Search results for "Vent"

showing 10 items of 24974 documents

Characterization of eight microsatellite loci for the sea urchin Meoma ventricosa (Spatangoida, Brissidae) through Next Generation Sequencing.

2015

Eight microsatellite loci were characterized for Meoma ventricosa (Lamarck, 1816), a burrowing sea urchin that can be afflicted by a bacterial disease causing localized mass mortality. For the analyzed population (29 individuals from St. Croix, US Virgin Islands), we observed 8.125 mean number of alleles, 0.640 mean observed heterozygosity (Ho) and 0.747 mean expected heterozygosity (He). Two loci showed significant deviations from Hardy-Weinberg equilibrium. Overall, the described loci were characterized by a moderately highlevel of polymorphism suggesting that these markers are useful for a population genetic studyin the Caribbean Sea.

0106 biological sciencesPopulationZoology454 method010603 evolutionary biology01 natural sciencesBiochemistryLoss of heterozygosityMeoma ventricosa03 medical and health sciencesbiology.animal14. Life underwaterAlleleeducationMicrosatellitesSea urchinTagged primer methodEcology Evolution Behavior and Systematics030304 developmental biologySpatangoidaGeneticsCaribbean0303 health scienceseducation.field_of_studyBacterial diseasebiology[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsbiology.organism_classification[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsMicrosatelliteEchinoidSciences exactes et naturelles
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Curcuma longa L. Rhizome Essential Oil from Extraction to Its Agri-Food Applications. A Review

2021

Curcuma longa L. rhizome essential oil is a valuable product in pharmaceutical industry due to its wide beneficial health effects. Novel applications in the agri-food industry where more sustainable extraction processes are required currently and safer substances are claimed for the consumer are being investigated. This review provides information regarding the conventional and recent extraction methods of C. longa rhizome oil, their characteristics and suitability to be applied at the industrial scale. In addition, variations in the chemical composition of C. longa rhizome and leaf essential oils regarding intrinsic and extrinsic factors and extraction methods are also analysed in order to…

0106 biological sciencesPreservativeantioxidantOrganolepticPlant ScienceReview01 natural sciencesessential oillaw.invention<i>Curcuma longa</i>0404 agricultural biotechnologyextraction methodslawchemical compositionCurcumaherbicidalEcology Evolution Behavior and SystematicsEssential oilCurcuma longaEcologybiologybusiness.industryExtraction (chemistry)Botany04 agricultural and veterinary sciencesbiology.organism_classification040401 food scienceBiotechnologyRhizomeAgricultureQK1-989Environmental scienceantimicrobialExtraction methodsagri-food industrybusiness010606 plant biology & botanyPlants
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First data on microflora of loggerhead sea turtle (Caretta caretta) nests from the coastlines of Sicily (Italy)

2020

ABSTRACT Caretta caretta is threatened by many dangers in the Mediterranean basin, but most are human-related. The purposes of this research were: (i) to investigate microflora in samples from six loggerhead sea turtle nests located on the Sicilian coast and (ii) to understand microbial diversity associated with nests, with particular attention to bacteria and fungi involved in failed hatchings. During the 2016 and 2018 summers, 456 eggs and seven dead hatchling from six nests were collected. We performed bacteriological and mycological analyses on 88 egg samples and seven dead hatchlings, allowing us to isolate: Fusarium spp. (80.6%), Aeromonas hydrophila (55.6%), Aspergillus spp. (27.2%) …

0106 biological sciencesQH301-705.5ZygoteScienceMicrofloraZoology010603 evolutionary biology01 natural sciencesLoggerhead sea turtleMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyNesting Behaviorlaw.invention03 medical and health sciencesMediterranean seaFusariumlawSea turtle eggsMediterranean SeaAnimalsBiology (General)Internal transcribed spacerTurtle (robot)SicilyHatchling030304 developmental biologyCaretta caretta0303 health sciencesbiologyHatchingMicrobiotaQbiology.organism_classificationAeromonas hydrophilaTurtlesCitrobacter freundiiAspergillusThreatened speciesGeneral Agricultural and Biological SciencesResearch ArticleBiology Open
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Seasonal and ontogenetic variability in stomach size of Eurasian perch (Perca fluviatilis L.)

