Search results for "VISIA"
showing 10 items of 764 documents
Sulfur transfer and activation by ubiquitin-like modifier system Uba4•Urm1 link protein urmylation and tRNA thiolation in yeast.
2017
Urm1 is a unique dual-function member of the ubiquitin protein family and conserved from yeast to man. It acts both as a protein modifier in ubiquitin-like urmylation and as a sulfur donor for tRNA thiolation, which in concert with the Elongator pathway forms 5-methoxy-carbonyl-methyl-2-thio (mcm5s2) modified wobble uridines (U34) in anticodons. Using Saccharomyces cerevisiae as a model to study a relationship between these two functions, we examined whether cultivation temperature and sulfur supply previously implicated in the tRNA thiolation branch of the URM1 pathway also contribute to proper urmylation. Monitoring Urm1 conjugation, we found urmylation of the peroxiredoxin Ahp1 is suppre…
Comparative genomics among Saccharomyces cerevisiae x Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different…
2012
Abstract Background Interspecific hybrids between S. cerevisiae × S. kudriavzevii have frequently been detected in wine and beer fermentations. Significant physiological differences among parental and hybrid strains under different stress conditions have been evidenced. In this study, we used comparative genome hybridization analysis to evaluate the genome composition of different S. cerevisiae × S. kudriavzevii natural hybrids isolated from wine and beer fermentations to infer their evolutionary origins and to figure out the potential role of common S. kudriavzevii gene fraction present in these hybrids. Results Comparative genomic hybridization (CGH) and ploidy analyses carried out in thi…
Cytoplasmic 5′-3′ exonuclease Xrn1p is also a genome-wide transcription factor in yeast
2014
The 5′ to 3′ exoribonuclease Xrn1 is a large protein involved in cytoplasmatic mRNA degradation as a critical component of the major decaysome. Its deletion in the yeast Saccharomyces cerevisiae is not lethal, but it has multiple physiological effects. In a previous study, our group showed that deletion of all tested components of the yeast major decaysome, including XRN1, results in a decrease in the synthetic rate and an increase in half-life of most mRNAs in a compensatory manner. Furthermore, the same study showed that the all tested decaysome components are also nuclear proteins that bind to the 5′ region of a number of genes. In the present work, we show that disruption of Xrn1 activi…
Mecanismos de percepción y de respuesta a bajas temperaturas en Saccharomyces cerevisiae
2014
A lo largo de los años, la levadura S. cerevisiae se ha convertido en organismo modelo tanto en la industria, como en el campo de la investigación básica, debido a sus características metabólicas y su fácil manipulación. Es conocido que, cuando la célula se enfrenta a una situación de estrés, debe modificar su fisiología para mantener la homeostasis celular. En el ámbito industrial, el aumento en la demanda de levaduras con características especiales, ha hecho patente la necesidad de nuevas cepas que se adecuen a los requerimientos y necesidades del consumidor. En esta línea, las estrategias de mejora y selección de cepas industriales se ven limitadas por el escaso conocimiento que disponem…
Improvement of xylose fermentation of Saccharomyces cerevisiae
2012
The increasing need of oil and the negative impacts of fossil fuels on climate change have motivated the research towards environmental friendly alternatives to diminish the use of fossil resources. Until today, bioethanol production and use has increased worldwide. The raw materials used today compete with food industry and conquently, the ethanol production from lignocellulose has been developed intensively. However, to make the processes economically competitive, also pentoses in lignocellulose should be fermented at high rate. Saccharomyces cerevisiae, alias baker’s yeast has an excellent ethanol production capacity but it can not naturally utilize xylose. Several xylose-utilizing S. ce…
Caracterización de los componentes genéticos y ambientales implicados en el envejecimiento de las levaduras vínicas
2012
La mayor parte de la fermentación vínica discurre cuando las células de la levadura Saccharomyces cerevisiae han dejado de dividirse. Así pues, la viabilidad en fase estacionaria, llamada longevidad cronológica (LC), es esencial para que la vinificación se lleve a buen término. En este trabajo de tesis doctoral, se han caracterizado diversos componentes ambientales y genéticos que influyen en la longevidad cronológica de las levaduras vínicas. En cuanto a los componentes ambientales, el incremento de la acidez y la temperatura del medio promueven el envejecimiento. Los polifenoles resveratrol y quercetina y los compuestos de dos carbonos que se producen durante la fermentación, afectan de m…
Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configurati…
2020
mRNA homoeostasis is favoured by crosstalk between transcription and degradation machineries. Both the Ccr4-Not and the Xrn1-decaysome complexes have been described to influence transcription. While Ccr4-Not has been shown to directly stimulate transcription elongation, the information available on how Xrn1 influences transcription is scarce and contradictory. In this study we have addressed this issue by mapping RNA polymerase II (RNA pol II) at high resolution, using CRAC and BioGRO-seq techniques in Saccharomyces cerevisiae. We found significant effects of Xrn1 perturbation on RNA pol II profiles across the genome. RNA pol II profiles at 5ʹ exhibited significant alterations that were com…
A new set of DNA macrochips for the yeast Saccharomyces cerevisiae: features and uses
2004
The yeast Saccharomyces cerevisiae has been widely used for the implementation of DNA chip technologies. For this reason and due to the extensive use of this organism for basic and applied studies, yeast DNA chips are being used by many laboratories for expression or genomic analyses. While membrane arrays (macroarrays) offer several advantages, for many laboratories they are not affordable. Here we report that a cluster of four Spanish molecular-biology yeast laboratories, with relatively small budgets, have developed a complete set of probes for the genome of S. cerevisiae. These have been used to produce a new type of macroarray on a nylon surface. The macroarrays have been evaluated and…
Exclusion of Saccharomyces kudriavzevii from a wine model system mediated by Saccharomyces cerevisiae.
2010
This study investigated the competition and potential hybrid generation between the species Saccharomyces cerevisiae and S. kudriavzevii in a wine-model environment. Our main goal was to understand why S. kudriavzevii has not been found in wine fermentations whilst their hybrids are present. Auxotrophic mutants (Ura(-) and Lys(-)) were used to favour the selection of hybrids and to specifically differentiate the two species in mixed fermentations carried out at different temperatures (17 °C, 24 °C and 31 °C). Both yeasts showed a reduction in their maximum specific growth rates in mixed fermentations, indicating a clear antagonistic effect between the two microorganisms. Temperature played …
Implantable collamer lens with central hole: 3-year follow-up.
2018
Luis Fernández-Vega-Cueto,1 Carlos Lisa,1 José J Esteve-Taboada,2 Robert Montés-Micó,2 José F Alfonso1,3 1Department of Surgery, Fernández-Vega Ophthalmological Institute, Oviedo, Spain; 2Department of Optics and Optometry and Visual Sciences, University of Valencia, Valencia, Spain; 3School of Medicine, University of Oviedo, Oviedo, Spain Purpose: To evaluate the long-term predictability, stability, safety, and efficacy of the V4c Visian implantable collamer lens (ICL) with central hole to correct myopia.Patients and methods: One hundred and eighty-four eyes of 92 patients were evaluated during 3 years after implantation of …