Search results for "TYR"

showing 10 items of 2017 documents

Protonation of Tyrosine Kinase Inhibitor Lapatinib: A Theoretical and Experimental Study

2019

The protonation process of tyrosine kinase inhibitor lapatinib was studied by means of 1HNMR and UV/Vis spectroscopy joint with the theoretical calculations at DFT and semi-empirical levels. DFT/M06-2X geometries were used to describe and compare the different cationic forms of lapatinib, while ZINDO/S-CI method performed on those geometries allowed for the interpretation of experimental UV/Vis spectra of lapatinib at various pH. We found that at low pH two different dicationic forms (N2N1 and N1N3) of lapatinib were present in ethanol and DMSO-d6 solutions. The first protonation, however, occurred on the aliphatic N1 in DMSO-d6, while in ethanol solutions most probably the quinazoline nitr…

010405 organic chemistryChemistryStereochemistrymedicine.drug_classMechanical EngineeringProtonationNuclear magnetic resonance spectroscopy010402 general chemistryLapatinib01 natural sciencesTyrosine-kinase inhibitor0104 chemical sciencesUltraviolet visible spectroscopyMechanics of MaterialsmedicineGeneral Materials Sciencemedicine.drugKey Engineering Materials
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Hierarchical Beta zeolites as catalysts in a one-pot three-component cascade Prins–Friedel–Crafts reaction

2020

Hierarchical Beta zeolites obtained from concentrated reaction mixtures (H2O/Si = 2.5–7.0) in the presence of CTAB and their conventional and nanosponge analogues were investigated in a one-pot cascade environmentally friendly Prins–Friedel–Crafts reaction of butyraldehyde with 3-buten-1-ol and anisole under mild conditions (60 °C). The highest yields of the desired products with 4-aryltetrahydropyran structure were achieved when using hierarchical zeolites characterised by well-developed mesoporosity (facilitating the formation of bulky intermediates and products) and by an increased fraction of highly accessible (evaluated by TTBPy method) medium-strength Bronsted acid sites. Acid sites w…

010405 organic chemistryEther010402 general chemistryAnisole01 natural sciencesPollutionEnvironmentally friendly0104 chemical sciencesCatalysis[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistrychemistry.chemical_compoundAdsorptionchemistryEnvironmental ChemistryOrganic chemistryButyraldehydeBrønsted–Lowry acid–base theoryFriedel–Crafts reactionComputingMilieux_MISCELLANEOUSGreen Chemistry
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An Integrated Multiscale Method for the Characterisation of Active Faults in Offshore Areas. The Case of Sant’Eufemia Gulf (Offshore Calabria, Italy)

2021

Diagnostic morphological features (e.g., rectilinear seafloor scarps) and lateral offsets of the Upper Quaternary deposits are used to infer active faults in offshore areas. Although they deform a significant seafloor region, the active faults are not necessarily capable of producing large earthquakes as they correspond to shallow structures formed in response to local stresses. We present a multiscale approach to reconstruct the structural pattern in offshore areas and distinguish between shallow, non-seismogenic, active faults, and deep blind faults, potentially associated with large seismic moment release. The approach is based on the interpretation of marine seismic reflection data and …

010504 meteorology & atmospheric sciencesSettore GEO/02 - Geologia Stratigrafica E SedimentologicaScienceSettore GEO/03 - Geologia StrutturaleInversion (geology)Active faultSlab-tear faultLate MioceneCalabrian arc (Italy)010502 geochemistry & geophysicsFault scarp01 natural sciencesPaleontologymorphotectonic analysiMorphotectonic analysisHigh-resolution seismic dataBathymetry0105 earth and related environmental sciencesActive tectonicsactive tectonicQAnticlineSeafloor spreadingTectonicsGeneral Earth and Planetary SciencesGeologySouthern tyrrhenian sea
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Micropropagation of Sicilian cultivars with an aim to preserve genetic diversity in hazelnut (Corylus avellana L.)

