Search results for "Statistical physics"

showing 10 items of 1402 documents

A two-scale approach to electron correlation in multiconfigurational perturbation theory.

2014

We present a new approach for the calculation of dynamic electron correlation effects in large molecular systems using multiconfigurational second-order perturbation theory (CASPT2). The method is restricted to cases where partitioning of the molecular system into an active site and an environment is meaningful. Only dynamic correlation effects derived from orbitals extending over the active site are included at the CASPT2 level of theory, whereas the correlation effects of the environment are retrieved at lower computational costs. For sufficiently large systems, the small errors introduced by this approximation are contrasted by the substantial savings in both storage and computational de…

Electronic correlationChemistryScale (descriptive set theory)General ChemistryMolecular systemsWhole systemsCorrelationComputational Mathematicscaspt2Atomic orbitalmultiscaleExcited stateStatistical physicsPerturbation theoryAtomic physicsJournal of computational chemistry
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The extended CC2 model ECC2

2013

We present a size-extensive extension to the CC2 model that avoids the complications with quasi-degeneracies that are present in the CC2 model and related perturbation theory-based approaches. The formulation also provides a consistent model for treating different parts of a molecular system at different levels of electron correlation. Such a subsystem approach leads to large reductions in the computational requirements without compromising the accuracy. In this initial study, we focus on static molecular properties. © 2013 Copyright Taylor and Francis Group, LLC.

Electronic correlationComputer scienceECC2BiophysicsExtension (predicate logic)Condensed Matter Physicelectron correlationCondensed Matter PhysicsCoupled clusterBiophysiccoupled clusterStatistical physicsAtomic physicsPerturbation theoryPhysical and Theoretical ChemistryFocus (optics)Molecular Biologysubsystem
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Monte Carlo simulation of DNA electrophoresis

1989

This paper describes an attempt to study the electrophoresis mobility of a DNA molecule in a gel by means of a Monte Carlo simulation. We find that the electrophoresis mobility mu can be well described by the empirical equation mu v kappa 1/N + kappa 2E2 with N being the number of monomers of the model chain and E being the applied field. For small E the data can merge into the linear response result mu = kappa 1/N. The paper also discusses necessary extensions of the present approach.

ElectrophoresisPhysicsQuantitative Biology::BiomoleculesGel electrophoresis of nucleic acidsClinical BiochemistryMonte Carlo methodMarkov chain Monte CarloDNABiochemistryAnalytical ChemistryMolecular WeightHybrid Monte CarloElectrophoresissymbols.namesakeModels ChemicalsymbolsDynamic Monte Carlo methodComputer SimulationStatistical physicsGelsKappaMonte Carlo molecular modelingElectrophoresis
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Computational nuclear quantum many-body problem: The UNEDF project

2013

The UNEDF project was a large-scale collaborative effort that applied high-performance computing to the nuclear quantum many-body problem. The primary focus of the project was on constructing, validating, and applying an optimized nuclear energy density functional, which entailed a wide range of pioneering developments in microscopic nuclear structure and reactions, algorithms, high-performance computing, and uncertainty quantification. UNEDF demonstrated that close associations among nuclear physicists, mathematicians, and computer scientists can lead to novel physics outcomes built on algorithmic innovations and computational developments. This review showcases a wide range of UNEDF scien…

Energy density functionalNuclear Theoryta114Computer scienceFOS: Physical sciencesGeneral Physics and AstronomyComputerApplications_COMPUTERSINOTHERSYSTEMSSupercomputerNuclear Theory (nucl-th)Many-body problemRange (mathematics)Hardware and ArchitectureSystems engineeringStatistical physicsUncertainty quantificationQuantumNuclear theoryComputer Physics Communications
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Free Energy, Enthalpy and Entropy from Implicit Solvent End-Point Simulations

2018

Free energy is the key quantity to describe the thermodynamics of biological systems. In this perspective we consider the calculation of free energy, enthalpy and entropy from end-point molecular dynamics simulations. Since the enthalpy may be calculated as the ensemble average over equilibrated simulation snapshots the difficulties related to free energy calculation are ultimately related to the calculation of the entropy of the system and in particular of the solvent entropy. In the last two decades implicit solvent models have been used to circumvent the problem and to take into account solvent entropy implicitly in the solvation terms. More recently outstanding advancement in both impli…

