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showing 10 items of 10618 documents

Inter- and intraspecific hypervariability in interstitial telomeric-like repeats (TTTAGGG)n in Anacyclus (Asteraceae).

2017

BACKGROUND AND AIMS: Interstitial telomeric repeat (ITR) sites, consisting of tandem repeats of telomeric motifs localized at intrachromosomal sites, have been reported in a few unrelated organisms including plants. However, the causes for the occurrence of ITRs outside of the chromosomal termini are not fully understood. One possible explanation are the chromosomal rearrangements involving telomeric sites, which could also affect the location of other structural genome elements, such as the 45S rDNA. Taking advantage of the high dynamism in 45S rDNA loci previously found in Anacyclus (Asteraceae, Anthemideae), the occurrence and patterns of variation of ITRs were explored in this genus wit…

0106 biological sciences0301 basic medicineDNA PlantKaryotypeChromosomal translocationPlant ScienceAsteraceae01 natural sciencesGenomeDNA Ribosomal03 medical and health sciencesTandem repeatAnthemideaeHomologous chromosomemedicineNucleotide MotifsAnacyclusPolymorphism Geneticbiologymedicine.diagnostic_testChromosomeGenetic VariationOriginal ArticlesTelomerebiology.organism_classification030104 developmental biologyGenetics PopulationEvolutionary biologyGenetic LociRNA RibosomalTandem Repeat Sequences010606 plant biology & botanyFluorescence in situ hybridizationAnnals of botany
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Chaenothecopsis schefflerae (Ascomycota: Mycocaliciales): a widespread fungus on semi-hardened exudates of endemic New Zealand Araliaceae

2017

Ascomycetes specialised to live on hardened plant exudates occur worldwide, but the number of species so far described is relatively small (c.30). Particularly within the genus Chaenothecopsis (Ascomycota:Mycocaliciales), many species produce their ascomata on hardened but still relatively fresh outpourings of conifer resin or angiosperm exudate. Temperate rainforests of New Zealand provide habitat for several endemic Chaenothecopsis species, including Chaenothecopsis schefflerae, which was previously known from a single sample collected from the exudate of Schefflera digitata (Araliaceae) in the early 1980s. Here we show that C.schefflerae is neither lost nor very rare, but occurs sporadic…

0106 biological sciences0301 basic medicineExudateRIBOSOMAL DNA-SEQUENCESPHYLOGENYkotelosienetMODELSUusi-SeelantiPlant SciencePseudopanax010603 evolutionary biology01 natural sciences03 medical and health sciencesresinicolous fungiNOV.GenusBotanymedicine1183 Plant biology microbiology virologyEcology Evolution Behavior and SystematicsIDENTIFICATIONbiologyMycocaliciumHUMBOLDTENSISexudate15. Life on land030108 mycology & parasitologybiology.organism_classificationPseudopanaxScheffleraScheffleraNEW-CALEDONIAAscocarp1181 Ecology evolutionary biologySchefflera digitatata1181AraliaceaeType specimenmedicine.symptomNew ZealandNew Zealand Journal of Botany
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Recent advancements in lactic acid production - a review.

2017

Abstract Lactic acid, as an organic acid, has essential roles in industrial applications ranging from the food industry to life-sciences. Conventional fermentation methods have been well-studied since late 18th century, but are unable to achieve consumers' expectations regarding both quality and quantity. Therefore, novel technological developments of lactic acid production to increase yield and decrease over-all cost have become the primary goal. Genetic and metabolic engineering are great tools to overcome problems associated with product inhibition, undesired by-product formation, the negative effect of extreme culture conditions and most importantly inefficient use of expensive substrat…

0106 biological sciences0301 basic medicineFood industryGenotype01 natural sciencesMetabolic engineering03 medical and health scienceschemistry.chemical_compoundIndustrial MicrobiologyBioreactors010608 biotechnologyProduction (economics)Lactic AcidProductivitychemistry.chemical_classificationBacteriabusiness.industryEquipment DesignLactic acid030104 developmental biologyPhenotypechemistryFermentationFermentationBiochemical engineeringbusinessGenetic EngineeringFood ScienceOrganic acidFood research international (Ottawa, Ont.)
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Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos.

