Search results for "Underwater"

showing 10 items of 1058 documents

Machine learning predictions of trophic status indicators and plankton dynamic in coastal lagoons

2018

Abstract Multivariate trophic indices provide an efficient way to assess and classify the eutrophication level and ecological status of a given water body, but their computation requires the availability of experimental information on many parameters, including biological data, that might not always be available. Here we show that machine learning techniques – once trained against a full data set – can be used to infer plankton biomass information from chemical and physical parameter only, so that trophic index can then be computed without using additional biological data. More specifically, we reconstruct plankton information from chemical and physical data, and this information together w…

0106 biological sciencesGeneral Decision Sciences010501 environmental sciencesMachine learningcomputer.software_genre01 natural sciencesZooplanktonPhytoplankton14. Life underwaterEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesTrophic levelBiological dataEcologybusiness.industry010604 marine biology & hydrobiologyPlanktonEcological indicator[SDE]Environmental SciencesEnvironmental scienceArtificial intelligenceTrixbusinessEutrophicationcomputer
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Distance decay 2.0 – a global synthesis of taxonomic and functional turnover in ecological communities

2021

AbstractUnderstanding the variation in community composition and species abundances, i.e., β-diversity, is at the heart of community ecology. A common approach to examine β-diversity is to evaluate directional turnover in community composition by measuring the decay in the similarity among pairs of communities along spatial or environmental distances. We provide the first global synthesis of taxonomic and functional distance decay along spatial and environmental distance by analysing 149 datasets comprising different types of organisms and environments. We modelled an exponential distance decay for each dataset using generalized linear models and extracted r2 and slope to analyse the streng…

0106 biological sciencesGeneralized linear modelDistance decayCommunity010604 marine biology & hydrobiology15. Life on land010603 evolutionary biology01 natural sciencesLatitudeExponential functionSimilarity (network science)Environmental scienceMarine ecosystem14. Life underwaterPhysical geographySpatial extent
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Driving factors of dinoflagellate cyst distribution in surface sediments of aMediterranean lagoon with limited access to the sea

2016

International audience; Seasonal distribution of dinoflagellate cysts were studied at five surface sediment study stations in Ghar El MelhLagoon (GML) (Tunisia) in relation to physicochemical parameters and phytoplankton abundance in the watercolumn. At least sixteen dinocyst types were identified, dominated mainly by Protoperidinium spp., Scrippsiellatrochoidea complex, Lingulodinum machaerophorum, Alexandrium spp. and Gymnodinium spp., along with manyround brown cysts. Cyst abundance ranged from 0 to 229 g−1 dry sediment. No significant differences in cyst distributionwere found among stations, though a significant variation was observed among seasons with cyst dominancein autumn. No sign…

0106 biological sciencesGeologic SedimentsTunisia010504 meteorology & atmospheric sciencesGhar El Melh lagoonAquatic ScienceBiologyOceanography01 natural sciences[ SDE ] Environmental SciencesMediterranean seaWater columnPhytoplanktonparasitic diseasesMediterranean SeaAnimalsDinocystDominance (ecology)Seawater14. Life underwaterGymnodiniumAbiotic factors0105 earth and related environmental sciencesEcology010604 marine biology & hydrobiologyDinoflagellate cystsDinoflagellateSedimentbiology.organism_classificationPollutionOceanography[SDE]Environmental SciencesPhytoplanktonDinoflagellidaSeasonsEnvironmental Monitoring
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Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis,…

2019

[Background] Monogenean flatworms are the main fish ectoparasites inflicting serious economic losses in aquaculture. The polyopisthocotylean Sparicotyle chrysophrii parasitizes the gills of gilthead sea bream (GSB, Sparus aurata) causing anaemia, lamellae fusion and sloughing of epithelial cells, with the consequent hypoxia, emaciation, lethargy and mortality. Currently no preventive or curative measures against this disease exist and therefore information on the host-parasite interaction is crucial to find mitigation solutions for sparicotylosis. The knowledge about gene regulation in monogenean-host models mostly comes from freshwater monopysthocotyleans and almost nothing is known about …

