Search results for "Structure-Activity Relationship"

showing 10 items of 743 documents

The Important Role of the Nuclearity, Rigidity, and Solubility of Phosphane Ligands in the Biological Activity of Gold(I) Complexes

2018

A series of 4-ethynylaniline gold(I) complexes containing monophosphane (1,3,5-triaza-7-phosphaadamantane (pta; 2), 3,7-diacetyl-1,3,7-triaza-5-phosphabicyclo[3.3.1]nonane (3), and PR3 , with R=naphthyl (4), phenyl (5), and ethyl (6)) and diphosphane (bis(diphenylphosphino)acetylene (dppa; 7), trans-1,2-bis(diphenylphosphino)ethene (dppet; 8), 1,2-bis(diphenylphosphino)ethane (dppe; 9), and 1,3-bis(diphenylphosphino)propane (dppp; 10)) ligands have been synthesized and their efficiency against tumor cells evaluated. The cytotoxicity of complexes 2-10 was evaluated in human colorectal (HCT116) and ovarian (A2780) carcinoma as well as in normal human fibroblasts. All the complexes showed a hi…

FosfinaMolecular ConformationOrCrystal structureCrystallography X-RayLigandsMedicinal chemistry01 natural scienceskultachemistry.chemical_compoundCoordination ComplexesDiphosphaneSolubilityCytotoxicityta116bcl-2-Associated X ProteinMembrane Potential Mitochondrialbioaktiiviset yhdisteetBiological activitybiological activity of gold(I) complexesAcetyleneProto-Oncogene Proteins c-bcl-2rigidityCompostos d'ornuclearityPhosphineCell SurvivalPhosphinesAntineoplastic Agentsphosphane ligands010402 general chemistryCatalysisCell LineStructure-Activity RelationshipMoleculeHumans010405 organic chemistrysolubilityOrganic ChemistryGeneral ChemistrykompleksiyhdisteetHCT116 Cells0104 chemical sciencesLligandschemistryQuantum TheoryGoldNonaneReactive Oxygen SpeciesGold compoundsChemistry: A European Journal
researchProduct

Design, synthesis, and biological evaluation of thiophene analogues of chalcones.

2008

Chalcones are characterized by possessing an enone moiety between two aromatic rings. A series of chalcone-like agents, in which the double bond of the enone system is embedded within a thiophene ring, were synthesized and evaluated for antiproliferative activity and inhibition of tubulin assembly and colchicine binding to tubulin. The replacement of the double bond with a thiophene maintains antiproliferative activity and therefore must not significantly alter the relative conformation of the two aryl rings. The synthesized compounds were found to inhibit the growth of several cancer cell lines at nanomolar to low micromolar concentrations. In general, all compounds having significant anti…

G2 PhaseModels MolecularDouble bondStereochemistryClinical BiochemistryPharmaceutical ScienceEtherAntineoplastic Agentsmacromolecular substancesThiophenesBiochemistryChemical synthesischemistry.chemical_compoundMiceStructure-Activity RelationshipChalconesTubulinCell Line TumorDrug DiscoveryThiopheneMoietyAnimalsHumansMolecular BiologyCell Proliferationchemistry.chemical_classificationBinding SitesbiologyDose-Response Relationship DrugMolecular StructureArylOrganic ChemistryCell CycleBrainStereoisomerismTubulin ModulatorsTubulinchemistryDrug Designbiology.proteinMolecular MedicineCattleDrug Screening Assays AntitumorColchicineK562 CellsEnoneCell DivisionHeLa CellsBioorganicmedicinal chemistry
researchProduct

The “Janus” Role of C/EBPs Family Members in Cancer Progression

2020

CCAAT/enhancer-binding proteins (C/EBPs) constitute a family of transcription factors composed of six members that are critical for normal cellular differentiation in a variety of tissues. They promote the expression of genes through interaction with their promoters. Moreover, they have a key role in regulating cellular proliferation through interaction with cell cycle proteins. C/EBPs are considered to be tumor suppressor factors due to their ability to arrest cell growth (contributing to the terminal differentiation of several cell types) and for their role in cellular response to DNA damage, nutrient deprivation, hypoxia, and genotoxic agents. However, C/EBPs can elicit completely opposi…

Gene isoformCell typeDNA damagetumor suppressorCellular differentiationReviewBiologyCatalysisInorganic Chemistrylcsh:ChemistryStructure-Activity RelationshipSettore BIO/13 - Biologia ApplicataNeoplasmsAnimalsHumansProtein IsoformscancerPhysical and Theoretical ChemistryCell Cycle ProteinMolecular BiologyTranscription factorlcsh:QH301-705.5SpectroscopyCell growthOrganic Chemistrytumor promoterPromoterGeneral MedicineC/EBPComputer Science ApplicationsCell biologyGene Expression Regulation Neoplasticlcsh:Biology (General)lcsh:QD1-999Multigene FamilyCCAAT-Enhancer-Binding ProteinsDisease ProgressionDisease SusceptibilityProtein BindingSignal TransductionInternational Journal of Molecular Sciences
researchProduct

Efficient Expression and Crystallization System of Cancer-Associated Carbonic Anhydrase Isoform IX.

