Search results for "VISIA"

showing 10 items of 764 documents

Serine- and Threonine/Valine-Dependent Activation of PDK and Tor Orthologs Converge on Sch9 to Promote Aging

2014

Dietary restriction extends longevity in organisms ranging from bacteria to mice and protects primates from a variety of diseases, but the contribution of each dietary component to aging is poorly understood. Here we demonstrate that glucose and specific amino acids promote stress sensitization and aging through the differential activation of the Ras/cAMP/PKA, PKH1/2 and Tor/S6K pathways. Whereas glucose sensitized cells through a Ras-dependent mechanism, threonine and valine promoted cellular sensitization and aging primarily by activating the Tor/S6K pathway and serine promoted sensitization via PDK1 orthologs Pkh1/2. Serine, threonine and valine activated a signaling network in which Sch…

ThreonineCancer ResearchAgingSerineMice0302 clinical medicineSettore BIO/13 - Biologia ApplicataGene Expression Regulation FungalMolecular Cell BiologySerineSignaling in Cellular ProcessesThreonineGenetics (clinical)Cellular Stress Responses0303 health sciencesageing longevity Sch9 Tor Pkhs nutrients amino acidssurvival stress resistanceMechanisms of Signal TransductionValineCell biologyBiochemistryPhosphorylationSignal transductionResearch ArticleSignal TransductionSaccharomyces cerevisiae Proteinslcsh:QH426-470Adenylyl Cyclase Signaling PathwayLongevityP70-S6 Kinase 1Ras SignalingSaccharomyces cerevisiaeBiologyMicrobiologySignaling Pathways3-Phosphoinositide-Dependent Protein Kinases03 medical and health sciencesModel OrganismsStress PhysiologicalGeneticsAnimalsGene NetworksProtein kinase AMolecular BiologyTranscription factorBiologyEcology Evolution Behavior and Systematics030304 developmental biologySerine/threonine-specific protein kinase[SDV.GEN]Life Sciences [q-bio]/GeneticsCyclic AMP-Dependent Protein Kinaseslcsh:GeneticsGlucoseFoodTor SignalingProtein Kinases030217 neurology & neurosurgeryTranscription Factors
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Ultrastructural changes of sparkling wine lees during long-term aging in real enological conditions.

2012

Ultrastructural changes of lees of three series of sparkling wines produced using the traditional method during long-term aging (4 years) were assessed by high-pressure freezing in combination with transmission electron microscopy. The stratified structure of the cell wall disappeared throughout aging. After 18 months, the microfibrous material of the cell wall appeared more diffuse and the amorphous midzone of the inner wall layer was progressively degraded. From 30 months onward, the cell wall consisted of a tangled structure of fibers. In spite of these changes, the cell wall of yeasts remained unbroken at 48 months of wine aging. Cell membrane breakage was observed for the first time in…

Time FactorsAutolysis (wine)Aging of wineCell MembraneWineGeneral MedicineSaccharomyces cerevisiaeBiologyApplied Microbiology and BiotechnologyMicrobiologyLeesPlasmolysisCell wallCell membranemedicine.anatomical_structureBiochemistryMicroscopy Electron TransmissionCell WallFreezingPeriplasmmedicineBiophysicsUltrastructureAutophagyMicroautophagyFEMS yeast research
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Release of macromolecules by Saccharomyces cerevisiae during ageing of French flor sherry wine “Vin jaune”

2003

The French flor sherry wine "Vin jaune" spends 6 years and 3 months in the same barrel under a yeast velum. Because of temperature variations in the cellars, this velum sinks partially into the wine and a deposit of dead yeasts cells accumulates in the bottom of the barrels, favouring the formation of new velum. Growth and autolysis occur simultaneously. This study investigated the evolution of macromolecules released by yeasts during the ageing of "Vin jaune" in a model system closely simulating winemaking. It was observed that the release of macromolecules during the formation of the velums by living yeasts was low but greatly increased when the velums fell and yeast viability decreased. …

Time FactorsFood HandlingAutolysis (wine)Saccharomyces cerevisiaeFlorMannoseWineSaccharomyces cerevisiaeBiologyModels BiologicalMicrobiologychemistry.chemical_compoundBacteriolysisBiomassParticle SizeWinemakingWineProteinsGeneral Medicinebiology.organism_classificationYeastBiochemistrychemistryFermentationFood MicrobiologyCarbohydrate MetabolismFermentationFood ScienceInternational Journal of Food Microbiology
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Quantifying the individual effects of ethanol and temperature on the fitness advantage of Saccharomyces cerevisiae

