Search results for "Tree"
showing 10 items of 1841 documents
Complete genome analysis of contemporary G12P[8] rotaviruses reveals heterogeneity within Wa-like genomic constellation
2016
G12 rotaviruses are globally emergent rotaviruses causing severe childhood gastroenteritis. Little is known about the evolution and diversity of G12P[8] rotaviruses and the possible role that widespread vaccine use, globally, has had on their emergence. In Sicily, Italy, surveillance activity for rotaviruses has been conducted uninterruptedly since 1985, thus representing a unique observatory for the study of human rotaviruses in the pre- and post-vaccine era. G12 rotaviruses were first detected only in 2012 and between 2012 and 2014 they accounted for 8.7% of all rotavirus-associated infections among children, with peaks of 27.8% in 2012/2013 and 21% in 2014. We determined and analyzed the…
Diversity and zoonotic potential of rotaviruses in swine and cattle across Europe.
2011
Group A rotaviruses can infect both humans and animals. Individual rotavirus strains can occasionally cross species barriers and might hereby contribute to the emergence of new genotypes in heterologous hosts. The incidence and impact of zoonotic rotavirus are not well defined, and one reason for this is a lack of data about strains circulating in suspected reservoir animal hosts. In this study we report the incidence, genetic diversity, and molecular epidemiology of rotaviruses detected in domestic cattle and swine in 6 European countries. From 2003 to 2007, 1101 and more than 2000 faecal specimens were collected from swine and cattle, both healthy and diarrhoeic, and tested for rotaviruse…
Are Human P[14] Rotavirus Strains the Result of Interspecies Transmissions from Sheep or Other Ungulates That Belong to the Mammalian Order Artiodact…
2009
ABSTRACT A limited number of human G6P[14] rotavirus strains that cause gastroenteritis in humans have been isolated in Europe and Australia. The complete genome sequences were determined for five of these human strains—B10925-97 (isolated in Belgium in 1997), 111/05-27 (Italy, 2005), PA169 (Italy, 1987), MG6 (Australia, 1993), and Hun5 (Hungary, 1997)—and their genetic relatedness to animal rotavirus strains was evaluated by sequencing the complete genome of the sheep rotavirus OVR762 (G8P[14]; Spain, 2002), the guanaco ( Lama guanicoe ) rotavirus strains Arg/Chubut/99 and Arg/Río Negro/98 (G8P[14] and G8P[1], respectively; Argentina, 1999 and 1998), the sable antelope strain RC-18/08 (G6…
Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population.
2006
ABSTRACT A rotavirus sample collection from 19 consecutive years was used to investigate the heterogeneity and the dynamics of evolution of G1 rotavirus strains in a geographically defined population. Phylogenetic analysis of the VP7 gene sequences of G1P[8] human rotavirus strains showed the circulation of a heterogeneous population comprising three lineages and seven sublineages. Increases in the circulation of G1 rotaviruses were apparently associated with the introduction of novel G1 strains that exhibited multiple amino acid changes in antigenic regions involved in rotavirus neutralization compared to the strains circulating in the previous years. The emergence and/or introduction of G…
Emergence in 2017-2019 of novel reassortant equine-like G3 rotavirus strains in Palermo, Sicily.
2021
Rotavirus A (RVA) is a major etiologic agent of gastroenteritis in children worldwide. Hospital-based surveillance of viral gastroenteritis in paediatric population in Palermo (Italy) from 2017 onwards revealed a sharp increase in G3P[8] RVAs, accounting for 71% of all the RVAs detected in 2019. This pattern had not been observed before in Italy, with G3 RVA usually being detected at rates lower than 3%. In order to investigate this unique epidemiological pattern, the genetic diversity of G3 RVAs identified during a 16-year long surveillance (2004-2019) was explored by systematic sequencing of the VP7 and VP4 genes and by whole genome sequencing of selected G3 strains, representative of the…
A feline rotavirus G3P[9] carries traces of multiple reassortment events and resembles rare human G3P[9] rotaviruses.
2011
The full-length genome sequence of a feline G3P[9] rotavirus (RV) strain, BA222, identified from the intestinal content of an adult cat, was determined. Strain BA222 possessed a G3-P[9]-I2-R2-C2-M2-A3-N1-T3-E2-H3 genomic constellation, differing substantially from other feline RVs. Phylogenetic analyses of each genome segment revealed common origins with selected animal and zoonotic human RVs, notably with rare multi-reassortant human G3P[9] RVs (Ita/PAI58/96 and Ita/PAH136/96). Altogether, the findings suggest that feline RVs are genetically diverse and that human RVs may occasionally originate either directly or indirectly (via reassortment) from feline RVs.
Assignment of Roles and Channels for a Multichannel MAC in Wireless Mesh Networks
2009
International audience; A multichannel MAC improves throughput in wireless mesh networks by multiplexing transmissions over orthogonal channels. In this paper, we propose an efficient way for constructing the wireless mesh structure associated with Molecular MAC, a multichannel MAC layer designed for efficient packet forwarding. Molecular MAC outperforms other classical approaches, but requires a specific structure for efficient operation. First, we propose a centralized protocol that provides an upper bound for constructing such a molecular structure through a MILP (Mixed Integer Linear Programming) formulation that maximizes network capacity. Then, we present two distributed self-stabiliz…
QoS Multi-tree Based Routing Protocol for Inter-mesh Infrastructure Communications
2016
Part 5: Network Protocols; International audience; Quality of service (QoS) in wireless mesh networks (WMN) is an active area of research, which is driven by the increasing demand for real-time and multimedia applications, such as VoIP (Voice over IP) and VoD (Video on Demand). In this paper, we propose a QoS multi-tree based routing protocol for wireless mesh environments, named Inter-Mesh Infrastructure Proactive Routing (IMPR). It is a proactive multi-tree routing protocol enabling QoS guarantee for communications from/towards the Internet network through the Mesh Gateway (MG) of the mesh infrastructure. We describe and analyze the simulation results of different scenarios conducted on t…
SUBOPTIMAL-OPTIMAL ROUTING FOR LAN INTERNETWORKING USING TRANSPARENT BRIDGES
1998
The current standard transparent bridge protocol IEEE-802.1D is based on the Spanning Tree (ST) algorithm. It has a very important restriction: it cannot work when the topology has active loops. Therefore, a tree is the only possible interconnection topology that can be used. The ST algorithm guarantees that the active topology is a tree discarding lines that form loops. However, because of this, network bandwidth cannot be fully utilized. Moreover, trees have a very serious bottleneck near the root. This paper proposes a new transparent bridge protocol for LAN interconnection that allows active loops. Therefore, strongly connected regular topologies like tori, hypercubes, meshes, etc., as…
Sciuridae (Rodentia, Mammalia) from the Late Miocene of Venta del Moro (Cabriel Basin, Spain): biostratigraphical, phylogenetic and palaeoecological …
2016
Fossil squirrels are relatively abundant in Aragonian and Ramblian assemblages, but very scarce in the Late Turolian and Ruscinian of the Iberian Peninsula. Until now, the locality of Venta del Mor...