Energy estimationEnthalpyContinuum solvent Enthalpy Entropy Free energy Implicit solvent MM/GBSA Molecular dynamics simulationscontinuum solvent010402 general chemistry01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)BiochemistryMolecular dynamicsenthalpy0103 physical sciencesMolecular BiosciencesStatistical physicsPhysics::Chemical PhysicsMolecular Biologylcsh:QH301-705.5PhysicsMM/GBSAQuantitative Biology::BiomoleculesEnd point010304 chemical physicsEnsemble averageSolvationimplicit solventmolecular dynamics simulationsfree energy0104 chemical sciencesSolventlcsh:Biology (General)Solvent modelsPerspectiveentropyFrontiers in Molecular Biosciences
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Multipactor prediction with multi-carrier signals: Experimental results and discussions on the 20-gap-crossing rule

2014

This work analyzes the 20-gap crossing rule from a theoretical point of view. It has been found that, depending on some signal parameters, the 20-gap-crossing rule yields predictions laying between two limit cases: It may be either excessively conservative or closer to breakdown value with little (or nonexistent) margin. Such limit cases have been experimentally assessed with two test campaigns in C and Ku-bands. © 2014 European Association on Antennas and Propagation.

EngineeringWork (thermodynamics)business.industryMargin (machine learning)Electronic engineeringMulti carrierPoint (geometry)Statistical physicsLimit (mathematics)businessSignalGap crossingThe 8th European Conference on Antennas and Propagation (EuCAP 2014)
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On the validity of non-Markovian master equation approaches for the entanglement dynamics of two-qubit systems

2010

In the framework of the dissipative dynamics of coupled qubits interacting with independent reservoirs, a comparison between non-Markovian master equation techniques and an exact solution is presented here. We study various regimes in order to find the limits of validity of the Nakajima–Zwanzig and the time-convolutionless master equations in the description of the entanglement dynamics. A comparison between the performances of the concurrence and the negativity as entanglement measures for the system under study is also presented.

Entanglement Open quantum systems Non-Markovian master equationsDynamics (mechanics)Markov processConcurrenceQuantum PhysicsQuantum entanglementCondensed Matter PhysicsAtomic and Molecular Physics and Opticssymbols.namesakeExact solutions in general relativityClassical mechanicsQubitMaster equationsymbolsStatistical physicsDissipative dynamicsMathematical PhysicsMathematicsPhysica Scripta
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Critical behavior of short range Potts glasses

1993

We study by means of Monte Carlo simulations and the numerical transfer matrix technique the critical behavior of the short rangep=3 state Potts glass model in dimensionsd=2,3,4 with both Gaussian and bimodal (±J) nearest neighbor interactions on hypercubic lattices employing finite size scaling ideas. Ind=2 in addition the degeneracy of the glass ground state is computed as a function of the number of Potts states forp=3, 4, 5 and compared to that of the antiferromagnetic ground state. Our data indicate a transition into a glass phase atT=0 ind=2 with an algebraic singularity, aT=0 transition ind=3 with an essential singularity of the form χ∼exp(const.T−2), and an algebraic singularity atT…

Essential singularityPhysicsSpin glassSingularityGeneral Materials ScienceStatistical physicsCondensed Matter PhysicsGround stateTransfer matrixCritical dimensionCritical exponentElectronic Optical and Magnetic MaterialsPotts modelZeitschrift f�r Physik B Condensed Matter
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INTERFACE TENSION AND CORRELATION LENGTH OF 2D POTTS MODELS: NUMERICAL VERSUS EXACT RESULTS

1994

I briefly review new analytical formulas for the correlation length and interface tension of two-dimensional q-state Potts models and compare them with numerical results from recent Monte Carlo simulation studies.

Exact resultsComputational Theory and MathematicsTension (physics)Interface (Java)Monte Carlo methodGeneral Physics and AstronomyStatistical and Nonlinear PhysicsStatistical physicsMathematical PhysicsComputer Science ApplicationsMathematicsPotts modelInternational Journal of Modern Physics C
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Dynamical scaling of surface growth in simple lattice models

2003

We present extensive simulations of the atomistic Edwards-Wilkinson (EW) and Restricted Edwards-Wilkinson (REW) models in 2+1 dimensions. Dynamic finite-size scaling analyses of the interfacial width and structure factor provide the estimates for the dynamic exponent z=1.65+/-0.05 for the EW model and z=2.0+/-0.1 for the REW model. The stochastic contribution to the interface velocity U due to the deposition and diffusion of particles is characterized for both the models using a blocking procedure. For the EW model the time-displaced temporal correlations in U show nonexponential decay, while the temporal correlations decay exponentially for the REW model. Dynamical scaling of the temporal …

Exponential growthDynamical scalingLattice (order)ExponentAstrophysics::Cosmology and Extragalactic AstrophysicsStatistical physicsTemporal correlationStructure factorScalingMathematicsPhysical Review E
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