Search results for "adaptation"

showing 10 items of 1775 documents

Roles of adenine methylation and genetic mutations in adaptation to different temperatures in Serratia marcescens

2019

AbstractEpigenetic modifications can contribute to adaptation, but the relative contributions of genetic and epigenetic variation are unknown. Previous studies on the role of epigenetic changes in adaptation in eukaryotes have nearly exclusively focused on cytosine methylation (m5C), while prokaryotes exhibit a richer system of methyltransferases targetting adenines (m6A) or cytosines (m4C, m5C). DNA methylation in prokaryotes has many roles, but its potential role in adaptation still needs further investigation. We collected phenotypic, genetic, and epigenetic data using single molecule real-time sequencing of clones of the bacterium Serratia marcescens that had undergone experimental evol…

GeneticsRegulation of gene expressionCancer ResearchExperimental evolutionMethyltransferaseDNA methylationPhenotypic traitMethylationEpigeneticsAdaptationBiologyMolecular BiologyPhenotype
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Identification and expression of Lactobacillus paracasei genes for adaptation to desiccation and rehydration

2018

AbstractLactobacillus paracaseiis able to persist in a variety of natural and technological environments despite physico-chemical perturbations, in particular alternations between desiccation and rehydration. However, the way in which it adapts to hydric fluctuations and in particular the genetic determinants involved are not clearly understood. To identify the genes involved in adaptation to desiccation, an annotated library ofL. paracaseirandom transposon mutants was screened for viability after desiccation (25% relative humidity, 25°C). Subsequently, the expression of the identified genes was measured at five stages of the dehydration-rehydration process to formulate the chronology of ge…

GeneticsTranscriptomeLactobacillus paracaseibiologyGene expressionMutantfood and beveragesTransposon mutagenesisAdaptationbiology.organism_classificationDesiccationGene
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Some notes on the geographical distribution of the human red cell acid phosphatase phenotypes

1972

Basing on the data of 65 populations the geographical variability of the human red cell acid phosphatase phenotypes resp. alleles was studied. We found a marked distribution gradient: The frequency of pB-alleles increases with the increase of the mean annual temperature of the various biotops, whereas the pA-allele frequencies show a clear decrease. For this allele we calculated a significant negative correlation between its frequency and the mean annual temperature: r=-0.71; P<0.001. We suppose that the pB-allele is in some way adaptive under the climatic conditions of tropical biotops. The possible reasons are discussed.

GeneticsTropical ClimateErythrocytesPolymorphism GeneticGeographyRed cell acid phosphataseClimateAcid PhosphataseStatistics as TopicAdaptation BiologicalZoologyBiologySignificant negative correlationPhenotypeGenetics PopulationPhenotypeGene FrequencyGeneticsHumansMetabolic diseaseNegative correlationAlleleMolecular BiologyAllelesGenetics (clinical)Human Genetics
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Genomic conflicts and sexual antagonism in human health: Insights from oxytocin and testosterone

2015

We review the hypothesized and observed effects of two of the major forms of genomic conflicts, genomic imprinting and sexual antagonism, on human health. We focus on phenotypes mediated by peptide and steroid hormones (especially oxytocin and testosterone) because such hormones centrally mediate patterns of physical and behavioral resource allocation that underlie both forms of conflict. In early development, a suite of imprinted genes modulates the human oxytocinergic system as predicted from theory, with paternally inherited gene expression associated with higher oxytocin production, and increased solicitation to mothers by infants. This system is predicted to impact health through the i…

Geneticskinship theoryReviews and SynthesisBiologygenomic imprintingSexual dimorphismSexual conflictparental antagonismsexual conflictsexual antagonismGeneticsta1181EpigeneticsAlleleParent–offspring conflictGeneral Agricultural and Biological SciencesEvolutionary dynamicsGenomic imprintingEcology Evolution Behavior and Systematicsparent–offspring conflictMaladaptationEvolutionary Applications
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Survival relative to new and ancestral host plants, phytoplasma infection, and genetic constitution in host races of a polyphagous insect disease vec…

2014

Dissemination of vectorborne diseases depends strongly on the vector's host range and the pathogen's reservoir range. Because vectors interact with pathogens, the direction and strength of a vector's host shift is vital for understanding epidemiology and is embedded in the framework of ecological specialization. This study investigates survival in host-race evolution of a polyphagous insect disease vector, Hyalesthes obsoletus, whether survival is related to the direction of the host shift (from field bindweed to stinging nettle), the interaction with plant-specific strains of obligate vectored pathogens/symbionts (stolbur phytoplasma), and whether survival is related to genetic differentia…

Geneticsstolbur phytoplasmaEcologyObligateHost (biology)tritrophic interactionAssortative matingBiologybiology.organism_classificationmicrosatelliteshost-race evolutionRace (biology)PhytoplasmaGene–behavior interactionVector (epidemiology)Hyalesthes obsoletusPathogenEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape ConservationMaladaptationEcology and Evolution
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Genomic instability in an interspecific hybrid of the genus Saccharomyces: a matter of adaptability

2020

Ancient events of polyploidy have been linked to huge evolutionary leaps in the tree of life, while increasing evidence shows that newly established polyploids have adaptive advantages in certain stress conditions compared to their relatives with a lower ploidy. The genus Saccharomyces is a good model for studying such events, as it contains an ancient whole-genome duplication event and many sequenced Saccharomyces cerevisiae are, evolutionary speaking, newly formed polyploids. Many polyploids have unstable genomes and go through large genome erosions; however, it is still unknown what mechanisms govern this reduction. Here, we sequenced and studied the natural S. cerevisiae × Saccharomyces…

Genome instabilityNuclear geneDNA Copy Number VariationsPopulationGene DosageHybridsWineGenome instabilityadaptationSaccharomyces cerevisiaeBiologyGenomeGenomic InstabilityPolyploidy03 medical and health sciencesSaccharomycesCopy-number variationAdaptationeducation030304 developmental biologyhybridsresequencing0303 health scienceseducation.field_of_study030306 microbiologyChimeraGeneral MedicineGenomicsSequence Analysis DNAbiology.organism_classificationgenome instabilityEvolutionary biologyEpistasisPloidyMicrobial evolution and epidemiology: Mechanisms of evolutionSaccharomyces kudriavzeviiGenome FungalSaccharomyces kudriavzeviiResequencingResearch ArticleMicrobial Genomics
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Checkpoint adaptation in recombination-deficient cells drives aneuploidy and resistance to genotoxic agents.