2018

The use of a small number of cultivars in agriculture can lead to a loss of agrobiodiversity. Since in vitro techniques are valuable tools for conserving plant biodiversity, an efficient micropropagation protocol for four Italian hazelnut cultivars, ‘Carrello’, ‘Ghirara’, ‘Minnulara’, and ‘Panottara’, was developed. The highest axillary bud survival was obtained after decontamination with 40 min 1% sodium hypochlorite followed by 40 min 0.1% sodium merthiolate in ‘Minnulara’ and ‘Ghirara’, while the 35þ35 min treatment was the best for ‘Carrello’ and ‘Panottara’. Shoot multiplication was higher in ‘Minnulara’ and ‘Ghirara’ when 6.6 lM N6-benzyladenine was used, even if some hyperhydric shoo…

0106 biological sciences0301 basic medicineBiodiversityindole-3-butyric acidPlant ScienceBiology01 natural sciences03 medical and health scienceschemistry.chemical_compoundCultivarN6-benzyladenineEcology Evolution Behavior and SystematicsDecontamination timeGenetic diversityshoot multiplicationbusiness.industryIndole-3-butyric acidlanguage.human_languageSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeHorticulture030104 developmental biologyMicropropagationchemistryrooting inductionAgriculturemetatopolinlanguageAgricultural biodiversitybusinessSicilian010606 plant biology & botanyPlant Biosystems - An International Journal Dealing with all Aspects of Plant Biology
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Changes in freshwater sediment microbial populations during fermentation of crude glycerol

2020

This work was supported by the Latvian Council of Science , project NN-CARMA, project No. lzp-2018/1-0194.

0106 biological sciences0301 basic medicineFirmicutesMicroorganismlcsh:BiotechnologyMicroorganismsFirmicutes01 natural sciencesApplied Microbiology and BiotechnologyActinobacteriaButyric acid03 medical and health scienceschemistry.chemical_compound010608 biotechnologylcsh:TP248.13-248.65:NATURAL SCIENCES:Physics [Research Subject Categories]GlycerolFood sciencelcsh:QH301-705.5ClostridiumCrude glycerolbiologyFreshwater sediment microbial populations fermentationbiology.organism_classification6. Clean waterActinobacteriaqPCR030104 developmental biologychemistryMicrobial population biologylcsh:Biology (General)Biodiesel productionFermentationAnaerobic fermentationGammaproteobacteriaBiotechnologyElectronic Journal of Biotechnology
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Isolation of acetic, propionic and butyric acid-forming bacteria from biogas plants.

2015

In this study, acetic, propionic and butyric acid-forming bacteria were isolated from thermophilic and mesophilic biogas plants (BGP) located in Germany. The fermenters were fed with maize silage and cattle or swine manure. Furthermore, pressurized laboratory fermenters digesting maize silage were sampled. Enrichment cultures for the isolation of acid-forming bacteria were grown in minimal medium supplemented with one of the following carbon sources: Na(+)-dl-lactate, succinate, ethanol, glycerol, glucose or a mixture of amino acids. These substrates could be converted by the isolates to acetic, propionic or butyric acid. In total, 49 isolates were obtained, which belonged to the phyla Firm…

0106 biological sciences0301 basic medicineFirmicutesSilageSwineClostridium cochleariumMolecular Sequence DataBioengineeringBacillusReal-Time Polymerase Chain Reaction01 natural sciencesApplied Microbiology and BiotechnologyDNA RibosomalZea maysMicrobiologyButyric acid03 medical and health sciencesAcetic acidchemistry.chemical_compoundBioreactors010608 biotechnologyRNA Ribosomal 16SAnimalsThermoanaerobacterium thermosaccharolyticumPhylogenyAcetic AcidDNA PrimersClostridiumSilagebiologyBacteriaBase SequenceGeneral Medicinebiology.organism_classificationLactic acidManure030104 developmental biologychemistryBiofuelsFermentationButyric AcidCattlePropionatesBacteriaGenome BacterialBiotechnologyJournal of biotechnology
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Neotropical primate evolution and phylogenetic reconstruction using chromosomal data

