Search results for "TPA"

showing 10 items of 770 documents

Nitric oxide inhibits the ATPase activity of the chaperone-like AAA+ ATPase CDC48, a target for S-nitrosylation in cryptogein signalling in tobacco c…

2012

NO has important physiological functions in plants, including the adaptative response to pathogen attack. We previously demonstrated that cryptogein, an elicitor of defence reaction produced by the oomycete Phytophthora cryptogea , triggers NO synthesis in tobacco. To decipher the role of NO in tobacco cells elicited by cryptogein, in the present study we performed a proteomic approach in order to identify proteins undergoing S-nitrosylation. We provided evidence that cryptogein induced the S-nitrosylation of several proteins and identified 11 candidates, including CDC48 (cell division cycle 48), a member of the AAA+ ATPase (ATPase associated with various cellular activities) family. In vit…

Models Molecular0106 biological sciencesProtein Conformation[SDV]Life Sciences [q-bio]Nicotiana tabacumATPaseMolecular Sequence DataCell Cycle ProteinsNitric Oxide01 natural sciencesBiochemistrycryptogeinFungal Proteins03 medical and health sciencesValosin Containing ProteinTobaccoAmino Acid Sequencenitric oxide (no)Molecular BiologyPlant Proteins030304 developmental biologyAdenosine Triphosphatases0303 health sciencesbiologyWalker motifsCell BiologyS-Nitrosylationcell division cycle 48 (cdc48)Biotic stressbiology.organism_classificationAAA proteinsProtein Structure TertiaryElicitorBiochemistryChaperone (protein)[SDE]Environmental Sciencesbiology.proteins-nitrosylationplant defence responses010606 plant biology & botanyBiochemical Journal
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2,8-Diazido-ATP — a short-length bifunctional photoaffinity label for photoaffinity cross-linking of a stable F1 in ATP synthase (from thermophilic b…

1995

Abstract To demonstrate the direct interfacial position of nucleotide binding sites between subunits of proteins we have synthesized the bifunctional photoaffinity label 2,8-diazidoadenosine 5′-triphosphate (2,8-DiN3ATP). UV irradiation of the F1-ATPase (TF1) from the thermophilic bacterium PS3 in the presence of 2,8-DiN3ATP results in a nucleotide-dependent inactivation of the enzyme and in a nucleotide-dependent formation of α-β crosslinks. The results confirm an interfacial localization of all the nucleotide binding sites on TF1.

Models MolecularAzidesNucleotide binding siteLightStereochemistryImmunoblottingBiophysicsDirect interfacial localizationShort lengthBiochemistry8-azidoadenosine 5'-triphosphatechemistry.chemical_compoundAdenosine TriphosphateStructural BiologyGeneticsNucleotide binding sitesBifunctionalMolecular BiologyThermophilic bacterium PS3Photoaffinity cross-linkingchemistry.chemical_classificationATP synthasebiologyBacteriaThermophileAffinity LabelsCell BiologyProton-Translocating ATPasesEnzymeCross-Linking ReagentsBiochemistrychemistrybiology.proteinF1-ATPase: Short-length bifunctional photoaffinity labelFEBS Letters
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The Parkinson Disease Gene LRRK2: Evolutionary and Structural Insights

2006

Mutations in the human leucine-rich repeat kinase 2 (LRRK2) gene are associated with both familial and sporadic Parkinson disease (PD). LRRK2 belongs to a gene family known as Roco. Roco genes encode for large proteins with several protein domains. Particularly, all Roco proteins have a characteristic GTPase domain, named Roc, plus a domain of unknown function called COR. In addition, LRRK2 and several other Roco proteins also contain a protein kinase domain. In this study, I use a combination of phylogenetic and structural analyses of the COR, Roc, and kinase domains present in Roco proteins to describe the origin and evolutionary history of LRRK2. Phylogenetic analyses using these domains…

Models MolecularProtein ConformationMolecular Sequence DataProtein domainGTPaseProtein Serine-Threonine KinasesBiologyLeucine-Rich Repeat Serine-Threonine Protein Kinase-2MAP3K7SH3 domainGTP PhosphohydrolasesEvolution MolecularGeneticsAnimalsHumansDictyosteliumAmino Acid Sequencec-RafMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsGeneticsSequence Homology Amino AcidParkinson DiseaseLRRK2Protein Structure Tertiarynervous system diseasesDisease Models AnimalProtein kinase domainRabProtein KinasesMolecular Biology and Evolution
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Structural insights into the GTPase domain of Escherichia coli MnmE protein