0106 biological sciencesGillGillsApoptosis01 natural sciencesTranscriptomeSparus aurataGene expression0303 health sciencesHigh-Throughput Nucleotide Sequencingmedicine.anatomical_structureLiverHelminthiasis AnimalMonogeneaBiotechnologyResearch ArticleFish Proteinsanimal structureslcsh:QH426-470lcsh:BiotechnologyFisheriesSpleenBiologyMicrobiologyHost-Parasite Interactions03 medical and health sciencesImmune systemIllumina RNA-seqImmunitylcsh:TP248.13-248.65GeneticsmedicineAutophagyAnimals14. Life underwaterPlatelet activationImmune responseTranscriptomics030304 developmental biologyCell ProliferationSequence Analysis RNASparus aurata Sparicotyle chrysophrii Gills Monogenea Ectoparasites Illumina RNA-seq Transcriptomics Apoptosis Immune responseGene Expression ProfilingAquatic animalSea Breamlcsh:GeneticsGene Expression RegulationPlatyhelminthsSparicotyle chrysophriiEctoparasitesSpleen010606 plant biology & botany
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Morphological variations of crossed-lamellar ultrastructures of Glycymeris bimaculata (Bivalvia) serve as a marine temperature proxy

2020

Abstract Bivalve shells are among the most promising archives for high-resolution seawater temperature reconstructions. However, despite major research advances in bivalve sclerochronology over the past decades, estimating water temperature from shells remains a challenging task. This is largely because the most frequently used and widely accepted temperature proxy in bivalves, i.e., the shell oxygen isotope (δ18Oshell) value, also requires knowledge of changes in δ18O of the water (δ18Owater) in which the bivalve lived, which is rarely available for ancient environments. According to a few recent studies, the size and shape of individual biomineral units (BMUs) of the shell ultrastructure …

0106 biological sciencesGlycymeris010504 meteorology & atmospheric sciencesbiologyBrackish waterδ18O010604 marine biology & hydrobiologyGlycymeris bimaculataAquatic ScienceOceanographybiology.organism_classificationBivalvia01 natural sciencesIsotopes of oxygenOceanography13. Climate actionSclerochronologyPaleoclimatology14. Life underwaterGeology0105 earth and related environmental sciencestemperature proxy ; bivalve sclerochronology ; paleoclimatology ; ultrastructure ; nearshore environment ; Adriatic Sea
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Are mussels able to distinguish underwater sounds? Assessment of the reactions of Mytilus galloprovincialis after exposure to lab-generated acoustic …

2016

This study examined the effects of lab-generated acoustic signals on the behaviour and biochemistry of Mediterranean mussels (Mytilus galloprovincialis). The experiment was carried out in a tank equipped with a video-recording system using six groups of five mussels exposed to five acoustic treatments (each treatment was replicated three times) for 30 min. The acoustic signals, with a maximum sound pressure level of 150 dB rms re 1 μPa, differed in frequency range as follows: low (0.1–5 kHz), mid-low (5–10 kHz), mid (10–20 kHz), mid-high (20–40 kHz) and high (40–60 kHz). The exposure to sweeps did not produce any significant changes in the mussels' behaviour. Conversely, the specimens expos…

0106 biological sciencesHemocytesPhysiologyVideo RecordingMytilus galloprovincialiLow frequency band010501 environmental sciencesAcoustic signal01 natural sciencesBiochemistryAnimal scienceBiochemical streHemolymphAnimalsHSP70 Heat-Shock ProteinsSeawaterBehaviourUnderwaterSound pressureMolecular BiologyEcosystem0105 earth and related environmental sciencesMytilusVideo recordingBehavior Animalbiology010604 marine biology & hydrobiologyBiochemical stressProteinsAcousticsbiology.organism_classificationMytilusFisheryGlucoseAcoustic StimulationAcetylcholinesteraseFish <Actinopterygii>Comparative Biochemistry and Physiology Part A: Molecular &amp; Integrative Physiology
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Improving the conservation of Mediterranean Chondrichthyans : the ELASMOMED DNA barcode reference library

