Search results for "VAE"

showing 10 items of 161 documents

Phylogenetic analysis of cryptic speciation in the polychaete Pygospio elegans

2012

Development in marine invertebrate species can take place through a variety of modes and larval forms, but within a species, developmental mode is typically uniform. Poecilogony refers to the presence of more than one mode of development within a single species. True poecilogony is rare, however, and in some cases, apparent poecilogony is actually the result of variation in development mode among recently diverged cryptic species. We used a phylogenetic approach to examine whether poecilogony in the marine polychaete worm, Pygospio elegans, is the result of cryptic speciation. Populations of worms identified as P. elegans express a variety of developmental modes including planktonic, broode…

COIfungilarvaepopulation structuredevelopmental mode
researchProduct

Phylogenetic analysis of cryptic speciation in the polychaete Pygospio elegans.

2011

Development in marine invertebrate species can take place through a variety of modes and larval forms, but within a species, developmental mode is typically uniform. Poecilogony refers to the presence of more than one mode of development within a single species. True poecilogony is rare, however, and in some cases, apparent poecilogony is actually the result of variation in development mode among recently diverged cryptic species. We used a phylogenetic approach to examine whether poecilogony in the marine polychaete worm, Pygospio elegans, is the result of cryptic speciation. Populations of worms identified as P. elegansooded, and intermediate larvae; these modes are found both within and …

COIlarvaepopulation structureOriginal Researchdevelopmental modeEcology and evolution
researchProduct

Bacteria Associated with Copestylum (Diptera, Syrphidae) Larvae and Their Cactus Host Isolatocereus dumortieri

2011

We describe the gut bacterial diversity inhabiting two saprophagous syrphids and their breeding substrate (decayed tissues of the columnar cactus Isolatocereus dumortieri). We analyzed the gut microbiota of Copestylum latum (scooping larvae that feed on decayed cactus tissues) and Copestylum limbipenne (whose larvae can also feed on semiliquid tissues) using molecular techniques. DNA was extracted from larval guts and cactus tissues. The V1-V3 region of the 16S rRNA genes was amplified and sequenced. A total of 31079 sequences were obtained. The main findings are: C. limbipenne is dominated by several Enterobacteriaceae, including putative nitrogen-fixing genera and pectinolitic species and…

CactaceaeEpidemiologyPopulation DynamicsCopestylumCopestylumGene Expressionlcsh:MedicineGut floraMicrobiologíaLarvaeNucleic AcidsMolecular Cell BiologyZoologíalcsh:SciencePhylogenyIsolatocereus dumortieriLarvaMultidisciplinaryEcologybiologyCactusBiodiversityBiotaEnterobacteriaceaeCommunity EcologyLarvaCactusResearch ArticleMolecular Sequence DataMicrobiologyHost-Parasite InteractionsMicrobial EcologyPhylogeneticsBotanyGeneticsAnimalsSyrphidaeBiologyPopulation BiologyBacteriaHost (biology)Dipteralcsh:Rfungibiology.organism_classificationRNAlcsh:QZoologyEntomologyBacteriaEcological EnvironmentsPLoS ONE
researchProduct

Dysfunction of Oskyddad causes Harlequin-type ichthyosis-like defects in Drosophila melanogaster.

2020

Prevention of desiccation is a constant challenge for terrestrial organisms. Land insects have an extracellular coat, the cuticle, that plays a major role in protection against exaggerated water loss. Here, we report that the ABC transporter Oskyddad (Osy)—a human ABCA12 paralog—contributes to the waterproof barrier function of the cuticle in the fruit fly Drosophila melanogaster. We show that the reduction or elimination of Osy function provokes rapid desiccation. Osy is also involved in defining the inward barrier against xenobiotics penetration. Consistently, the amounts of cuticular hydrocarbons that are involved in cuticle impermeability decrease markedly when Osy activity is reduced. …

Cancer ResearchLife CyclesEmbryologyMutantCell MembranesATP-binding cassette transporterQH426-470Biochemistry0302 clinical medicineLarvaeAnimal WingsLoss of Function MutationMedicine and Health SciencesDrosophila ProteinsAnimal AnatomyGenetics (clinical)Barrier functionSkin0303 health sciencesbiologyDrosophila MelanogasterEukaryotaAnimal ModelsHarlequin IchthyosisLipidsCell biologyInsectsExperimental Organism SystemsEmbryology and OrganogenesisDrosophilaDrosophila melanogasterCellular Structures and OrganellesAnatomyIntegumentary SystemEmbryologie et organogenèseDrosophila ProteinAutre (Sciences du Vivant)Research Article[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]ArthropodaResearch and Analysis Methods03 medical and health sciencesModel OrganismsExtracellularGeneticsAnimalsABCA12DesiccationMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyEmbryosfungiOrganismsBiology and Life SciencesCell Biologybiology.organism_classificationInvertebrates[SDV.BDD.EO]Life Sciences [q-bio]/Development Biology/Embryology and Organogenesisbiology.proteinAnimal StudiesATP-Binding Cassette TransportersEpidermisZoology030217 neurology & neurosurgeryIchthyosis LamellarDevelopmental BiologyPLoS Genetics
researchProduct

aPKCζ cortical loading is associated with Lgl cytoplasmic release and tumor growth in Drosophila and human epithelia