2011

The presence of Saccharomyces cerevisiae in grape berries and fresh musts is usually very low. However, as fermentation progresses, the population levels of this species considerably increase. In this study, we use the concept of fitness advantage to measure how increasing ethanol concentrations (0-25%) and temperature values (4-46 °C) in wine fermentations affects competition between S. cerevisiae and several non-Saccharomyces yeasts (Hanseniaspora uvarum, Torulaspora delbrueckii, Candida zemplinina, Pichia fermentans and Kluyveromyces marxianus). We used a mathematical approach to model the hypothetical time needed for S. cerevisiae to impose itself on a mixed population of the non-Saccha…

Time FactorsPopulationNon-saccharomycesWineSaccharomyces cerevisiaeMicrobiologySaccharomycesFitness advantageIndustrial MicrobiologySaccharomycesTorulaspora delbrueckiiKluyveromyces marxianusBotanyWine fermentationEthanol fuelFood scienceeducationFermentation in winemakingWineeducation.field_of_studyTemperaturesbiologyEthanolTemperaturebiology.organism_classificationCandida zemplininaFermentationFood ScienceFood Microbiology
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Comprehensive transcriptional analysis of the oxidative response in yeast

2008

The oxidative stress response in Saccharomyces cerevisiae has been analyzed by parallel determination of mRNA levels and transcription rates for the entire genome. A mathematical algorithm has been adapted for a dynamic situation such as the response to stress, to calculate theoretical mRNA decay rates from the experimental data. Yeast genes have been grouped into 25 clusters according to mRNA level and transcription rate kinetics, and average mRNA decay rates have been calculated for each cluster. In most of the genes, changes in one or both experimentally determined parameters occur during the stress response. 24% of the genes are transcriptionally induced without an increase inmRNAlevels…

Time FactorsTranscription GeneticSaccharomyces cerevisiaeResponse elementSaccharomyces cerevisiaeBiochemistryModels BiologicalEvolution MolecularFungal ProteinsTranscription (biology)Gene Expression Regulation FungalP-bodiesProtein biosynthesisCluster AnalysisRNA MessengerRRNA processingMolecular BiologyGeneMessenger RNAbiologyCell Biologybiology.organism_classificationMolecular biologyCell biologyOxygenKineticsOxidative StressModels ChemicalRNARibosomes
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Oxidative stress responses and lipid peroxidation damage are induced during dehydration in the production of dry active wine yeasts.

2009

The tolerance of the yeast Saccharomyces cerevisiae to desiccation is important for the use of this microorganism in the wine industry, since active dry wine yeast is routinely used as starter for must fermentations. Many studies have shown the complexity of the cellular effects caused by water loss, including oxidative injuries on macromolecular components. However the technological interest of yeast drying was not addressed in those studies, and the dehydration conditions were far from the industrial practice. In the present study a molecular approach was used to characterize the relevant injuring conditions during pilot plant dehydrations under two different drying temperatures (i.e., 35…

Time FactorsWineSaccharomyces cerevisiaeBiologymedicine.disease_causeMicrobiologyLipid peroxidationchemistry.chemical_compoundIndustrial MicrobiologyGlutaredoxinGene Expression Regulation FungalmedicineBiomassDesiccationWinemakingWinefood and beveragesGeneral MedicineGlutathioneYeastYeast in winemakingOxidative StressBiochemistrychemistryFermentationLipid PeroxidationOxidation-ReductionOxidative stressFood ScienceInternational journal of food microbiology
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Lipid and fatty acid variations inCiona intestinalis ovary after tri-n-butyltin(IV)chloride exposure

2005

Reduction of total lipids (TL) content and significant variations of triglyceride (TG) and phospholipid (PL) fractions were observed as a consequence of exposure of Ciona intestinalis ovaries to tributyltin chloride (TBTCL) solutions. In particular, an evident TG decrease and a PL increase were observed, which probably provoked an increment in membrane fluidity, because of the high concentration of long chain fatty acids and, as a consequence, PL. This could be a cell adaptive standing mechanism towards the pollutants, as observed in Saccharomyces cerevisiae. Also the increase in the content of the polyunsaturated fatty acids (PUFA), important in the synthesis of compounds such as prostagla…