2017

WOS: 000397335400001

0106 biological sciences0301 basic medicineGene FlowGenotypeLocal adaptationPopulationGenes MHC Class II010603 evolutionary biology01 natural sciencesIntraspecific competitionGene flowMHC GenesBirds03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[ SDV.IMM ] Life Sciences [q-bio]/Immunology14. Life underwaterSelection GeneticeducationEcology Evolution Behavior and SystematicsAllelic diversity ; Local adaptation ; MHC genes ; Pathogen-mediated balancing selection ; Greater flamingosAllelesLocal adaptationeducation.field_of_studyGenetic diversitybiologyHistocompatibility Antigens Class IIGenetic VariationAllelic diversityMHC genesExonsbiology.organism_classificationPathogen-mediated balancing selection030104 developmental biologyEvolutionary biologyGreater flamingosBiological dispersal[SDV.IMM]Life Sciences [q-bio]/ImmunologyGreater flamingoAdaptation[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisResearch Article
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Local adaptation of plant viruses: lessons from experimental evolution.

2016

[EN] For multihost pathogens, adaptation to multiple hosts has important implications for both applied and basic research. At the applied level, it is one of the main factors determining the probability and severity of emerging disease outbreaks. At the basic level, it is thought to be a key mechanism for the maintenance of genetic diversity both in host and pathogen species. In recent years, a number of evolution experiments have assessed the fate of plant virus populations replicating within and adapting to one single or to multiple hosts species. A first group of these experiments tackled the existence of trade-offs in fitness and virulence for viruses evolving either within a single hos…

0106 biological sciences0301 basic medicineGeneralistsGenotypeLocal adaptationAcclimatizationGenetic FitnessBiology010603 evolutionary biology01 natural sciencesHost SpecificityPlant VirusesEvolution Molecular03 medical and health sciencesPathosystemGeneticsGenetic PleiotropyEcology Evolution Behavior and SystematicsLocal adaptationGenetic diversityExperimental evolutionVirulenceGenetic VariationGenetic PleiotropyVirus evolutionSpecialists030104 developmental biologyExperimental evolutionEvolutionary biologyViral evolutionHost rangeAntagonistic pleiotropyGenetic FitnessAdaptationMolecular ecology
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C 3 –C 4 intermediates may be of hybrid origin – a reminder

2017

Summary The currently favoured model of the evolution of C4 photosynthesis relies heavily on the interpretation of the broad phenotypic range of naturally growing C3–C4 intermediates as proxies for evolutionary intermediate steps. On the other hand, C3–C4 intermediates had earlier been interpreted as hybrids or hybrid derivates. By first comparing experimentally generated with naturally growing C3–C4 intermediates, and second summarising either direct or circumstantial evidence for hybridisation in lineages comprising C3, C4 and C3–C4 intermediates, we conclude that a possible hybrid origin of C3–C4 intermediates deserves careful examination. While we acknowledge that the current model of C…

0106 biological sciences0301 basic medicineGeneticsPhysiologyIntermediate phenotypePlant ScienceBiology01 natural sciences03 medical and health sciencesMoricandia arvensis030104 developmental biologyPhylogenetics010606 plant biology & botanyHybridNew Phytologist
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2021

Most species are either parasites or exploited by parasites, making parasite–host interactions a driver of evolution. Parasites with complex life cycles often evolve strategies to facilitate transmission to the definitive host by manipulating their intermediate host. Such manipulations could explain phenotypic changes in the ant Temnothorax nylanderi, the intermediate host of the cestode Anomotaenia brevis. In addition to behavioral and morphological alterations, infected workers exhibit prolonged lifespans, comparable to that of queens, which live up to two decades. We used transcriptomic data from cestodes and ants of different castes and infection status to investigate the molecular unde…