2017

Platyrrhini are a group of Neotropical primates living in central and south America, and have been extensively studied through morphological and molecular data in order to shed light on their phylogeny and evolution. Agreement on the main clades of Neotropical primates has been reached using different approaches, but many phylogenetic nodes remain under discussion. Contrasting hypotheses have been proposed, presumably due to different markers and the presence of polymorphisms in the features considered; furthermore, neither Neotropical primate biodiversity nor their taxonomy are entirely known. In our perspective, a cytogenetic approach can help by making an important contribution to the ev…

0106 biological sciences0301 basic medicineZoologyPlatyrrhiniSettore BIO/08 - Antropologia010603 evolutionary biology01 natural sciencesGenomehuman associationsMolecular cytogenetics03 medical and health sciencesNeotropical monkeys molecular cytogenetics painting human associations genomePhylogeneticsbiology.animallcsh:ZoologyPrimatelcsh:QL1-991CladegenomePhylogenetic treebiologypaintingNeotropical monkeys030104 developmental biologyEvolutionary biologyAnimal Science and ZoologyTaxonomy (biology)molecular cytogeneticsThe European Zoological Journal
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The Glycerate and Phosphorylated Pathways of Serine Synthesis in Plants : The Branches of Plant Glycolysis Linking Carbon and Nitrogen Metabolism

2018

Serine metabolism in plants has been studied mostly in relation to photorespiration where serine is formed from two molecules of glycine. However, two other pathways of serine formation operate in plants and represent the branches of glycolysis diverging at the level of 3-phosphoglyceric acid. One branch (the glycerate – serine pathway) is initiated in the cytosol and involves glycerate formation from 3-phosphoglycerate, while the other (the phosphorylated serine pathway) operates in plastids and forms phosphohydroxypyruvate as an intermediate. Serine formed in these pathways becomes a precursor of glycine, formate and glycolate accumulating in stress conditions. The pathways can be linked …

0106 biological sciences0301 basic medicineycolysisReviewPlant Sciencelcsh:Plant culture01 natural sciencesSerine03 medical and health scienceslcsh:SB1-1110GlycolysisPlastidplastidNitrogen cycleglycerate serine pathwayγ-aminobutyric acid (GABA)gamma-aminobutyric acid (GABA)ChemistryBotanyCorrectionMetabolismBotanikglycolysisphosphorylated serine pathway030104 developmental biologyBiochemistryGlycinePhotorespirationPhosphorylation010606 plant biology & botany
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Biotrickling filter modeling for styrene abatement. Part 1: Model development, calibration and validation on an industrial scale

2017

Abstract A three-phase dynamic mathematical model based on mass balances describing the main processes in biotrickling filtration: convection, mass transfer, diffusion, and biodegradation was calibrated and validated for the simulation of an industrial styrene-degrading biotrickling filter. The model considered the key features of the industrial operation of biotrickling filters: variable conditions of loading and intermittent irrigation. These features were included in the model switching from the mathematical description of periods with and without irrigation. Model equations were based on the mass balances describing the main processes in biotrickling filtration: convection, mass transfe…

0106 biological sciencesConvectionEngineeringEnvironmental EngineeringHealth Toxicology and MutagenesiseducationBiotrickling filter010501 environmental sciencesResidence time (fluid dynamics)01 natural scienceslaw.invention:Enginyeria química::Química del medi ambient::Química atmosfèrica [Àrees temàtiques de la UPC]Filter (large eddy simulation)Bioreactorslaw010608 biotechnologyMass transferEnvironmental ChemistryGases - PurificationVolatile organic compoundDiffusion (business)FiltrationStyrene0105 earth and related environmental scienceschemistry.chemical_classificationgeographyAir PollutantsVolatile Organic Compoundsgeography.geographical_feature_categorybusiness.industryPublic Health Environmental and Occupational HealthEnvironmental engineeringGeneral MedicineGeneral ChemistryPilot unitModels TheoreticalVolatile organic compoundInletPollutionGasos - DepuracióBiodegradation EnvironmentalchemistryCalibrationMathematical modelingBiological air treatmentbusinessFiltration
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