Total lipidsCiona intestinaliChlorideFluiditytributyltinstresschemistry.chemical_compoundSettore BIO/10 - BiochimicaMembrane fluiditychemistry.chemical_classificationbiologymembrane fluidityarticlepolyunsaturated fatty acidBiological membranemedicine.anatomical_structureBiochemistrySettore CHIM/03 - Chimica Generale E InorganicaSynthesis (chemical)pollutantprostaglandintriacylglyceroladaptive behaviorPolyunsaturated fatty acidmedicine.drugSettore BIO/07 - EcologiaPhospholipidOvarylipid compositionSaccharomyces cerevisiaelong chain fatty acidOvarieInorganic ChemistrylipidmedicineCiona intestinalisdefense mechanismPolyunsaturated fatty acids (PUFA)TriglyceridesphospholipidnonhumanTriglycerideProstaglandineOvaryFatty acidGeneral ChemistryTBTClFatty acidbiology.organism_classificationprostaglandin synthesichemistryCellApplied Organometallic Chemistry
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Killer toxin producing strains of the yeasts Hanseniaspora uvarum and Pichia kluyveri

1988

By heat treatment killer strains of the type K1 of Saccharomyces cerevisiae that are known to harbour dsRNA plasmids were completely cured, whereas only a small fraction of the clones of the killer type K2 had lost the dsRNA dependent killer character. The K2 killers but not the strains of killer type K1 were easily cured by cycloheximide. Killer strains of Hanseniaspora uvarum were not curable by heat treatment. Curing was successfull with cycloheximide or 5-fluorouracil. Two double-stranded RNA plasmids were detected in the killer strains of H. uvarum. The smaller dsRNA plasmid was absent in the strains that were cured of their killer character by 5-fluorouracil. The killer character of H…

ToxinfungiSaccharomyces cerevisiaeRNAchemical and pharmacologic phenomenaGeneral MedicineCycloheximideSpheroplastBiologybiology.organism_classificationmedicine.disease_causeBiochemistryMicrobiologyMicrobiologychemistry.chemical_compoundRNA silencingPlasmidchemistryGeneticsmedicineMolecular BiologyGeneArchives of Microbiology
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Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle

2015

The particular behaviour of eukaryotic RNA polymerases along different gene regions and amongst distinct gene functional groups is not totally understood. To cast light onto the alternative active or backtracking states of RNA polymerase II, we have quantitatively mapped active RNA polymerases at a high resolution following a new biotin-based genomic run-on (BioGRO) technique. Compared with conventional profiling with chromatin immunoprecipitation, the analysis of the BioGRO profiles in Saccharomyces cerevisiae shows that RNA polymerase II has unique activity profiles at both gene ends, which are highly dependent on positioned nucleosomes. This is the first demonstration of the in vivo infl…

Transcription factoriesSaccharomyces cerevisiae ProteinsTranscription Elongation GeneticTranscription GeneticRNA polymerase II28Saccharomyces cerevisiaeBiology03 medical and health scienceschemistry.chemical_compoundTranscripció genèticaRNA polymeraseGeneticsRNA polymerase IRNA polymerase II holoenzyme9030304 developmental biologyGenetics0303 health sciencesGeneral transcription factorGene regulation Chromatin and Epigenetics030302 biochemistry & molecular biologyRNA Polymerase IIIGenomicsNucleosomesCell biologychemistryTranscription Termination Geneticbiology.proteinRNARNA Polymerase IIGenome FungalTranscription factor II DSmall nuclear RNA
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A complete set of nascent transcription rates for yeast genes

2010

The amount of mRNA in a cell is the result of two opposite reactions: transcription and mRNA degradation. These reactions are governed by kinetics laws, and the most regulated step for many genes is the transcription rate. The transcription rate, which is assumed to be exercised mainly at the RNA polymerase recruitment level, can be calculated using the RNA polymerase densities determined either by run-on or immunoprecipitation using specific antibodies. The yeast Saccharomyces cerevisiae is the ideal model organism to generate a complete set of nascent transcription rates that will prove useful for many gene regulation studies. By combining genomic data from both the GRO (Genomic Run-on) a…

Transcription factoriesSaccharomyces cerevisiae ProteinsTranscription GeneticRNA StabilityGenes FungalDNA transcriptionlcsh:MedicineYeast and Fungal ModelsRNA polymerase IISaccharomyces cerevisiaeBiologyBiochemistryGenètica molecularchemistry.chemical_compoundSaccharomycesModel OrganismsMolecular cell biologyTranscripció genèticaGene Expression Regulation FungalRNA polymeraseGeneticsRNA MessengerRNA synthesislcsh:ScienceBiologyRNA polymerase II holoenzymeGeneticsMultidisciplinaryGeneral transcription factorGene Expression Profilinglcsh:RPromoterGenomicsChromatinFunctional GenomicsNucleic acidsGenòmicaRNA processingchemistrybiology.proteinRNAlcsh:QRNA Polymerase IIGene expressionTranscription factor II DTranscription factor II BResearch Article
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