2017

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample …

0106 biological sciencesHeredityMolecular biologySpeciationBiodiversitySettore BIO/05 - Zoologialcsh:MedicineJuvenileEvolutionary biologyBarcodeBiochemistry01 natural sciencesDNA barcodinglaw.inventionlawDNA librarieslcsh:ScienceChondrichthyesSpecimens IdentificationData ManagementMolecular systematicsMultidisciplinaryGeographyMediterranean RegionEcologyCryptic speciationFishesBiodiversityMorphological stasiMitochondrial DNANucleic acidsGenetic MappingPhylogeographyBiogeographyDNA Barcode Reference LibraryDNA barcoding TaxonomicVertebratesDNA data banksResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEvolutionary ProcessesEvolutionary systematicsBarcoding Chondrichthyans Conservation Mediterranean Sea mtDNACartilaginous fishConservationBiologyPhylogeographic structure010603 evolutionary biologyMolecular taxonomySpecies SpecificityEndemic SpeciesGeneticsMediterranean SeaAnimalsDNA Barcoding TaxonomicDNA barcoding14. Life underwaterEndemismTaxonomyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNAResearch and analysis methodsPhylogeographyMolecular biology techniquesTaxonHaplotypesThreatened speciesEarth SciencesSharksConservation statuslcsh:QPopulation GeneticsMarine biodiversity conservationElasmobranchii
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New Hettangian tracks from the Causses Basin (Lozère, southern France) complement the poor fossil record of earliest Jurassic crocodylomorphs in Euro…

2017

International audience; A new vertebrate ichnological assemblage is described from the Hettangian Dolomitic Formation of the Causses Basin, at Le Serre (Lozère, southern France). We report tracks that complement the poor fossil record of lowermost Jurassic crocodylomorphs in Europe. Tetradactyl pes and pentadactyl manus imprints form a unique trackway. Traces are ascribed to Batrachopus isp. and they represent the third occurrence of this ichnogenus in European Hettangian geological formations. This is the first report of Batrachopus in Hettangian deposits of the Causses Basin. The tracks share some similarities with Batrachopus deweyi previously described from the Sinemurian of the Causses…

0106 biological sciencesHettangian010506 paleontologyFossil Recordsouthern FranceCrocodylomorph tracksStructural basin[ SDU.STU.ST ] Sciences of the Universe [physics]/Earth Sciences/Stratigraphy010603 evolutionary biology01 natural sciencesComplement (complexity)PaleontologyLower Jurassicdinosaur tracks[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyAssemblage (archaeology)14. Life underwaterGeneral Agricultural and Biological Sciences[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyCausses BasinGeology0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology
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Captive breeding of Margaritifera auricularia (Spengler, 1793) and its conservation importance

2019

Margaritifera auricularia is one of the most endangered freshwater mussels (Bivalvia, Unionida) in the world. Since 2013, the abundance of this species in the Ebro River basin (Spain) has sharply declined, driving the species to the verge of regional extinction. Therefore, any management measures that might facilitate the recovery of this species would be essential for its conservation. During 2014–2016, captive breeding of M. auricularia allowed the production of >106 juveniles, out of which 95% were released into the natural environment, and 5% were grown in the laboratory under controlled conditions. The aim of this experimental work was to establish the best culture conditions for the s…

0106 biological sciencesHistorygrowth:Ciências Biológicas [Ciências Naturais]Library scienceAquatic Science010603 evolutionary biology01 natural sciencessurvivalService departmentMargaritiferidaeCaptive breeding14. Life underwaterNature and Landscape ConservationMargaritifera auriculariaCiências Naturais::Ciências BiológicasScience & TechnologyEcologybiology010604 marine biology & hydrobiologyconservationendangered species15. Life on landfreshwater musselbiology.organism_classificationRural developmentcaptivityAlcantara
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Harvest selection on multiple traits in the wild revealed by aquatic animal telemetry

2019

12 pages, 6 figures, 5 tables.-- This is an open access article under the terms of the Creat ive Commo ns Attri bution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciencesHome rangevulnerabilityhome rangeBiology010603 evolutionary biology01 natural sciencescatchability03 medical and health sciencesHomarus gammaruslcsh:QH540-549.5DecapodaEuropean lobster14. Life underwaterrepeatabilityacoustic telemetryEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Original Research030304 developmental biologyNature and Landscape Conservation0303 health sciencesEcologyEcologyDecapodaAquatic animalVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497biology.organism_classificationPeer reviewEvolutionary ecologylcsh:EcologyFisheries managementmovementfishery selection
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