2019

Eurasian perch (Perca fluviatilis) were sampled in April, from May to June and at the end of August to test whether the current season (i.e. feeding conditions) affects the fishes’ stomach size (i.e. volume and weight). A wide range of size data were analysed to reveal the relationship between fish size (length and weight) and stomach size. No significant differences in length-specific stomach volume or stomach weight were found in fish sampled at different times of the year. However, there were differences between seasons in the size of the stomach in relation to body weight, as length-specific body weight changes during the year because of the development of gametes and changes in nutriti…

0106 biological sciencesRange (biology)OntogenyZoologyRelative weightstomach capacityAquatic ScienceBody weightstomach volume01 natural sciencesstomach weighttilavuusvatsamedicinepercidaeahvenInvertebratePerchbiology010604 marine biology & hydrobiologyStomachdigestive oral and skin physiology04 agricultural and veterinary sciencesbiology.organism_classificationmedicine.anatomical_structureVentriculus040102 fisheries0401 agriculture forestry and fisheriesAllometryAgronomy and Crop Science
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Stand out from the Crowd: Small-Scale Genetic Structuring in the Endemic Sicilian Pond Turtle

2020

The geographical pattern of genetic diversity was investigated in the endemic Sicilian pond turtle Emys trinacris across its entire distribution range, using 16 microsatellite loci. Overall, 245 specimens of E. trinacris were studied, showing high polymorphic microsatellite loci, with allele numbers ranging from 7 to 30. STRUCTURE and GENELAND analyses showed a noteworthy, geographically based structuring of the studied populations in five well-characterized clusters, supported by a moderate degree of genetic diversity (FST values between 0.075 and 0.160). Possible explanations for the genetic fragmentation observed are provided, where both natural and human-mediated habitat fragmentation o…

0106 biological sciencesRange (biology)Settore BIO/05 - ZoologiaEmydidae010603 evolutionary biology01 natural sciencesEmydidaemicrosatelliteslaw.invention03 medical and health sciencesgenetic structuringlawGenetic variabilityTurtle (robot)lcsh:QH301-705.5Sicily030304 developmental biologyNature and Landscape Conservation0303 health sciencesGenetic diversityHabitat fragmentationEcologybiologyEcologyEcological Modeling<i>Emys trinacris</i>biology.organism_classificationAgricultural and Biological Sciences (miscellaneous)lcsh:Biology (General)Emys trinacrisEmys trinacrisMicrosatelliteDiversity
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Quantifying and addressing the prevalence and bias of study designs in the environmental and social sciences

2020

Building trust in science and evidence-based decision-making depends heavily on the credibility of studies and their findings. Researchers employ many different study designs that vary in their risk of bias to evaluate the true effect of interventions or impacts. Here, we empirically quantify, on a large scale, the prevalence of different study designs and the magnitude of bias in their estimates. Randomised designs and controlled observational designs with pre-intervention sampling were used by just 23% of intervention studies in biodiversity conservation, and 36% of intervention studies in social science. We demonstrate, through pairwise within-study comparisons across 49 environmental da…

0106 biological sciencesResearch designScientific communitySCIENTIFIC COMMUNITYMedio ambiente naturalsosiaalitieteetPsychological interventionGeneral Physics and AstronomySocial SciencesQH7501 natural sciencesEnvironmental impact//purl.org/becyt/ford/1 [https]010104 statistics & probability/706/648CredibilityPrevalenceSocial scienceComputingMilieux_MISCELLANEOUSGEMultidisciplinaryEcologyQarticleSampling (statistics)Biodiversitynäyttöön perustuvat käytännötsatunnaistetut vertailukokeetENVIRONMENTAL IMPACTResearch designResearch DesignScale (social sciences)[SDE]Environmental SciencesH1ScienceEnvironment010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologySocial sciencesBiastutkimusmenetelmätQH541/704/172/4081Humans0101 mathematics//purl.org/becyt/ford/1.6 [https]ympäristötieteetpoliittinen päätöksentekoClinical study designmetodologia/706/689General Chemistry15. Life on landEcologíaLiteraturePairwise comparisonObservational study/631/158luotettavuusBias; Biodiversity; Ecology; Environment; Humans; Literature; Prevalence; Research Design; Social SciencesNature Communications
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A molecular-based identification resource for the arthropods of Finland

2022

Publisher Copyright: © 2021 The Authors. Molecular Ecology Resources published by John Wiley & Sons Ltd. To associate specimens identified by molecular characters to other biological knowledge, we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report the creation of a comprehensive reference library of DNA barcodes for the arthropods of an entire country (Finland), (2) publish this library, and (3) deliver a new identification tool for insects and spiders, as based on this resource. The reference library contains mtDNA COI barcodes for 11,275 (43%) of 26,437 arthropod species known from Finland, including 10,811 (45%) of 23,956 insect species. To quantify the…

