Search results for "Type"

showing 10 items of 10618 documents

Distribution, ecological role and symbioses of selected shrubby species in the Mediterranean Basin: a review

2020

Among the Mediterranean ecosystems, shrublands are a characteristic type of vegetation, widespread in different habitats. Owing to different factors such as the physiological, morphological, reproductive, phenological and regenerative properties, as well as the inter-intraspecific interactions, each shrubby species represents an important element within the plant community and plays a specific ecological role. In this review, attention was focused on the ecological functions and type of plant-microsymbiont interactions in respect of selected shrubby species within the Mediterranean Basin: Amelanchier ovalis, Astragalus nebrodensis, Crataegus laciniata, Lycium intricatum, Prunus spinosa and …

0106 biological sciencesMediterranean ecosystemshrublandsDistribution (economics)Plant Science010603 evolutionary biology01 natural sciencesMediterranean BasinMediterranean areaShrublandSymbiosisEcology Evolution Behavior and Systematicsgeography.geographical_feature_categoryEcologybusiness.industryEcologyinter-intraspecific interactionSettore BIO/02 - Botanica SistematicaVegetationGeographyHabitatplant associationSettore BIO/03 - Botanica Ambientale E ApplicatabusinessCharacteristic type010606 plant biology & botany
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Regulation of plant NADPH oxidase.

2007

Addendum to: Regulation of Reactive Oxygen Species Production by a 14-3-3 Protein in Elicited Tobacco Cells. T. Elmayan, J. Fromentin, C. Riondet, G. Alcaraz, J. Blein and F. Simon-Plas. Plant Cell Environ 2007; 30:722–32; International audience; The production of Reactive Oxygen Species (ROS) is one of the key events occurring during the response of plants to environmental changes, and contributing to establish adaptive signaling pathways. A plasma membrane bound NADPH oxidase enzyme has been evidenced as the ROS producing system in various plant‑microorganisms interactions. We very recently reported, that a protein of the 14‑3‑3 family was able to interact directly with the C‑terminus par…

0106 biological sciencesMembrane boundContext (language use)Plant Science01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsNADPH OXIDASEPlant defense against herbivoryREACTIVE OXYGEN SPECIES14-3-3030304 developmental biologyPROTEINE PHOSPHATASE TYPE 2Cchemistry.chemical_classification0303 health sciencesReactive oxygen speciesOxidase testNADPH oxidasebiologyTWO-HYBRIDArticle AddendumEnzymeBiochemistrychemistryREGULATIONbiology.proteinSignal transduction010606 plant biology & botanyPlant signalingbehavior
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Does trait-based joint species distribution modelling reveal the signature of competition in stream macroinvertebrate communities?

2021

1. The occupancy and abundance of species are jointly driven by local factors, such as environmental characteristics and biotic interactions, and regional‐scale factors, such as dispersal and climate. Recently, it has been shown that biotic interactions shape species occupancies and abundances beyond local extents. However, for small ectothermic animals, particularly for those occurring in freshwater environments, the importance of biotic interactions remains understudied. Species‐to‐species associations from joint species distribution models (i.e. species associations while controlling for environmental characteristics) are increasingly used to draw hypotheses of which species possibly sho…

0106 biological sciencesMetacommunitymedia_common.quotation_subjectSpecies distributionpurotfunctional feeding guildsBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Riversjoint species distribution modelsAbundance (ecology)substrate attachment modedistributionAnimalsdispersalEcosystemFinlandEcology Evolution Behavior and Systematicsmedia_commonEcology010604 marine biology & hydrobiologyinterspecific competitionvesiekosysteemitlevinneisyysInterspecific competitioneliöyhteisöt15. Life on landselkärangattomatstreamsInvertebratesEnvironmental niche modellingPhenotypeHabitat1181 Ecology evolutionary biologyBiological dispersalAnimal Science and Zoologybody sizeleviäminen
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When less means more: evolutionary and developmental hypotheses in rodent molars.