2020

Abstract Human cancers frequently harbour mutations in DNA repair genes, rendering the use of DNA damaging agents as an effective therapeutic intervention. As therapy-resistant cells often arise, it is important to better understand the molecular pathways that drive resistance in order to facilitate the eventual targeting of such processes. We employ recombination-defective diploid yeast as a model to demonstrate that, in response to genotoxic challenges, nearly all cells eventually undergo checkpoint adaptation, resulting in the generation of aneuploid cells with whole chromosome losses that have acquired resistance to the initial genotoxic challenge. We demonstrate that adaptation inhibit…

Genome instabilitySaccharomyces cerevisiae ProteinsDNA RepairDNA repairAneuploidySaccharomyces cerevisiaeBiologyBiochemistryGenomic Instabilitychemistry.chemical_compoundGene Knockout TechniquesDrug Resistance FungalmedicineCytotoxicityMolecular BiologyRecombination GeneticSirolimusCell BiologyCell Cycle Checkpointsmedicine.diseaseAneuploidyPhenotypeDiploidyCell biologyRad52 DNA Repair and Recombination ProteinchemistryAdaptationPloidyDNADNA repair
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Genome structure reveals the diversity of mating mechanisms in Saccharomyces cerevisiae x Saccharomyces kudriavzevii hybrids, and the genomic instabi…

2020

Interspecific hybridization has played an important role in the evolution of eukaryotic organisms by favouring genetic interchange between divergent lineages to generate new phenotypic diversity involved in the adaptation to new environments. This way, hybridization between Saccharomyces species, involving the fusion between their metabolic capabilities, is a recurrent adaptive strategy in industrial environments. In the present study, whole-genome sequences of natural hybrids between Saccharomyces cerevisiae and Saccharomyces kudriavzevii were obtained to unveil the mechanisms involved in the origin and evolution of hybrids, as well as the ecological and geographic contexts in which sponta…

Genome instabilitybiologyHybridization mechanismsMechanism (biology)Rare-matingSaccharomyces cerevisiaeGenome rearrangementsHybridsGeneral MedicineSaccharomyces cerevisiaebiology.organism_classificationPhenotypeEvolutionary biologyMatingAdaptationSaccharomyces kudriavzeviiSaccharomyces kudriavzeviiHybrid
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The Role of Ancestral Duplicated Genes in Adaptation to Growth on Lactate, a Non-Fermentable Carbon Source for the Yeast Saccharomyces cerevisiae

2021

This article belongs to the Section Molecular Informatics.

GenomeInformationSystems_GENERALGene DuplicationGene Expression Regulation FungalGene duplicationComputingMilieux_COMPUTERSANDEDUCATIONPhenotypic responseRNA-SeqBiology (General)SpectroscopyGeneticsbiologyGene Expression Regulation DevelopmentalGeneral MedicineAdaptation PhysiologicalComputer Science ApplicationsChemistryMetabolic distanceWhole-genome duplicatesGenome FungalGlycolysisSmall-scale duplicatesSaccharomyces cerevisiae Proteinsphenotypic responseGeneralLiterature_INTRODUCTORYANDSURVEYQH301-705.5Saccharomyces cerevisiaesmall-scale duplicatesSaccharomyces cerevisiaeGeneralLiterature_MISCELLANEOUSArticleCatalysisEvolution MolecularInorganic ChemistryLactic AcidPhysical and Theoretical ChemistryQD1-999Molecular Biologymetabolic distanceAcidic stressacidic stressheat-shock proteinsGene Expression Profilingwhole-genome duplicatesOrganic ChemistryRobustness (evolution)biology.organism_classificationCarbonReactive oxygen responseYeastEvolvabilityGene OntologyHeat-shock proteinsAdaptationreactive oxygen responseFunctional divergenceInternational Journal of Molecular Sciences
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Genome-wide scan for selection signatures reveals novel insights into the adaptive capacity in local North African cattle

2020

International audience; Natural-driven selection is supposed to have left detectable signatures on the genome of North African cattle which are often characterized by the fixation of genetic variants associated with traits under selection pressure and/or an outstanding genetic differentiation with other populations at particular loci. Here, we investigate the population genetic structure and we provide a first outline of potential selection signatures in North African cattle using single nucleotide polymorphism genotyping data. After comparing our data to African, European and indicine cattle populations, we identified 36 genomic regions using three extended haplotype homozygosity statistic…

GenotypeEvolutionMolecular biologyQuantitative Trait Locilcsh:MedicineBreedingNorth African cattle selection signatures candidate genePolymorphism Single NucleotideArticleSettore AGR/17 - Zootecnica Generale E Miglioramento GeneticoAfrica NorthernGene FrequencyGeneticsAnimalsSelection Geneticlcsh:ScienceWhole Genome Sequencinglcsh:RGenomicsAdaptation Physiological[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics PopulationPhenotypeHaplotypeslcsh:QCattleGenome-Wide Association Study
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