2007

Atypical protein kinase C (aPKC) and Lethal giant larvae (Lgl) regulate apical-basal polarity in Drosophila and mammalian epithelia. At the apical domain, aPKC phosphorylates and displaces Lgl that, in turn, maintains aPKC inactive at the basolateral region. The mutual exclusion of these two proteins seems to be crucial for the correct epithelial structure and function. Here we show that a cortical aPKC loading induces Lgl cytoplasmic release and massive overgrowth in Drosophila imaginal epithelia, whereas a cytoplasmic expression does not alter proliferation and epithelial overall structure. As two aPKC isoforms (iota and zeta) exist in humans and we previously showed that Drosophila Lgl i…

Cancer Researchmedicine.medical_specialtyCytoplasmAPKCz; Cell polarity; Drosophila; Hugl-1; Lethal giant larvae; Ovarian epithelial cancersAPKCzEpitheliumInternal medicineDrosophilidaeCell polarityGeneticsmedicineAnimalsDrosophila ProteinsHumansWings AnimalMolecular BiologyProtein kinase CProtein Kinase CCell ProliferationRegulation of gene expressionOvarian NeoplasmsbiologyTumor Suppressor ProteinsGene Expression Regulation DevelopmentalHugl-1Lethal giant larvaebiology.organism_classificationProtein subcellular localization predictionEpitheliumOvarian epithelial cancersCell biologyEndocrinologymedicine.anatomical_structureDrosophila melanogasterPhenotypeGene Expression RegulationCell polarityFemaleDrosophilaDrosophila melanogasterDrosophila Protein
researchProduct

Sensitivity of the Cherenkov Telescope Array to spectral signatures of hadronic PeVatrons with application to Galactic Supernova Remnants

2023

The local Cosmic Ray (CR) energy spectrum exhibits a spectral softening at energies around 3~PeV. Sources which are capable of accelerating hadrons to such energies are called hadronic PeVatrons. However, hadronic PeVatrons have not yet been firmly identified within the Galaxy. Several source classes, including Galactic Supernova Remnants (SNRs), have been proposed as PeVatron candidates. The potential to search for hadronic PeVatrons with the Cherenkov Telescope Array (CTA) is assessed. The focus is on the usage of very high energy $\gamma$-ray spectral signatures for the identification of PeVatrons. Assuming that SNRs can accelerate CRs up to knee energies, the number of Galactic SNRs whi…

Cherenkov Telescope ArrayGamma rays: generalstatistical [methods]energy spectrumFOS: Physical sciencesVHESettore FIS/05 - Astronomia E Astrofisicacosmic raysMethods: data analysissupernovadata analysis [methods][PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det]Cosmic raysInstrumentation and Methods for Astrophysics (astro-ph.IM)Cherenkov Telescope Arra ; alactic Supernova Remnants ; PeVatrons ;Methods: statisticalgalactic PeVatronsHigh Energy Astrophysical Phenomena (astro-ph.HE)emission spectrum) supernovae: general [(stars]Astronomy and AstrophysicssensitivityobservatoryGalactic PeVatronscosmic radiationspectralgalaxyhadron(Stars:) supernovae: generalAstrophysics - High Energy Astrophysical PhenomenaAstrophysics - Instrumentation and Methods for Astrophysics[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph]statisticalgeneral [gamma rays]signature
researchProduct

Photometric and Spectroscopic Properties of Type Ia Supernova 2018oh with Early Excess Emission from the $Kepler$ 2 Observations

2019

Supernova (SN) 2018oh (ASASSN-18bt) is the first spectroscopically-confirmed type Ia supernova (SN Ia) observed in the $Kepler$ field. The $Kepler$ data revealed an excess emission in its early light curve, allowing to place interesting constraints on its progenitor system (Dimitriadis et al. 2018, Shappee et al. 2018b). Here, we present extensive optical, ultraviolet, and near-infrared photometry, as well as dense sampling of optical spectra, for this object. SN 2018oh is relatively normal in its photometric evolution, with a rise time of 18.3$\pm$0.3 days and $\Delta$m$_{15}(B)=0.96\pm$0.03 mag, but it seems to have bluer $B - V$ colors. We construct the "uvoir" bolometric light curve hav…