2015

Human carbonic anhydrase IX (CA IX) is overexpressed in a number of solid tumors and is considered to be a marker for cellular hypoxia that it is not produced in most normal tissues. CA IX contributes to the acidification of the extracellular matrix, which, in turn, favors tumor growth and metastasis. Therefore, CA IX is considered to be a promising anti-cancer drug target. However, the ability to specifically target CA IX is challenging due to the fact that the human genome encodes 15 different carbonic anhydrase isoforms that have a high degree of homology. Furthermore, structure-based drug design of CA IX inhibitors so far has been largely unsuccessful due to technical difficulties regar…

Gene isoformModels MolecularAntineoplastic AgentsIsozymePichiaPichia pastorisSubstrate SpecificityStructure-Activity RelationshipX-Ray DiffractionAntigens NeoplasmCarbonic anhydraseNeoplasmsDrug DiscoverymedicineStructure–activity relationshipHumansCloning MolecularCarbonic Anhydrase IXCarbonic Anhydrase InhibitorsDatabases ProteinCarbonic Anhydraseschemistry.chemical_classificationbiologyChemistryLyasebiology.organism_classificationAcetazolamideIsoenzymesEnzymeBiochemistrybiology.proteinMolecular MedicineAcetazolamideCrystallizationBaculoviridaemedicine.drugJournal of medicinal chemistry
researchProduct

5-Substituted-benzylsulfanyl-thiophene-2-sulfonamides with effective carbonic anhydrase inhibitory activity: Solution and crystallographic investigat…

2017

Abstract A series of 5-substituted-benzylsulfanyl-thiophene-2-sulfonamides was prepared by reacting 5-bromo-thiophene-2-sulfonamide with 5-substituted-benzyl mercaptans. The new compounds were investigated as carbonic anhydrase (CA, EC 4.2.1.1) inhibitors. The cytosolic human (h) isoforms hCA I was poorly inhibited by the new sulfonamides (KIs in the range of 683–4250 nM), whereas hCA II, and the transmembrane, tumor associated isoforms hCA IX and XII were effectively inhibited in the subnanomolar–nanomolar range. A high resolution X-ray crystal structure of the adduct of hCA II with one of the new sulfonamides allowed us to rationalize the excellent inhibitory activity of these heterocycli…

Gene isoformModels MolecularStereochemistryClinical BiochemistryPharmaceutical ScienceCrystal structureThiophenesCrystallography X-Ray01 natural sciencesBiochemistryAdductchemistry.chemical_compoundStructure-Activity RelationshipCarbonic anhydraseDrug DiscoveryThiopheneHumansCarbonic Anhydrase InhibitorsMolecular BiologyCarbonic AnhydrasesSulfonamidesbiologyDose-Response Relationship DrugMolecular Structure010405 organic chemistryOrganic ChemistryLyaseTransmembrane protein0104 chemical sciencesSolutions010404 medicinal & biomolecular chemistryCytosolchemistrybiology.proteinMolecular MedicineBioorganicmedicinal chemistry
researchProduct

N-Substituted and ring opened saccharin derivatives selectively inhibit transmembrane, tumor-associated carbonic anhydrases IX and XII.

2017

A series of N-substituted saccharins incorporating aryl, alkyl and alkynyl moieties, as well as some ring opened derivatives were prepared and investigated as inhibitors of the metalloenzyme carbonic anhydrase (CA, EC 4.2.1.1). The widespread cytosolic isoforms CA I and II were not inhibited by these sulfonamides whereas transmembrane, tumor-associated ones were effectively inhibited, with KIs in the range of 22.1-481nM for CA IX and of 3.9-245nM for hCA XII. Although the inhibition mechanism of these tertiary/secondary sulfonamides is unknown for the moment, the good efficacy and especially selectivity for the inhibition of the tumor-associated over the cytosolic, widespread isoforms, make…

Gene isoformStereochemistryClinical BiochemistryPharmaceutical Science01 natural sciencesBiochemistrychemistry.chemical_compoundStructure-Activity RelationshipSaccharinAntigens NeoplasmCarbonic anhydraseDrug DiscoveryHumansCarbonic Anhydrase IXCarbonic Anhydrase InhibitorsMolecular BiologyAlkylCarbonic Anhydraseschemistry.chemical_classificationbiologyDose-Response Relationship DrugMolecular Structure010405 organic chemistryArylOrganic ChemistryTransmembrane protein0104 chemical sciences010404 medicinal & biomolecular chemistryCytosolEnzymechemistryBiochemistrybiology.proteinMolecular MedicineSelectivityBioorganicmedicinal chemistry
researchProduct

3H-1,2-benzoxathiepine 2,2-dioxides: a new class of isoform-selective carbonic anhydrase inhibitors

