Search results for "acids"

showing 10 items of 3520 documents

Hepatic farnesyl diphosphate synthase expression is suppressed by polyunsaturated fatty acids

2005

Dietary vegetable oils and fish oils rich in PUFA (polyunsaturated fatty acids) exert hypocholesterolaemic and hypotriglyceridaemic effects in rodents. The plasma cholesterol-lowering properties of PUFA are due partly to a diminution of cholesterol synthesis and of the activity of the rate-limiting enzyme HMG-CoA reductase (3-hydroxy-3-methylglutaryl-CoA reductase). To better understand the mechanisms involved, we examined how tuna fish oil and individual n−3 and n−6 PUFA affect the expression of hepatic FPP synthase (farnesyl diphosphate synthase), a SREBP (sterol regulatory element-binding protein) target enzyme that is subject to negative-feedback regulation by sterols, in co-ordination …

RNA StabilityBlotting WesternDown-RegulationReductaseBiochemistryGene Expression Regulation EnzymologicMicechemistry.chemical_compoundFish OilsFarnesyl diphosphate synthaseCell Line TumorAnimalsHumansRNA MessengerPromoter Regions GeneticMolecular BiologyTriglyceridesCell Nucleuschemistry.chemical_classificationAlkyl and Aryl TransferasesbiologyTunaCholesterolalpha-Linolenic acidalpha-Linolenic Acidfood and beveragesGeranyltranstransferaseCell BiologyHydroxymethylglutaryl-CoA reductaseEicosapentaenoic acidDietRatsDNA-Binding ProteinsCholesterolLiverchemistryBiochemistryDocosahexaenoic acidCCAAT-Enhancer-Binding ProteinsFatty Acids Unsaturatedbiology.proteinHydroxymethylglutaryl CoA Reductaseslipids (amino acids peptides and proteins)Sterol Regulatory Element Binding Protein 1Sterol Regulatory Element Binding Protein 2Transcription FactorsResearch ArticlePolyunsaturated fatty acidBiochemical Journal
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An unusually high substitution rate in transplant-associated BK polyomavirus in vivo is further concentrated in HLA-C-bound viral peptides

2018

Infection with human BK polyomavirus, a small double-stranded DNA virus, potentially results in severe complications in immunocompromised patients. Here, we describe the in vivo variability and evolution of the BK polyomavirus by deep sequencing. Our data reveal the highest genomic evolutionary rate described in double-stranded DNA viruses, i.e., 10−3–10−5 substitutions per nucleotide site per year. High mutation rates in viruses allow their escape from immune surveillance and adaptation to new hosts. By combining mutational landscapes across viral genomes with in silico prediction of viral peptides, we demonstrate the presence of significantly more coding substitutions within predicted cog…

RNA viruses0301 basic medicineMutation ratePhysiologyvirusesUrinePathology and Laboratory Medicinemedicine.disease_causeBiochemistryMedicine and Health SciencesBiology (General)Amino AcidsGenome EvolutionPhylogenyData ManagementMutationOrganic CompoundsHigh-Throughput Nucleotide SequencingPhylogenetic AnalysisDNA virusGenomicsBody FluidsBK virusPhylogeneticsChemistryMedical MicrobiologyViral PathogensViral evolutionVirusesPhysical SciencesEvolutionary RatePathogensAnatomyResearch ArticleComputer and Information SciencesEvolutionary ProcessesQH301-705.5ImmunologyGenome ViralHLA-C AntigensBiologyMicrobiologyMolecular EvolutionViral EvolutionVirusDeep sequencing03 medical and health sciencesVirologyGeneticsmedicineHumansEvolutionary SystematicsMicrobial PathogensMolecular BiologyTaxonomyEvolutionary BiologyPolyomavirus InfectionsOrganic ChemistryOrganismsChemical CompoundsBiology and Life SciencesComputational BiologyProteinsOrgan TransplantationRC581-607030112 virologyVirologyOrganismal EvolutionPeptide FragmentsPolyomaviruses030104 developmental biologyAmino Acid SubstitutionBK VirusMicrobial EvolutionMutationParasitologyImmunologic diseases. AllergyDNA virusesPolyomavirus Infections
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An Experimental and Computational Study on the Effect of Al(OiPr)3 on Atom-Transfer Radical Polymerization and on the Catalyst-Dormant Chain Halogen …