DATA RELEASEULTRAVIOLETFACTORY OBSERVATIONSFOS: Physical sciencesAstrophysicsType (model theory)medicine.disease_causeSN 2011FE01 natural sciencesLuminosityPhotometry (optics)individual (SN 2018oh) [supernovae]supernovae: generalCIRCUMSTELLAR MATERIAL0103 physical sciencesmedicineSPECTRAAbsorption (logic)Ejecta010303 astronomy & astrophysicssupernovae: individualQCSolar and Stellar Astrophysics (astro-ph.SR)QBLIGHT CURVESHigh Energy Astrophysical Phenomena (astro-ph.HE)PhysicsHIGH-VELOCITY FEATURES010308 nuclear & particles physicsAstronomy and AstrophysicsLight curveSupernovaAstrophysics - Solar and Stellar Astrophysics13. Climate actionSpace and Planetary ScienceIMPROVED DISTANCESWHITE-DWARF MODELSAstrophysics - High Energy Astrophysical Phenomena[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph]general [supernovae]Ultraviolet
researchProduct

Manipulating mtDNA in vivo reprograms metabolism via novel response mechanisms.

2019

Mitochondria have been increasingly recognized as a central regulatory nexus for multiple metabolic pathways, in addition to ATP production via oxidative phosphorylation (OXPHOS). Here we show that inducing mitochondrial DNA (mtDNA) stress in Drosophila using a mitochondrially-targeted Type I restriction endonuclease (mtEcoBI) results in unexpected metabolic reprogramming in adult flies, distinct from effects on OXPHOS. Carbohydrate utilization was repressed, with catabolism shifted towards lipid oxidation, accompanied by elevated serine synthesis. Cleavage and translocation, the two modes of mtEcoBI action, repressed carbohydrate rmetabolism via two different mechanisms. DNA cleavage activ…

DYNAMICSLife CyclesSTRESSMITOCHONDRIAL-DNAADN mitocondrialQH426-470BiochemistryOxidative PhosphorylationLarvaeAdenosine TriphosphateTRANSCRIPTIONPost-Translational ModificationEnergy-Producing OrganellesProtein MetabolismOrganic CompoundsDrosophila MelanogasterChemical ReactionsMETHYLATIONEukaryotaAcetylationAnimal ModelsDNA Restriction EnzymesKetonesCellular ReprogrammingMitochondrial DNAMitochondriaTRANSLOCATIONNucleic acidsInsectsChemistryDROSOPHILAExperimental Organism SystemsPhysical SciencesSURVIVALCarbohydrate MetabolismCellular Structures and OrganellesMetabolic Networks and PathwaysResearch ArticlePyruvateArthropodaForms of DNAeducationCarbohydratesBioenergeticsResearch and Analysis MethodsDNA MitochondrialBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologyModel OrganismsGenetiikka kehitysbiologia fysiologia - Genetics developmental biology physiologyGeneticsAnimalsHumansBiology and life sciencesOrganic ChemistryOrganismsChemical CompoundsProteinsDNACell BiologyInvertebratesDELETIONSOxidative StressMetabolismMAINTENANCEDiabetes Mellitus Type 2Animal Studies1182 Biochemistry cell and molecular biologyAcidsDevelopmental BiologyPLoS Genetics
researchProduct

Ecotoxicological status of a watercourse recovering from heavy loading by pulp and paper industry

2013

EROD activitykidusvauriotpalautuminenkuormitussedimentsdissolutiongill damagesedimentitmassa- ja paperiteollisuuswood extractiveliukeneminenrecoverypulp and paper industrysedimentwood extractivesuuteaineetcaddis larvae
researchProduct

Role of protozooplankton in the diet of North Sea autumn spawning herring (Clupea harengus) larvae

2022

AbstractThe role of small prey (< 200 µm) in larval marine fish nutrition is largely understudied. Here, we explore the contribution of protozooplankton (PZP 20–200 µm) to larval fish diets, compared to metazoan microzooplankton (MZP 55–200 µm). More specifically, we tested whether the contribution of PZP increased during the low productivity season and decreased as larvae grow. We used North Sea autumn spawning herring (Clupea harengus) as a case study, as it is a key species with high commercial and ecological importance. In autumn and winter, the potential PZP and MZP prey was dominated by cells < 50 µm (mainly Gymnodiniales, Pronoctiluca pelagica,Tripos spp. and Strombidium spp.),…

Early life stagesEcologyBusiness Manager projecten Midden-NoordMicrozooplankton–ichthyoplankton linkFish larvaeVDP::Matematikk og Naturvitenskap: 400VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497Aquatic ScienceTrophodynamicsRNA/DNABusiness Manager projects Mid-NorthEcology Evolution Behavior and SystematicsStable isotopesMarine Biology
researchProduct