2007

The Escherichia coli MnmE protein is a 50-kDa multidomain GTPase involved in tRNA modification. Its homologues in eukaryotes are crucial for mitochondrial respiration and, thus, it is thought that the human protein might be involved in mitochondrial diseases. Unlike Ras, MnmE shows a high intrinsic GTPase activity and requires effective GTP hydrolysis, and not simply GTP binding, to be functionally active. The isolated MnmE G-domain (165 residues) conserves the GTPase activity of the entire protein, suggesting that it contains the catalytic residues for GTP hydrolysis. To explore the GTP hydrolysis mechanism of MnmE, we analyzed the effect of low pH on binding and hydrolysis of GTP, as well…

Models MolecularTRNA modificationMagnetic Resonance SpectroscopyGTP'aluminium fluoridehomology modelingMolecular Sequence DataGTPaseGuanosine triphosphateGuanosine DiphosphateBiochemistryeraGTP Phosphohydrolaseschemistry.chemical_compoundStructural BiologyEscherichia coliAmino Acid SequenceHomology modelingBinding siteGTPaseMolecular BiologyBinding SitesSequence Homology Amino AcidChemistryEscherichia coli ProteinsTrmENMRRecombinant ProteinsKineticsBiochemistryMnmEGuanosine diphosphateRap2AGTP PhosphohydrolasesGuanosine TriphosphateSequence AlignmentRasProteins: Structure, Function, and Bioinformatics
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8-N(3)-3'-biotinyl-ATP, a novel monofunctional reagent: differences in the F(1)- and V(1)-ATPases by means of the ATP analogue.

2001

A novel photoaffinity label, 8-N(3)-3'-biotinyl-ATP, has been synthesized. The introduction of an additional biotin residue is advantageous for easy detection of labeled proteins. This could be first tested by reaction with the F(1)-ATPase from the thermophilic bacterium PS3 (TF(1)). UV irradiation of TF(1) in the presence of 8-N(3)-3'-biotinyl-ATP results in a nucleotide-dependent binding of the analogue in the noncatalytic alpha and the catalytic beta subunits of TF(1), demonstrating the suitability of this analogue as a potential photoaffinity label. Reaction with the V(1)-ATPase, however, led to labeling of subunit E, which has been suggested as a structural and functional homologue of …

Models MolecularVacuolar Proton-Translocating ATPasesTime FactorsUltraviolet RaysProtein subunitATPaseBiophysicsCoated vesicleBiotinPhotoaffinity LabelsPhotoaffinity LabelsBiochemistryCatalysischemistry.chemical_compoundAdenosine TriphosphateBiotinBacterial ProteinsManducaAnimalsBinding siteMolecular BiologyBinding SitesPhotoaffinity labelingbiologyChemistryCell BiologyProton-Translocating ATPasesBiochemistryModels ChemicalSpectrophotometrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationbiology.proteinCattleGamma subunitProtein BindingBiochemical and biophysical research communications
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Effects of transcutaneous electrical nerve stimulation on pain after impacted third molar surgery.

2018

Background The aim of this study was to assess the therapeutic effects of Transcutaneous Electrical Nerve Stimulation (TENS) on pain after the impacted third molar surgery. Material and Methods The study was carried out on 30 patients attending the outpatient department of the oral and maxillofacial surgery. Both sides’ impacted mandibular third molars were taken into consideration, and a total of 60 impacted third molars were undergone surgical extraction. After the first surgery, patients were given analgesic, antibiotics, and mouthwash as a routine treatment procedure. Following the second surgery, TENS was applied over the painful area of the cheek for patients in addition to routine tr…

MolarAdultMaleVisual analogue scaleAnalgesicTranscutaneous electrical nerve stimulationlaw.invention03 medical and health sciencesYoung Adult0302 clinical medicinelawMedicineOutpatient clinicHumansGeneral DentistryPain MeasurementPain Postoperativebusiness.industryResearchTherapeutic effectTooth Impacted030206 dentistryCheek:CIENCIAS MÉDICAS [UNESCO]medicine.anatomical_structureOtorhinolaryngologyAnesthesiaUNESCO::CIENCIAS MÉDICASOral and maxillofacial surgeryTranscutaneous Electric Nerve StimulationSurgeryFemaleMolar ThirdOral SurgerybusinessMedicina oral, patologia oral y cirugia bucal
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Ultracytochemical localization of Ca2(+)-ATPase activity in the middle ear mucosa of the guinea pig.

