated water molecules. The Cu(II) ion is placed at a center of symmetry and is coordinated to two norfloxacin ligands which are related through the inversion center. The struct…

StereochemistryRadicalBinary compoundCrystallography X-RayBiochemistryInorganic ChemistryMetalchemistry.chemical_compoundTandem Mass SpectrometrySpectroscopy Fourier Transform InfraredOrganometallic CompoundsMoleculeDeoxyribonucleasesMolecular StructureCationic polymerizationSquare pyramidal molecular geometryCrystallographyMonomerchemistryvisual_artvisual_art.visual_art_mediumSpectrophotometry UltravioletTernary operationCopperFluoroquinolonesNorfloxacinPhenanthrolinesJournal of Inorganic Biochemistry
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Fluoroquinolone–metal complexes: A route to counteract bacterial resistance?

2014

Abstract Microbial resistance to antibiotics is one of the biggest public health threats of the modern world. Antibiotic resistance is an area of much clinical relevance and therefore research that has the potential to identify agents that may circumvent it or treat resistant infections is paramount. Solution behavior of various fluoroquinolone (FQ) complexes with copper(II) in the presence and absence of 1,10-phenanthroline (phen) was studied in aqueous solution, by potentiometry and/or spectrophotometry, and are herein described. The results obtained showed that under physiological conditions (micromolar concentration range and pH 7.4) only copper(II):FQ:phen ternary complexes are stable.…

Stereochemistrychemistry.chemical_elementInfrared spectroscopyMicrobial Sensitivity TestsCrystallography X-RayBiochemistryInorganic ChemistryMetalMinimum inhibitory concentrationCoordination ComplexesSpectrophotometryDrug Resistance BacterialEscherichia colimedicineMoleculeAqueous solutionmedicine.diagnostic_testChemistryCombinatorial chemistryCoppervisual_artvisual_art.visual_art_mediumTernary operationCopperFluoroquinolonesPhenanthrolinesJournal of Inorganic Biochemistry
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Spectroscopic and conformational properties of size-fractions separated from a lignite humic acid

2007

Abstract A lignite humic acid (HA) was fractionated by preparative high performance size-exclusion chromatography (HPSEC) in seven different size-fractions. The size-fractions were characterized by cross polarization (CP) magic angle spinning (MAS) 13 C NMR spectroscopy and a further analytical HPSEC elution under UV and fluorescence detection. The alkyl hydrophobic components mainly distributed in the largest molecular-size-fraction, whereas the amount of oxidized carbons increased with decreasing size of fractions. Cross polarization time ( T CH ) and proton spin-lattice relaxation time in the rotating frame ( T 1 ρ (H)) were measured from variable contact time (VCT) experiments. The bulk…

Steric effectsMagnetic Resonance SpectroscopyEnvironmental EngineeringHealth Toxicology and MutagenesisSettore AGR/13 - Chimica AgrariaAnalytical chemistryFractionationLigninFluorescence spectroscopyMagic angle spinningEnvironmental ChemistryHumic acidParticle SizeHumic SubstancesAlkylchemistry.chemical_classificationChemistrySpectrum AnalysisPublic Health Environmental and Occupational HealthGeneral MedicineGeneral ChemistryCarbon-13 NMRPollutionNMR spectra databaseHumic substancesSize-fractionationHPSECCPMAS-13C NMRUV and fluorescence spectrophotometryEnvironmental PollutantsEnvironmental MonitoringChemosphere
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Study of Confined 5-Aza[5]helicene in Ytterbium(III) Bis(2-ethylhexyl) Sulfosuccinate Reversed Micelles

2007

Some relevant physicochemical properties of 5-aza[5]helicene (H5) in solutions of ytterbium bis(2-ethylhexyl) sulfosuccinate (Yb(DEHSS)3) reversed micelles have been investigated by UV-vis-NIR, photoluminescence, and FT-IR techniques with the aim of emphasizing the role played by specific Yb(III)/H5 interactions and confinement effects as driving forces of its binding to reversed micelles, preferential solubilization site, and local photophysical properties. It has been found that the binding strength of 5-aza[5]helicene to reversed micelles, triggered by steric and orientational constrains as well as the water content, is mainly regulated by its interaction with the Yb(III) counterion. Mor…

Steric effectsYtterbiumPhotoluminescencechemistry.chemical_elementLIQUID-CRYSTALSPhotochemistryHeterocyclic Compounds 4 or More RingsMicellechemistry.chemical_compoundSpectroscopy Fourier Transform InfraredMaterials ChemistryWATEROrganic chemistryAOTYtterbiumPhysical and Theoretical ChemistryMicelleschemistry.chemical_classificationAza CompoundsSpectroscopy Near-InfraredCHIROPTICAL PROPERTIESSuccinatesSOLID-SOLID REACTIONSTATESurfaces Coatings and FilmsFT-IRSODIUM BIS(2-ETHYLHEXYL)SULFOSUCCINATEchemistryHeliceneSolubilizationSOLUBILIZATIONLUMINESCENCESpectrophotometry UltravioletCounterionThe Journal of Physical Chemistry B
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