2005

International audience; Compound Al(OiPr)3 is shown to catalyze the halide-exchange process leading from [Mo(Cp)Cl2(iPrN=CH-CH=NiPr)] and CH3CH(X)COOEt (X=Br, I) to the mixed-halide complexes [Mo(Cp)ClX(iPrN=CH-CH=NiPr)]. On the other hand, no significant acceleration is observed for the related exchange between [MoX3(PMe3)3] (X=Cl, I) and PhCH(Br)CH3, by analogy to a previous report dealing with the RuII complex [RuCl2(PPh3)3]. A DFT computation study, carried out on the model complexes [Mo(Cp)Cl2(PH3)2], [MoCl3(PH3)3], and [RuCl2(PH3)3], and on the model initiators CH3CH(Cl)COOCH3, CH3Cl, and CH3Br, reveals that the 16-electron RuII complex is able to coordinate the organic halide RX in a…

Radical polymerizationHalide010402 general chemistryPhotochemistry01 natural sciencesCatalysisAdductLewis acid catalysisNucleophilic substitution[CHIM.COOR]Chemical Sciences/Coordination chemistryLewis acids and bases010405 organic chemistryAtom-transfer radical-polymerizationChemistryOrganic ChemistryGeneral ChemistryHalide exchange[CHIM.CATA]Chemical Sciences/Catalysis0104 chemical sciencesLewis acid catalysis[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryCrystallography[CHIM.POLY]Chemical Sciences/PolymersDensity functional theoryDensity functional theoryHalogen atom transfer
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Conformational preferences and synthesis of isomers Z and E of oxazole-dehydrophenylalanine

2016

Dehydrophenylalanine, ΔPhe, is the most commonly studied α,β-dehydroamino acid. In nature, further modifications of the α,β-dehydroamino acids were found, for example, replacement of the C-terminal amide group by oxazole ring. The conformational properties of oxazole-dehydrophenylalanine residue (ΔPhe-Ozl), both isomers Z and E, were investigated. To determine all possible conformations, theoretical calculations were performed using Ac-(Z/E)-ΔPhe-Ozl(4-Me) model compounds at M06-2X/6-31++G(d,p) level of theory. Ac-(Z/E)-ΔPhe-Ozl-4-COOEt compounds were synthesized and the conformational preferences of each isomer, Z and E, were investigated using FTIR and NMR-NOE in solutions of increasing p…

Ramachandran diagramHantzsch reactioncis–trans isomerizationdehydroamino acidsphotoisomerizationBiopolymers
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Meat quality of commercial chickens reared in different production systems: industrial, range and organic

2020

Abstract Meat is an important part of the human diet since it provides several nutrients. However, the amount of these nutrients can differ according to several factors. With this in mind, the present research was designed with the main objective of evaluating the effect of production system of broiler chickens (industrial, range and organic) on meat quality. The physicochemical, chemical and nutritional characteristics were determined in breast and drumstick meat. The organic chickens presented the lowest amounts of fat and cholesterol and the highest amounts of protein. The colour was also influenced by the production system, where organic and range chickens had the highest values of redn…

Range (biology)3309 Tecnología de Los Alimentosmedia_common.quotation_subject010401 analytical chemistry0402 animal and dairy sciencefood and beverages04 agricultural and veterinary sciencesBiology040201 dairy & animal science01 natural sciences3104 Producción Animal0104 chemical sciences2302.90 Bioquímica de AlimentosPoultry meatQuality (business)lipids (amino acids peptides and proteins)Food scienceFood qualitymedia_common
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Detection of lactobacillic acid in low erucic rapeseed oil--A note of caution when quantifying cyclic fatty acid monomers in vegetable oils.

2010

International audience; The purpose of this work was to identify an unknown component which has been detected during the analysis of cyclic fatty acid monomers (CFAMs) in low erucic acid rapeseed oils (LEAR). A sample of crude LEAR was transformed into fatty acid methyl esters (FAMEs) and hydrogenated using PtO2. The hydrogenated sample was fractionated by reversed-phase high-performance liquid chromatography (RP-HPLC) and the fraction containing the CFAMs transformed into picolinyl esters. Analysing these picolinyl derivatives by gas-liquid chromatography coupled to mass spectrometry (GC-MS) showed that the unknown product observed in LEAR is the 11,12-methylene-octadecanoic acid. This cyc…

RapeseedFraction (chemistry)Mass spectrometry01 natural sciencesBiochemistryHigh-performance liquid chromatographyGas Chromatography-Mass SpectrometryTHERMAL DEGRADATIONFatty Acids Monounsaturated03 medical and health scienceschemistry.chemical_compoundLOW ERUCIC ACID RAPESEED OIL[SDV.IDA]Life Sciences [q-bio]/Food engineering1112-METHYLENE-OCTADECANOIC ACIDOrganic chemistryPlant Oils[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesChromatographyChemistryCYCLIC FATTY ACID MONOMERS010401 analytical chemistryOrganic ChemistryFatty AcidsFatty acidMASS-SPECTROMETRYCell BiologySunflower0104 chemical sciencesErucic acidRapeseed OilQuantitative analysis (chemistry)Chemistry and physics of lipids
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N-Glycosyl Amides as Glycosyl Donors in Stereoselective Glycosylation Reactions