2012

10 pages; International audience; Tooth number in rodents is an example of reduction in evolution. All rodents have a toothless diastema lacking canine and most premolars present in most other mammals. Whereas some rodent lineages retained one premolar (p4), many others lost it during evolution. Recently, an 'inhibitory cascade' developmental model (IC) has been used to predict how the first molar (m1) influences the number and relative sizes of the following distal molars (m2 and m3). The model does not, however, consider the presence of premolars, and here we examine whether the premolar could influence and constrain molar proportions during development and evolution. By investigating a l…

0106 biological sciencesMolarRodentmolar proportionsRodentiapremolarBiologyMacroevolutionModels Biological010603 evolutionary biology01 natural sciencesMandibular first molar03 medical and health sciencesstomatognathic systembiology.animalevolutionPremolarmedicineAnimalsdevelopmentEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology030304 developmental biology0303 health sciencesmacroevolutionDentition[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Anatomyinhibitory cascadeBiological EvolutionMolar[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]medicine.anatomical_structureEvolutionary biologyrodentsDiastemaLinear ModelsBasal phenotype[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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A revision of the rare genusCyclolampas(Echinoidea) using morphometrics with description of a new species from the upper Callovian of Burgundy (Franc…

2013

The discovery of a new species,Cyclolampas altusnew species in the upper Callovian of Burgundy (France) leads to the systematic revision of the rare echinoid genusCyclolampasPomel, 1883. Two morphometric approaches are used jointly to describe and quantify variations in test shape: the analysis of linear measurements and the Elliptic Fourier shape analysis. Both analyses yield congruent results that highlight the amplitude of within-species variations and quantify the part due to allometry. Along with the description ofC. altus, the systematic position of species formerly assigned to the generaPygorhytisPomel, 1883 andCyclolampasis amended. Previously attributed to the genusPygorhytis,Cyclo…

0106 biological sciencesMorphometrics010506 paleontologyType speciesPaleontologyGenusPaleontologyAllometryNomen nudumBiology010603 evolutionary biology01 natural sciences0105 earth and related environmental sciencesJournal of Paleontology
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Efficient estimation of generalized linear latent variable models.

2019

Generalized linear latent variable models (GLLVM) are popular tools for modeling multivariate, correlated responses. Such data are often encountered, for instance, in ecological studies, where presence-absences, counts, or biomass of interacting species are collected from a set of sites. Until very recently, the main challenge in fitting GLLVMs has been the lack of computationally efficient estimation methods. For likelihood based estimation, several closed form approximations for the marginal likelihood of GLLVMs have been proposed, but their efficient implementations have been lacking in the literature. To fill this gap, we show in this paper how to obtain computationally convenient estim…

0106 biological sciencesMultivariate statisticsMultivariate analysisComputer scienceBinomials01 natural sciencesPolynomials010104 statistics & probabilityAmoebastilastolliset mallitestimointiProtozoansLikelihood FunctionsMultidisciplinaryApproximation MethodsStatistical ModelsSimulation and ModelingApplied MathematicsStatisticsQLinear modelREukaryotaLaplace's methodData Interpretation StatisticalPhysical SciencesVertebratesMedicineAlgorithmAlgorithmsResearch ArticleOptimizationScienceLatent variableResearch and Analysis Methods010603 evolutionary biologygeneralized linear latent variable modelsSet (abstract data type)BirdsAnimalsComputer Simulation0101 mathematicsta112OrganismsBiology and Life SciencesStatistical modelMarginal likelihoodAlgebraAmniotesMultivariate AnalysisLinear ModelsMathematicsSoftwarePLoS ONE
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Adaptation of turnip mosaic potyvirus to a specific niche reduces its genetic and environmental robustness

2020

Robustness is the preservation of the phenotype in the face of genetic and environmental perturbations. It has been argued that robustness must be an essential fitness component of RNA viruses owed to their small and compacted genomes, high mutation rates and living in ever-changing environmental conditions. Given that genetic robustness might hamper possible beneficial mutations, it has been suggested that genetic robustness can only evolve as a side-effect of the evolution of robustness mechanisms specific to cope with environmental perturbations, a theory known as plastogenetic congruence. However, empirical evidences from different viral systems are contradictory. To test how adaptation…

0106 biological sciencesMutation rateNicherobustness010603 evolutionary biology01 natural sciencesMicrobiologyGenome03 medical and health sciencesplant virusVirologythermal fluctuationsAcademicSubjects/MED00860experimental evolutionplastogenetic congruence030304 developmental biologyvirus evolution0303 health sciencesExperimental evolutionbiologyAcademicSubjects/SCI01130AcademicSubjects/SCI02285PotyvirusRobustness (evolution)biology.organism_classificationPhenotypeEvolutionary biologyViral evolutionmutagenesisResearch Article
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A minimalist macroparasite diversity in the round goby of the Upper Rhine reduced to an exotic acanthocephalan lineage.