0106 biological sciencesResource (biology)DNA barcodesspecies identificationBiodiversityreference libraryarthropodsBiologyBarcodeProbabilistic taxonomic assignment010603 evolutionary biology01 natural scienceslaw.inventionCoiCOI03 medical and health sciencessymbols.namesakeProtaxlawprobabilistic taxonomic assignmentniveljalkaisetGeneticsAnimalsDNA Barcoding TaxonomicSpecies identificationArthropodsSpecies identificationFinlandEcology Evolution Behavior and SystematicsGene Library030304 developmental biology0303 health sciencesDNA-analyysiPROTAXsystematiikka (biologia)Linnaean taxonomyReference libraryBiodiversityGeographyEvolutionary biologyDna barcodes1181 Ecology evolutionary biologysymbolsidentificationlajinmääritysIdentification (biology)Biotechnology
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Temporal fluctuations in seawater pCO2 may be as important as mean differences when determining physiological sensitivity in natural systems

2015

AbstractMost studies assessing the impacts of ocean acidification (OA) on benthic marine invertebrates have used stable mean pH/pCO2 levels to highlight variation in the physiological sensitivities in a range of taxa. However, many marine environments experience natural fluctuations in carbonate chemistry, and to date little attempt has been made to understand the effect of naturally fluctuating seawater pCO2 (pCO2sw) on the physiological capacity of organisms to maintain acid–base homeostasis. Here, for the first time, we exposed two species of sea urchin with different acid–base tolerances, Paracentrotus lividus and Arbacia lixula, to naturally fluctuating pCO2sw conditions at shallow wat…

0106 biological sciencesSea urchin010504 meteorology & atmospheric sciencesAcid-base balanceEcologyChemistry010604 marine biology & hydrobiologyOcean acidificationVolcanic ventOcean acidificationAquatic ScienceAtmospheric sciencesOceanography01 natural sciencesEcology Evolution Behavior and SystematicpCO2Natural (archaeology)OceanographyAquatic scienceSeawaterNatural variabilitySensitivity (control systems)Natural variabilityEcology Evolution Behavior and Systematics0105 earth and related environmental sciences
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The impact of ocean acidification and warming on the skeletal mechanical properties of the sea urchin Paracentrotus lividus from laboratory and field…

2015

AbstractIncreased atmospheric CO2 concentration is leading to changes in the carbonate chemistry and the temperature of the ocean. The impact of these processes on marine organisms will depend on their ability to cope with those changes, particularly the maintenance of calcium carbonate structures. Both a laboratory experiment (long-term exposure to decreased pH and increased temperature) and collections of individuals from natural environments characterized by low pH levels (individuals from intertidal pools and around a CO2 seep) were here coupled to comprehensively study the impact of near-future conditions of pH and temperature on the mechanical properties of the skeleton of the euechin…

0106 biological sciencesSea urchinIntertidal zone010501 environmental sciencesTest (biology)Aquatic ScienceOceanography01 natural sciencesParacentrotus lividuschemistry.chemical_compoundbiology.animalAquatic scienceCO2 seepSea urchinEcology Evolution Behavior and SystematicsSkeleton0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyLong-term exposureOcean acidificationOcean acidificationOcean acidification sea urchin Paracentrotus lividus mechanical properties nanoindentation skeleton CO2 vent intertidal pools long-term exposurebiology.organism_classificationEcology Evolution Behavior and SystematicOceanographychemistryCarbonateSeawaterIntertidal poolMechanical propertieParacentrotus lividu
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Effect on the Antioxidant, Lipoperoxyl Radical Scavenger Capacity, Nutritional, Sensory and Microbiological Traits of an Ovine Stretched Cheese Produ…

2021

An innovative ovine cheese enriched with red grape pomace powder (GPP) was produced to improve the functional properties of Vastedda cheese typology. Vastedda cheese making was performed adding GPP and four selected Lactococcus lactis strains (Mise36, Mise94, Mise169 and Mise190). For each strain, 40 L of pasteurized ewe’s milk was divided into two aliquots representing control and experimental trials. Control cheese (CC) production did not contain GPP, while the experimental cheese (EC) production was enriched with 1% (w/w) GPP. GPP did not slow down starter development and acid generation. Plate counts and randomly amplified polymorphic DNA (RAPD)-PCR analysis confirmed the dominance of t…

0106 biological sciencesSettore AGR/19 - Zootecnica SpecialeAntioxidantGrape pomace powderPhysiologymedicine.medical_treatmentSettore AGR/13 - Chimica AgrariaClinical BiochemistryPasteurizationLipoperoxyl radical scavenger capacity01 natural sciencesBiochemistryArticleAntioxidantslaw.invention0404 agricultural biotechnologyStarterLipid oxidationlawSettore BIO/10 - Biochimica010608 biotechnologymedicineVolatile organic compoundsFood scienceMolecular BiologyWinemakingOvine stretched cheesebiologyChemistrylcsh:RM1-950Lactococcus lactisPomacePolyphenolsfood and beverages04 agricultural and veterinary sciencesCell Biologybiology.organism_classification040401 food scienceLactococcus lactislcsh:Therapeutics. PharmacologyPolyphenolSettore AGR/16 - Microbiologia AgrariaAntioxidants
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