Search results for "TRANSFER"

Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

β-Amyrin Synthase1 Controls the Accumulation of the Major Saponins Present in Pea (Pisum sativum)

2021

Abstract The use of pulses as ingredients for the production of food products rich in plant proteins is increasing. However, protein fractions prepared from pea or other pulses contain significant amounts of saponins, glycosylated triterpenes that can impart an undesirable bitter taste when used as an ingredient in foodstuffs. In this article, we describe the identification and characterization of a gene involved in saponin biosynthesis during pea seed development, by screening mutants obtained from two Pisum sativum TILLING (Targeting Induced Local Lesions IN Genomes) populations in two different genetic backgrounds. The mutations studied are located in a gene designated PsBAS1 (β-amyrin s…

Combining spatial prioritization and expert knowledge facilitates effectiveness of large-scale mire protection process in Finland

2019

Conservation resource allocation involves a complex set of considerations including species, habitats, connectivity, local to global biodiversity objectives, alternative protection and restoration actions, while requiring cost-efficiency and effective implementation. We present a national scale spatial conservation prioritization analysis for complementing the network of protected mires in Finland. We show how spatial prioritization coupled with regional targets and expert knowledge can facilitate structured decision-making. In our application, discussion between experts was structured around the prioritization model enabling integration of quantitative analysis with expert knowledge. The u…

2020

Abstract Lichens are valuable models in symbiosis research and promising sources of biosynthetic genes for biotechnological applications. Most lichenized fungi grow slowly, resist aposymbiotic cultivation, and are poor candidates for experimentation. Obtaining contiguous, high-quality genomes for such symbiotic communities is technically challenging. Here, we present the first assembly of a lichen holo-genome from metagenomic whole-genome shotgun data comprising both PacBio long reads and Illumina short reads. The nuclear genomes of the two primary components of the lichen symbiosis—the fungus Umbilicaria pustulata (33 Mb) and the green alga Trebouxia sp. (53 Mb)—were assembled at contiguit…

Pedotransfer functions for estimating soil water retention curve of Sicilian soils

2019

Pedotransfer functions (PTFs) make use of routinely surveyed soil data to estimate soil properties but their application to soils different from those used for their development can yield inaccurate estimates. This investigation aimed at evaluating the water retention prediction accuracy of eight existing PTFs using a database of 217 Sicilian soils exploring 11 USDA textural classes. PTFs performance was assessed by root mean square differences (RMSD) and average differences (AD) between estimated and measured data. Extended Nonlinear Regression (ENR) technique was adopted to recalibrate or develop four new PTFs and Wind’s evaporation method was applied to validate the effectiveness of the …

Arabidopsis thaliana nicotianamine synthase 4 is required for proper response to iron deficiency and to cadmium exposure.

2013

International audience; The nicotianamine synthase (NAS) enzymes catalyze the formation of nicotianamine (NA), a non-proteinogenic amino acid involved in iron homeostasis. We undertook the functional characterization of AtNAS4, the fourth member of the Arabidopsis thaliana NAS gene family. A mutant carrying a T-DNA insertion in AtNAS4 (atnas4), as well as lines overexpressing AtNAS4 both in the atnas4 and the wild-type genetic backgrounds, were used to decipher the role of AtNAS4 in NA synthesis, iron homeostasis and the plant response to iron deficiency or cadmium supply. We showed that AtNAS4 is an important source for NA. Whereas atnas4 had normal growth in iron-sufficient medium, it dis…

Variations in soil-water use by grapevine according to plant water status and soil physical-chemical characteristics - A 3D spatio-temporal analysis.

2016

14 pages; International audience; Understanding plant and soil-water relationships is crucial to optimise agricultural management. In this multidisciplinary work, soil geophysics and plant physiological measurements are coupled and a statistical method is proposed to visualising plant soil-water uptake in space and time. The method is applied in a vineyard context and shows differences in the use of tranpirable soil water by grapevine according to the type of soil and the time of the day (day/night).During two years the water stress experienced by a single Chardonnay/SO4 grapevine clone was monitored both at pre-dawn and midday by leaf water potentials in two field plots exclusively differe…

Evolutionary Changes after Translational Challenges Imposed by Horizontal Gene Transfer

2019

International audience; Genes acquired by horizontal gene transfer (HGT) may provide the recipient organism with potentially new functions, but proper expression level and integration of the transferred genes in the novel environment are not granted. Notably, transferred genes can differ from the receiving genome in codon usage preferences, leading to impaired translation and reduced functionality. Here, we characterize the genomic and proteomic changes undergone during experimental evolution of Escherichia coli after HGT of three synonymous versions, presenting very different codon usage preference, of an antibiotic resistance gene. The experimental evolution was conducted with and without…

Can phthalates move into the eggs of the loggerhead sea turtle Caretta caretta? The case of the nests on the Linosa Island in the Mediterranean Sea

2021

During the monitoring of Caretta caretta nests on the island of Linosa, 30 unhatched eggs from four nests were collected to study the presence of phthalates in their three components (shell, yolk, and albumen). Four phthalates, namely diethyl (DEP), dibutyl (DBP), di-(2-ethylhexyl) (DEHP), and dioctyl (DOTP) phthalic acid esters (PAE), which are widely used as additives in plastics, were detected in all egg components. The most frequently found phthalate was DBP, followed by DEHP in eggshell and yolk. Dimethyl- (DMP) and butylbenzyl-phthalate (BBP) were below the limits of detection for all samples. The high total phthalate recorded in the yolk suggests that contamination could arise by vit…

Carbon partitioning in a walnut-maize agroforestry system through arbuscular mycorrhizal fungi

2020

National audience; In tree-based intercropping systems, roots of trees and crops are interacting and could influence ecosystem services provided by soil microorganisms. Here, the analysis of diversity of arbuscular mycorrhiza fungi (AMF) associated with roots of walnut and maize reveals differences. Of interest, Funneliformis genus is mainly associated with maize roots, and one OTU related to an uncultured Glomus, might form a common mycorrhizal network linking roots of both plants. In addition, the analysis of 13C of mycelium living in the surrounding environment of roots, suggest that part of the carbon derived from walnut trees could be transferred to maize plants. Our results suggest th…