2018

AbstractThe round goby, Neogobius melanostomus, is a Ponto-Caspian fish considered as an invasive species in a wide range of aquatic ecosystems. To understand the role that parasites may play in its successful invasion across Western Europe, we investigated the parasitic diversity of the round goby along its invasion corridor, from the Danube to the Upper Rhine rivers, using data from literature and a molecular barcoding approach, respectively. Among 1666 parasites extracted from 179 gobies of the Upper Rhine, all of the 248 parasites barcoded on the c oxidase subunit I gene were identified as Pomphorhynchus laevis. This lack of macroparasite diversity was interpreted as a loss of parasites…

0106 biological sciencesNeogobiusRange (biology)Lineage (evolution)Zoology010603 evolutionary biology01 natural sciencesNucleotide diversityAcanthocephalaPomphorhynchus laevisinvasive speciesElectron Transport Complex IVNeogobius melanostomusRhine–Main–Danube corridorRiversAnimalsDNA Barcoding Taxonomic[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology14. Life underwaterEurope EasternPhylogenyGenetic diversitybiology010604 marine biology & hydrobiologyGenetic VariationHigh-Throughput Nucleotide SequencingBiodiversitybiology.organism_classificationPerciformesInfectious DiseasesHaplotypesRound gobyMacroparasiteAnimal Science and ZoologyParasitologyPomphorhynchus laevisFranceHelminthiasis AnimalIntroduced SpeciesExotic parasite
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Solving the Puzzle of Taxonomic Position of the Petroleum Fly by Resurrection of Diasemocera Bezzi from Psilopa Fallén (Diptera: Ephydridae) with Pro…

2018

Diasemocera Bezzi, 1895 (Type species: Psilopa nigrotaeniata Bezzi, 1895 [= Psilopa roederi Girschner, 1889]) is resurrected from synonymy with Psilopa and the following four new synonyms of Diasemocera are proposed: Domina Hutton (Type species: Domina metallica Hutton), Discocerinella Mercier (Type species: Discocerinella omonvillea Mercier, 1927 [= Notiphila pulicaria Haliday, 1839]), Trimerinoides Cresson (Type species: Trimerina adfinis Cresson) and Helaeomyia Cresson, 1941 (Type species: Psilopa petrolei Coquillett). Diasemocera is placed close to the genus Trimerina and it differs from the highly specialized Psilopa and related genera by the number of pseudotracheae (6–7), vestiture o…

0106 biological sciencesNigritellabiology010607 zoologynew combinationsEphydridaebiology.organism_classification010603 evolutionary biology01 natural sciencesnew synonymsType speciesHelaeomyia petroleiPsilopaGenusDiscomyzinaeBotanyTrimerinoides adfinisDiscomyzinaeKey (lock)Ecology Evolution Behavior and SystematicsAnnales Zoologici
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DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana : extensive nonsynonymous variation is consistent with local selection for flowering time

2002

FRIGIDA (FRI) is a major gene involved in the regulation of flowering time in Arabidopsis thaliana. Nucleotide variation at this gene was investigated by sequencing 25 field ecotypes collected from western Europe. Genetic diversity at FRI was characterized by a high number of haplotypes and an excess of low-frequency polymorphisms. A large excess of intraspecific nonsynonymous variation associated with low synonymous variation was detected along the first exon in the FRI gene. In contrast, no excess of nonsynonymous divergence was detected between A. thaliana and A. lyrata. The Tajima and McDonald and Kreitman tests, however, suggested that this gene has evolved in a nonneutral fashion. Non…

0106 biological sciencesNonsynonymous substitutionArabidopsisFlowers01 natural sciences03 medical and health sciencesExonGenetics[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyArabidopsis thaliana[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsRecombination Genetic0303 health sciencesGenetic diversityPolymorphism GeneticbiologyEcotypeArabidopsis ProteinsHaplotypeGenetic VariationSequence Analysis DNAbiology.organism_classificationMajor genePhenotype010606 plant biology & botany
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