Search results for "armo"
showing 10 items of 1364 documents
Insertion and Topology of a Plant Viral Movement Protein in the Endoplasmic Reticulum Membrane
2002
Virus-encoded movement proteins (MPs) mediate cell-to-cell spread of viral RNA through plant membranous intercellular connections, the plasmodesmata. The molecular pathway by which MPs interact with viral genomes and target plasmodesmata channels is largely unknown. The 9-kDa MP from carnation mottle carmovirus (CarMV) contains two potential transmembrane domains. To explore the possibility that this protein is in fact an intrinsic membrane protein, we have investigated its insertion into the endoplasmic reticulum membrane. By using in vitro translation in the presence of dog pancreas microsomes, we demonstrate that CarMV p9 inserts into the endoplasmic reticulum without the aid of any addi…
Double-spanning Plant Viral Movement Protein Integration into the Endoplasmic Reticulum Membrane Is Signal Recognition Particle-dependent, Translocon…
2005
The current model for cell-to-cell movement of plant viruses holds that transport requires virus-encoded movement proteins that intimately associate with endoplasmic reticulum membranes. We have examined the early stages of the integration into endoplasmic reticulum membranes of a double-spanning viral movement protein using photocross-linking. We have discovered that this process is cotranslational and proceeds in a signal recognition particle-dependent manner. In addition, nascent chain photocross-linking to Sec61alpha and translocating chain-associated membrane protein reveal that viral membrane protein insertion takes place via the translocon, as with most eukaryotic membrane proteins, …
Non-supersymmetric Extremal Black Holes: First-Order Flows and Stabilisation Equations
2013
We review the results of [1, 2] on reducing the second-order equations of motion for stationary extremal black holes in four-dimensional \({\textit{N}}\,=\,2\) supergravity to first-order flow equations and further to non-differential stabilisation equations.
Profiling the physiological and molecular response to sulfonamidic drag in Procambarus clarkii
2014
Sulfamethoxazole (SMZ) is one of the most widely employed sulfonamides. Because of the widespread use of SMZ, a considerable amount is indeed expected to be introduced into the environment. The cytotoxicity of SMZ relies mainly on arylhydroxylamine metabolites (S-NOH) of SMZ and it is associated with the production of reactive oxygen species (ROS). There is limited information about the toxic potential of SMZ at the cellular and molecular levels, especially in aquatic and/or non-target organisms. In the present study, the red swamp crayfish (Procambarus clarkii), being tolerant to extreme environmental conditions and resistant to disease, was used as a model organism to profile the molecula…
Equation-of-motion coupled-cluster methods for ionized states with an approximate treatment of triple excitations.
2005
The accuracy of geometries and harmonic vibrational frequencies is evaluated for two equation-of-motion ionization potential coupled-cluster methods including CC3 and CCSDT-3 triples corrections. The first two Sigma states and first Pi state of the N2 +, CO+, CN, and BO diatomic radicals are studied. The calculations show a tendency for the CC3 variant to overestimate the bond lengths and to underestimate the vibrational frequencies, while the CCSDT-3 variant seems to be more reliable. It is also demonstrated that the accuracy of such methods is comparable to sophisticated traditional multireference approaches and the full configuration interaction method.
Alternative single-reference coupled cluster approaches for multireference problems: the simpler, the better.
2011
We report a general implementation of alternative formulations of single-reference coupled cluster theory (extended, unitary, and variational) with arbitrary-order truncation of the cluster operator. These methods are applied to compute the energy of Ne and the equilibrium properties of HF and C(2). Potential energy curves for the dissociation of HF and the BeH(2) model computed with the extended, variational, and unitary coupled cluster approaches are compared to those obtained from the multireference coupled cluster approach of Mukherjee et al. [J. Chem. Phys. 110, 6171 (1999)] and the internally contracted multireference coupled cluster approach [F. A. Evangelista and J. Gauss, J. Chem. …
Driven Bose-Hubbard Model with a Parametrically Modulated Harmonic Trap
2016
We investigate a one-dimensional Bose–Hubbard model in a parametrically driven global harmonic trap. The delicate interplay of both the local interaction of the atoms in the lattice and the driving of the global trap allows us to control the dynamical stability of the trapped quantum many-body state. The impact of the atomic interaction on the dynamical stability of the driven quantum many-body state is revealed in the regime of weak interaction by analyzing a discretized Gross–Pitaevskii equation within a Gaussian variational ansatz, yielding a Mathieu equation for the condensate width. The parametric resonance condition is shown to be modified by the atom interaction strength. In particul…
Fundamental solutions for general anisotropic multi-field materials based on spherical harmonics expansions
2016
Abstract A unified method to evaluate the fundamental solutions for generally anisotropic multi-field materials is presented. Based on the relation between the Rayleigh expansion and the three-dimensional Fourier representation of a homogenous partial differential operator, the proposed technique allows to obtain the fundamental solutions and their derivatives up to the desired order as convergent series of spherical harmonics. For a given material, the coefficients of the series are computed only once, and the derivatives of the fundamental solutions are obtained without any term-by-term differentiation, making the proposed approach attractive for boundary integral formulations and efficie…
Subharmonic and homoclinic bifurcations in the driven and damped sine-Gordon system
1999
Abstract Chaotic responses induced by an applied biharmonic driven signal on the sine-Gordon (sG) system influenced by a constant dc-driven and the damping fields are investigated using a collective coordinate approach for the motion of the breather in the system. For this biharmonic signal, one term has a large amplitude at low frequency. Thus, the classical Melnikov method does not apply to such a system; however, we use the modified version of the Melnikov method to homoclinic bifurcations of the perturbed sG system. Additionally resonant breathers are studied using the modified subharmonic Melnikov theory. This dynamic behavior is illustrated by some numerical computations.
A COMPARATIVE STUDY BETWEEN ´ BIHARMONIC BEZIER SURFACES AND BIHARMONIC EXTREMAL SURFACES
2009
AbstractGiven a prescribed boundary of a Bezier surface, we compare the Bezier surfaces generated by two different methods, i.e., the Bezier surface minimising the biharmonic functional and the unique Bezier surface solution of the biharmonic equation with prescribed boundary. Although often the two types of surfaces look visually the same, we show that they are indeed different. In this paper, we provide a theoretical argument showing why the two types of surfaces are not always the same.