Search results for "Superresolution"
showing 10 items of 24 documents
Quantitative super-resolution localization microscopy of DNA in situ using Vybrant® DyeCycle™ Violet fluorescent probe.
2016
Single Molecule Localization Microscopy (SMLM) is a recently emerged optical imaging method that was shown to achieve a resolution in the order of tens of nanometers in intact cells. Novel high resolution imaging methods might be crucial for understanding of how the chromatin, a complex of DNA and proteins, is arranged in the eukaryotic cell nucleus. Such an approach utilizing switching of a fluorescent, DNA-binding dye Vybrant® DyeCycle™ Violet has been previously demonstrated by us (Żurek-Biesiada et al., 2015) [1]. Here we provide quantitative information on the influence of the chemical environment on the behavior of the dye, discuss the variability in the DNA-associated signal density,…
Super-resolution binding activated localization microscopy through reversible change of DNA conformation
2018
ABSTRACT Methods of super-resolving light microscopy (SRM) have found an exponentially growing range of applications in cell biology, including nuclear structure analyses. Recent developments have proven that Single Molecule Localization Microscopy (SMLM), a type of SRM, is particularly useful for enhanced spatial analysis of the cell nucleus due to its highest resolving capability combined with very specific fluorescent labeling. In this commentary we offer a brief review of the latest methodological development in the field of SMLM of chromatin designated DNA Structure Fluctuation Assisted Binding Activated Localization Microscopy (abbreviated as fBALM) as well as its potential future app…
Lensless object scanning holography for two-dimensional mirror-like and diffuse reflective objects
2013
Recently proposed lensless object scanning holography (LOSH) [Opt. Express 20, 9382 (2012)] is a fully lensless method capable of improving the image quality in digital Fourier holography applied to one-dimensional (1D) reflective objects and it involves a very simplified experimental setup. LOSH is based on the recording and digital postprocessing of a set of digital lensless Fourier transform holograms, which finally results in a synthetic image with improved resolution, field-of-view (FOV), signal-to-noise ratio (SNR), and depth of field. In this paper, LOSH is extended to the cases of two-dimensional (2D) mirror-like and 1D diffuse-based objects. For 2D mirror-like objects, the experime…
Investigating the performance of reconstruction methods used in structured illumination microscopy as a function of the illumination pattern's modula…
2016
Surpassing the resolution of optical microscopy defined by the Abbe diffraction limit, while simultaneously achieving optical sectioning, is a challenging problem particularly for live cell imaging of thick samples. Among a few developing techniques, structured illumination microscopy (SIM) addresses this challenge by imposing higher frequency information into the observable frequency band confined by the optical transfer function (OTF) of a conventional microscope either doubling the spatial resolution or filling the missing cone based on the spatial frequency of the pattern when the patterned illumination is two-dimensional. Standard reconstruction methods for SIM decompose the low and hi…
Geometrical super resolved lensless imaging
2011
In the field of super resolution researchers are trying to overcome both the diffraction as well as the geometrical bounds of an imaging system. In this paper we present a recently developed approach that aims to overcome the geometrical bounds while using a unified spatial light modulator (SLM) based lensless configuration.
Super resolved optical system for objects with finite sizes using circular gratings
2015
We present a real time all optical super resolution method for exceeding the diffraction limit of an imaging system which has a circular aperture. The resolution improvement is obtained using two fixed circular gratings which are placed in predetermined positions. The circular gratings generate synthetic circular duplications of the aperture, thus they are the proper choice for a circular aperture optical system. The method is applicable for both spatially coherent and incoherent illuminations, as well as for white light illumination. The resolution improvement is achieved by limiting the object field of view. The proposed method is presented analytically, demonstrated via numerical simulat…
Statistical Performance Analysis of a Fast Super-Resolution Technique Using Noisy Translations.
2014
It is well known that the registration process is a key step for super-resolution reconstruction. In this work, we propose to use a piezoelectric system that is easily adaptable on all microscopes and telescopes for controlling accurately their motion (down to nanometers) and therefore acquiring multiple images of the same scene at different controlled positions. Then a fast super-resolution algorithm \cite{eh01} can be used for efficient super-resolution reconstruction. In this case, the optimal use of $r^2$ images for a resolution enhancement factor $r$ is generally not enough to obtain satisfying results due to the random inaccuracy of the positioning system. Thus we propose to take seve…
Applications of Super Resolution Expansion Microscopy in Yeast
2021
Super-resolution microscopy includes multiple techniques in optical microscopy that enable sub-diffraction resolution fluorescence imaging of cellular structures. Expansion microscopy (EXM) is a method of physical expansion to obtain super-resolution images of a biological sample on conventional microscopy. We present images of yeast organelles, applying the combination of super-resolution and ExM techniques. When preparing pre-expanded samples, conventional methods lead to breakage of dividing yeast cells and difficulties in studying division-related proteins. Here, we describe an improved sample preparation technique that avoids such damage. ExM in combination with Airyscan and structured…
Super resolving optical system based on spectral dilation
2004
Time multiplexing is a common approach for achieving super resolution. The basic method involves moving two grating one is in front of the object and the other one in front of the camera. In this paper, we present a novel approach for obtaining super resolution not by shifting a grating, but by using its various dilations for obtaining the required encoding and decoding of information.
High-resolution deep view microscopy of cells and tissues
2020
Abstract Methods, experimental setups and perspectives of three-dimensional deep view imaging microscopy of cell or tissue samples are reported. Preliminary biophysical and clinically relevant examples are presented.