2004

Due to their high stability, N-glycosyl amides have so far not been considered as glycosyl donors for glycosylation reactions. Two new procedures for the cleavage of the anomeric amide functionality under mild reaction conditions and further stereoselective in situ conversions of the activated glycosyl donors with alcohols and amines to give β-configured O- and N-glycosides are described in this article.

Reaction conditionsanimal structuresAnomerGlycosylationStereochemistryChemical glycosylationOrganic ChemistryGeneral Medicinemacromolecular substancesCleavage (embryo)Koenigs–Knorr reactionCatalysiscarbohydrates (lipids)chemistry.chemical_compoundchemistryAmidelipids (amino acids peptides and proteins)GlycosylStereoselectivityGlycosyl donorSynthesis
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Diels-Alder Reactions of 2-Azabutadienes with Aldehydes: Ab Initio and Density Functional Theoretical Study of the Reaction Mechanism, Regioselectivi…

1997

The Diels−Alder reaction of 2-azabutadiene with aldehydes has been studied using high level ab initio molecular orbital and density functional methods. Multiconfigurational calculations were carried out on the concerted and stepwise mechanisms. At the CASPT2F/6-31G*//CASSCF/6-31G* level of theory, the [π4s + π2s]-cycloaddition of 2-azabutadiene with formaldehyde is predicted to be a concerted reaction, in good agreement with the experimental evidence. The regio- and stereoselectivity of the reaction was studied at the HF/6-31G*, MP2/6-31G*, and Becke3LYP/6-31G* levels of theory. The density functional calculations appears to give a good description of the basic features of the reaction. The…

Reaction mechanismAcid catalysisChemistryConcerted reactionComputational chemistryOrganic ChemistryAb initioRegioselectivityStereoselectivityLewis acids and basesLewis acid catalysis
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Unveiling the reaction mechanism of novel copper N-alkylated tetra-azacyclophanes with outstanding superoxide dismutase activity.

2020

Quantum chemical and multiscale calculations reveal the mechanistic pathway of two superoxide dismutase mimetic N-alkylated tetra-azacyclophane copper complexes with remarkable activity. The arrangement of the binding site afforded by the bulky alkyl substituents and the coordinated water molecule as a proton source play key roles in the reaction mechanism.

Reaction mechanismAlkylationStereochemistrychemistry.chemical_elementAlkylationMolecular Dynamics SimulationCrystallography X-RayCatalysisSuperoxide dismutaseCoordination ComplexesEthers CyclicMaterials ChemistryMoleculeHumansBinding siteAlkylchemistry.chemical_classificationbiologySuperoxide DismutaseMetals and AlloysGeneral Chemistrybiology.organism_classificationCopperSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialschemistryCeramics and Compositesbiology.proteinTetraQuantum Theorylipids (amino acids peptides and proteins)CopperChemical communications (Cambridge, England)
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Synthesis, Reactivity and Theoretical Study of B3H8−and Related Derivatives

1996

Abstract Octahydrotriborate salts, B3H8 −, have been prepared by the reaction of NaBH4 with Lewis acids such as BX3·BDMA (BDMA = benzyldimethylamine, × = Cl,Br) or C2H5I in diglyme. The presence of BH3·BDMA as a by-product in the former reaction provides new insight into the reaction mechanism of B11H14 − formation. In acetonitrile-water solutions of HCl or CH3CO2H, the B3H8 − anion reacted to give B3H7CH3CN or B3H7CH3CO2 − characterized by 11B NMR spectroscopy. Their kinetic hydrolysis study was consistent with NMR analysis. Reaction of Bu4NB3H8 and CuCl2 at 0°C produced pure B3H6Cl2 −. An AM1 theoretical study of the substituted derivatives B3H7L (L = Cl−, CH3CN, CH3CO2 −, OH−) and B3H6L2…

Reaction mechanismChemistryDiglymeNuclear magnetic resonance spectroscopyRelated derivativesMedicinal chemistryIonInorganic ChemistryHydrolysischemistry.chemical_compoundOrganic chemistryReactivity (chemistry)Lewis acids and basesPhysical and Theoretical ChemistrySynthesis and Reactivity in Inorganic and Metal-Organic Chemistry
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