0106 biological sciences0301 basic medicineGeneticsTemnothorax nylanderiHost (biology)ved/biologymedia_common.quotation_subjectved/biology.organism_classification_rank.speciesIntermediate hostLongevityBiology010603 evolutionary biology01 natural sciencesPhenotypeTranscriptome03 medical and health sciences030104 developmental biologyImmunityGeneticsGeneGenetics (clinical)media_commonGenes
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Application of high resolution melting assay (HRM) to study temperature-dependent intraspecific competition in a pathogenic bacterium

2017

AbstractStudies on species’ responses to climate change have focused largely on the direct effect of abiotic factors and in particular temperature, neglecting the effects of biotic interactions in determining the outcome of climate change projections. Many microbes rely on strong interference competition; hence the fitness of many pathogenic bacteria could be a function of both their growth properties and intraspecific competition. However, due to technical challenges in distinguishing and tracking individual strains, experimental evidence on intraspecific competition has been limited so far. Here, we developed a robust application of the high-resolution melting (HRM) assay to study head-to…

0106 biological sciences0301 basic medicineGenotypeClimate ChangeScienceintraspecific competitionmedia_common.quotation_subject030106 microbiologyZoologymedicine.disease_causeFlavobacterium010603 evolutionary biology01 natural sciencesArticleCompetition (biology)Intraspecific competitionHigh Resolution Melt03 medical and health sciencesmedicineAnimalsmedia_commonAbiotic componentMultidisciplinarybiologyStrain (chemistry)EcologyQFishesTemperatureRpathogenic bacteriaPathogenic bacteriabiology.organism_classificationhigh-resolution melting (HRM) assay13. Climate actionFlavobacterium columnareMedicinelämpötilaGenetic FitnessBacteriaScientific Reports
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Host infection history modifies co-infection success of multiple parasite genotypes.

2015

Co-infections by multiple parasite genotypes are common and have important implications for host-parasite ecology and evolution through within-host interactions. Typically, these infections take place sequentially, and therefore, the outcome of co-infection may be shaped by host immune responses triggered by previous infections. For example, in vertebrates, specific immune responses play a central role in protection against disease over the course of life, but co-infection research has mostly focused on previously uninfected individuals. Here, we investigated whether sequential exposure and activation of host resistance in rainbow trout Oncorhynchus mykiss affects infection success and inte…

0106 biological sciences0301 basic medicineGenotypeDiseaseTrematode Infections010603 evolutionary biology01 natural sciencesHost-Parasite Interactions03 medical and health sciencesFish DiseasesImmune systembiology.animalParasite hostingAnimalsEcology Evolution Behavior and SystematicsGeneticsbiologyHost (biology)CoinfectionVertebrateAcquired immune system030104 developmental biologyOncorhynchus mykissImmunologyFacilitationAnimal Science and ZoologyEvolutionary ecologyTrematodaThe Journal of animal ecology
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Repeated evolution of camouflage in speciose desert rodents

2017

AbstractThere are two main factors explaining variation among species and the evolution of characters along phylogeny: adaptive change, including phenotypic and genetic responses to selective pressures, and phylogenetic inertia, or the resemblance between species due to shared phylogenetic history. Phenotype-habitat colour match, a classic Darwinian example of the evolution of camouflage (crypsis), offers the opportunity to test the importance of historical versus ecological mechanisms in shaping phenotypes among phylogenetically closely related taxa. To assess it, we investigated fur (phenotypic data) and habitat (remote sensing data) colourations, along with phylogenetic information, in t…

0106 biological sciences0301 basic medicineGenotypeScienceevoluutioZoologyColorBiology010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesPhylogeneticscamouflageAnimalsAnimal FurEcosystemPhylogenyPhylogenetic inertiaMultidisciplinaryPhylogenetic treeBiological MimicryQRspeciose desert rodents15. Life on landbiology.organism_classificationGerbillusBiological Evolution030104 developmental biologyTaxonPhenotypeHabitatCamouflageCrypsisMedicineGerbillinae
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