Search results for "Systematics"

Recent mathematical approaches to reconstruct phylogenies: A chemosystematist's and botanist's view

1989

Some basic problems of mathematical phylogenetics are discussed. While algorithms regularly depend on the principle of parsimony, some features of phylogenesis interfere with that principle. Nonrandomness of the distribution of mutations as well as the inconstancy of the molecular clock in time and within a given sequence can bias the calculated relationships of closely related taxa. True comparability of sequences is difficult to establish, since this requires defining of homology of positions and of functions of amino acids as well. Parallelism and convergence can give rise to errors in establishing homology. Furthermore, they are difficult to be integrated into a consistent mathematical …

Cracking the nut: Geographical adjacency of sister taxa supports vicariance in a polytomic salamander clade in the absence of node support

2008

The urodelan genus Lyciasalamandra, which inhabits a relatively small area along the southern Turkish coast and some Aegean islands, provides an outstanding example of a diverse but phylogenetically unresolved taxon. Molecular trees contain a single basal polytomy that could be either soft or hard. We here use the information of nuclear (allozymes) and mitochondrial (fractions of the 16S rRNA and ATPase genes) datasets in combination with area relationships of lineages to resolve the phylogenetic relationships among Lyciasalamandra species in the absence of sufficient node support. We can show that neither random processes nor introgressive hybridization can be invoked to explain that the m…

Differential influence of two acanthocephalan parasites on the antipredator behaviour of their common intermediate host

2007

7 pages; International audience; Fish acanthocephalans can modify the antipredator behaviour of their intermediate hosts in response to cues from fish predators. However, it is still unclear whether such behavioural changes are adaptive, or are just the consequence of infection. We addressed this question through studying two acanthocephalans, Pomphorhynchus laevis and Polymorphus minutus, and their intermediate host, the amphipod Gammarus pulex. Pomphorhynchus laevis completes its cycle in a freshwater fish, whereas P. minutus exploits waterbirds as final hosts.We first assessed vulnerability of infected and uninfected gammarids to predation by bullheads, Cottus gobio. Pomphorhynchus laevi…

The use of Markovian metapopulation models: a comparison of three methods reducing the dimensionality of transition matrices.

2001

The use of Markovian models is an established way for deriving the complete distribution of the size of a population and the probability of extinction. However, computationally impractical transition matrices frequently result if this mathematical approach is applied to natural populations. Binning, or aggregating population sizes, has been used to permit a reduction in the dimensionality of matrices. Here, we present three deterministic binning methods and study the errors due to binning for a metapopulation model. Our results indicate that estimation errors of the investigated methods are not consistent and one cannot make generalizations about the quality of a method. For some compared o…

Territorial defense, territory size, and population regulation.

2005

The carrying capacity of an environment is determined partly by how individuals compete over the available resources. To territorial animals, space is an important resource, leading to conflict over its use. We build a model where the carrying capacity for an organism in a given environment results from the evolution of territorial defense effort and the consequent space use. The same evolutionary process can yield two completely different modes of population regulation. Density dependence arises through expanding and shrinking territories if fecundity is low, breeding success increases gradually with territory size, and/or defense is cheap. By contrast, when fecundity is high, breeding suc…

Population Decline of the Capercaillie Tetrao urogallus aquitanicus in the Central Pyrenees

2020

El seguimiento a largo plazo de las aves amenazadas es esencial para estimar las tendencias poblacionales e identificar las posibles causas de declive, siendo particularmente importante en el caso de las aves alpinas que habitan en areas montanosas en los limites de su area de distribucion. Analizamos la tendencia poblacional del urogallo en los Pirineos centrales espanoles a partir de investigaciones realizadas entre 2000 y 2017. Encontramos un declive significativo de la poblacion (alrededor del 58%) en el numero de aves contadas en las areas de exhibicion (lek). la mayoria de los urogallos habitan bosques de coniferas de pino negro con una cobertura elevada de arandano y rododendro en el…

Impact of landscape on spatial genetic structure and diversity ofCoenagrion mercuriale(Zygoptera:Coenagrionidae) in northern France

2015

AbstractLoss and fragmentation of habitat is a current main cause of biodiversity loss in freshwater habitats. Odonates (dragonflies and damselflies) depend on these habitats to complete their development. Fragmentation may be a particular threat for odonates because it generates a network of small habitat patches within which populations could suffer from isolation and loss of genetic diversity. The southern damselfly Coenagrion mercuriale is categorized on the IUCN red list as Near Threatened, largely because of population fragmentation and demographic declines associated with changes in land use. Small populations at the margin of this species’ range are of particular concern because the…

Phylogeographical structure in the coastal speciesSenecio rodriguezii(Asteraceae), a narrowly distributed endemic Mediterranean plant

2009

Aim Our goals were (1) to assess the levels of chloroplast DNA variation in a narrowly distributed plant restricted to continental islands, (2) to ascertain whether a phylogeographical structure is present in plants restricted to coastal linear systems, and (3) to interpret the results in the light of the known palaeogeography of these islands. Location The Eastern Balearic Islands (Majorca and Minorca) in the Western Mediterranean Basin. Methods Sampling included 134 individuals from 28 populations of Senecio rodriguezii covering the entire range of the species. Sequences of the chloroplast genome (trnT-trnL spacer) were obtained and parameters of population genetic diversity and substruct…

Kin interactions and population growth

2011

Changes in epizoic crustacean infestations during cetacean die-offs: the mass mortality of Mediterranean striped dolphins Stenella coeruleoalba revis…

2006

In the summer and autumn of 1990, a cetacean morbillivirus caused a massive epizootic mortality of striped dolphins Stenella coeruleoalba in the western Mediterranean. Previous circum- stantial evidence suggested that the disease could also have increased host susceptibility to infesta- tions with epizoic crustaceans. In this study we provide strong evidence supporting this hypothesis. We examined striped dolphins stranded along the Mediterranean central coast of Spain from 1981 to 2004 (n = 136), and recorded data on prevalence, intensity of infestation, size and reproductive status of 2 sessile crustacean species specific to cetaceans, the phoront cirriped Xenobalanus globicipitis and the…