2017

Abstract A new chemotype with carbonic anhydrase (CA, EC 4.2.1.1) inhibitory action has been discovered, the homo-sulfocoumarins (3H-1,2-benzoxathiepine 2,2-dioxides) which have been designed considering the (sulfo)coumarins as lead molecules. An original synthetic strategy of a panel of such derivatives led to compounds with a unique inhibitory profile and very high selectivity for the inhibition of the tumour associated (CA IX/XII) over the cytosolic (CA I/II) isoforms. Although the CA inhibition mechanism with these new compounds is unknown for the moment, we hypothesize that it may be similar to that of the sulfocoumarins, i.e. hydrolysis to the corresponding sulfonic acids which therea…

Gene isoformStereochemistryHigh selectivityInhibitory postsynaptic potential01 natural sciencesStructure-Activity RelationshipHydrolysisCarbonic anhydraseDrug DiscoveryHumansMoleculeCarbonic Anhydrase InhibitorsCarbonic AnhydrasesPharmacologyCarbonic anhydraseDose-Response Relationship DrugMolecular Structurebiology010405 organic chemistryChemistrylcsh:RM1-950Active sitehomo-sulfocoumarinsGeneral MedicineCyclic S-Oxides0104 chemical sciencesinhibitor010404 medicinal & biomolecular chemistryCytosollcsh:Therapeutics. PharmacologyBiochemistrysulfocoumarinbiology.proteinResearch PaperJournal of Enzyme Inhibition and Medicinal Chemistry
researchProduct

Experimental-Like Affinity Constants and Enantioselectivity Estimates from Flexible Docking

2012

Experimental-like affinity constants and enantioselectivity estimates, not predicted so far computationally, were obtained using a novel flexible modeling/docking combined strategy. The S- and R-warfarin-human serum albumin (HSA, site I) complexes were used as an interaction model. The process for a verified estimation includes the following: (i) ionized open chain forming at physiological pH (a recent focus); (ii) conformational search (molecular mechanics and Monte Carlo methods); (iii) rigid protein-flexible ligand docking (GlideXP) generating low energy paired S- and R-poses; (iv) graphical comparison against the X-ray crystal structure (unsatisfactory verification step); (v) quantum po…

General Chemical EngineeringMonte Carlo methodCrystal structureLibrary and Information SciencesCrystallography X-RayStructure-Activity RelationshipLow energyComputational chemistryHumansSerum AlbuminBinding SitesChemistryHydrogen BondingStereoisomerismInteraction modelGeneral ChemistryHydrogen-Ion ConcentrationComputer Science ApplicationsMolecular Docking SimulationKineticsResearch DesignDocking (molecular)Quantum TheoryThermodynamicsWarfarinMonte Carlo MethodAlgorithmsProtein BindingJournal of Chemical Information and Modeling
researchProduct

The longevity assurance homologue of yeast lag1 (Lass) gene family (Review)

2009

The Lass gene family contains a group of highly conserved genes that are found in eukaryotic species. The founding member, lag1, was discovered in a screen for yeast longevity genes. Subsequently, lag1 homologs were discovered in other organisms including six mammalian paralogs. All Lass genes encode a highly conserved Lag1 domain and many also have an additional Hox domain. Lass proteins are ceramide synthases and therefore are critical for ceramide biosynthesis. Ceramide synthase is also a critical enzyme in the sphingolipid biosynthetic pathway. As ceramide and sphingolipids are key intermediates in diverse cellular processes such as cell growth, apoptosis, and stress response and may al…

GeneticsCeramideMolecular Sequence DataMembrane ProteinsGeneral MedicineBiologyCeramidesModels BiologicalSphingolipidStructure-Activity Relationshipchemistry.chemical_compoundProtein structurechemistryNeoplasmsSphingosine N-AcyltransferaseGeneticsAnimalsHumansGene familyAmino Acid SequenceOxidoreductasesHox geneCeramide synthaseGeneFunction (biology)International Journal of Molecular Medicine
researchProduct

Parvovirus B19 Genotype Specific Amino Acid Substitution in NS1 Reduces the Protein's Cytotoxicity in Culture

2010

A clinical association between idiopathic liver disease and parvovirus B19 infection has been observed. Fulminant liver failure, not associated with other liver-tropic viruses, has been attributed to B19 in numerous reports, suggesting a possible role for B19 components in the extensive hepatocyte cytotoxicity observed in this condition. A recent report by Abe and colleagues (Int J Med Sci. 2007;4:105-9) demonstrated a link between persistent parvovirus B19 genotype I and III infection and fulminant liver failure. The genetic analysis of isolates obtained from these patients demonstrated a conservation of key amino acids in the nonstructural protein 1 (NS1) of the disease-associated genotyp…

GenotypevirusesCytotoxicityApoptosisViral Nonstructural ProteinsProtein SParvoviruschemistry.chemical_compoundLiver diseaseStructure-Activity Relationshiphemic and lymphatic diseasesGenotypemedicineParvovirus B19 HumanHumansCytotoxicitychemistry.chemical_classificationMethioninebiologyParvovirusB19Fulminant Liver Failurevirus diseasesGeneral MedicineHep G2 Cellsmedicine.diseasebiology.organism_classificationFlow CytometryVirologyAmino acidmedicine.anatomical_structurechemistryAmino Acid SubstitutionHepatocytebiology.proteinResearch PaperInternational Journal of Medical Sciences
researchProduct