1989

Ca2(+)-ATPase activity was studied ultra-cytochemically in the middle ear mucosa of the guinea pig. On electron microscopic examination, the most intense reaction was found on the microvilli. Reaction products were also observed on the cilia and around and between the secretory granules on the apical side of the cells in their secretory phase. The basolateral membranes contained few reaction products, while very little or no activity was found on the basal membrane.

Mucous MembranebiologyMicrovillibusiness.industryATPaseCiliumGuinea PigsEar MiddleGeneral MedicineCalcium-Transporting ATPasesMolecular biologyGuinea pigCalcium ATPaseMembranemedicine.anatomical_structureOtorhinolaryngologyBiochemistryMiddle earbiology.proteinCytochemistryMedicineAnimalsbusinessIon transporterArchives of oto-rhino-laryngology
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T-patterns in the study of movement and behavioral disorders

2020

Aim of the present review is to offer an outline of the application of T-pattern analysis (TPA) in the study of neurological disorders characterized by anomalies of movement and, more in general, of behavior. TPA is a multivariate technique to detect real time patterns of behavior on the basis of statistically significant constraints among the events in sequence. TPA is particularly suitable to analyse the structure of behavior. The application of TPA to study movement and behavioral disorders is able to offer, with a high level of detail, hidden characteristics of behavior otherwise impossible to detect. For its intrinsic features, TPA is completely different not only from quantitative eva…

Multivariate statisticsQuantitative EvaluationsExperimental and Cognitive PsychologyNeuropsychological TestsSettore BIO/09 - Fisiologia03 medical and health sciencesBehavioral NeuroscienceBehavior disorderTime pattern0302 clinical medicineAnimalsHumans0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyMultivariate techniqueMovement disorderMovement Disordersintegumentary systemMovement (music)Mental Disorders05 social sciencesT-pattern analysiMultivariate AnalysisBehavioral disorderTPATransition matricesPsychologyAlgorithms030217 neurology & neurosurgeryCognitive psychology
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Effect of radiofrequency and pelvic floor muscle training in the treatment of women with vaginal laxity: A study protocol

2021

Background Vaginal laxity is an underreported condition that negatively affects women’s sexual function and their relationships. Evidence-based studies are needed to better understand this complaint and to discuss its treatment options. Thus, we present a study protocol to compare the effect of radiofrequency and pelvic floor muscle training in the treatment of women with complaints of vaginal laxity. Methods/Design This is a prospective, parallel-group, two-arm, randomized clinical trial (Registry: RBR-2zdvfp–REBEC). Participants will be randomly assigned to one of the two groups of intervention (Radiofrequency or Pelvic Floor Muscle Training). The study will be performed in the Urogyneco…

Muscle PhysiologyMuscle FunctionsPhysiologyRadio WavesMaternal HealthAmbulatory Care Facilitieslaw.inventionUrogynecologyStudy ProtocolLabor and DeliveryRandomized controlled trialQuality of lifelawMedicine and Health SciencesOutpatient clinicRegistriesMultidisciplinaryQRObstetrics and Gynecologymedicine.anatomical_structureVaginaMedicineMuscle Contractionmedicine.medical_specialtyDrug Research and DevelopmentUrologyScienceSurgical and Invasive Medical ProceduresResearch and Analysis MethodsPelvic Floor MuscleIntervention (counseling)medicineClinical TrialsOutpatient ClinicsPharmacologyIncontinencebusiness.industryBiology and Life SciencesPelvic FloorRandomized Controlled TrialsHealth CareHealth Care FacilitiesPhysical therapyQuality of LifeBirthWomen's HealthSelf ReportClinical MedicineSexual functionbusinessPLoS ONE
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Vizuālās identitātes izstrāde rotu dizaineriem

2017

Aivas Krasovskas diplomdarba tēma ir "Vizuālās identitātes izstrāde rotu dizaineriem". Darba teorētiskās daļas pirmajā nodaļā autore sniedz nelielu ieskatu rotu izcelsmes un attīstības vēsturē Latvijā un citviet Eiropā. Kā arī apraksta rotu veidus un to pielietojamību vizuālā tēla individualitātes izcelšanā. Teorētiskās daļas otrajā nodaļā autore raksta par vizuālās identitātes jēdzienu, tā nozīmi un veidošanas galvenajiem elementiem, kurus svarīgi ņemt vērā, izstrādājot rotu dizaineru vizuālo identitāti. Autore padziļināti apraksta literatūras izpētes procesā iegūtās zināšanas par atpazīstamības zīmju kategoriju iedalījumu – logo, vārdzīme, simbols, to veidiem, izcelsmi un atšķirībām starp…

Mākslas zinātneZīmolsVizuālā identitāteAtpazīstamības zīmeRotaslietasRotu dizains
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