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showing 10 items of 29275 documents

Frequency and density-dependent selection on life-history strategies--a field experiment.

2008

Negative frequency-dependence, which favors rare genotypes, promotes the maintenance of genetic variability and is of interest as a potential explanation for genetic differentiation. Density-dependent selection may also promote cyclic changes in frequencies of genotypes. Here we show evidence for both density-dependent and negative frequency-dependent selection on opposite life-history tactics (low or high reproductive effort, RE) in the bank vole (Myodes glareolus). Density-dependent selection was evident among the females with low RE, which were especially favored in low densities. Instead, both negative frequency-dependent and density-dependent selection were shown in females with high R…

0106 biological sciencesGenotypelcsh:MedicinePopulation geneticsEvolutionary Biology/Evolutionary EcologyBiology010603 evolutionary biology01 natural sciencesLife history theoryGene FrequencyGenetic variationEcology/Evolutionary EcologyHumansGenetic variabilitySelection Geneticlcsh:ScienceAllele frequencySelection (genetic algorithm)Population DensityMultidisciplinaryNatural selectionEvolutionary Biology/Animal Behaviorlcsh:RGenetic Variation010601 ecologyGenetics PopulationEcology/Population EcologyEvolutionary biologyPopulation cyclelcsh:QFemaleResearch ArticlePloS one
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Wild

2021

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0106 biological sciencesGermplasmPhytochemistryTPCC total phenolic contentElderberry flowerISSR inter-simple sequence repeatElderberry fruitIC50 the half maximal inhibitory concentrationBerrySambucus nigra01 natural sciencesArticleTFC total flavonoid contentDW dry weightSARS-CoV2 severe acute respiratory syndrome coronavirus 2Rutinchemistry.chemical_compoundBotanyELISA enzyme linked immunosorbent assayCultivarAntiviralComputingMethodologies_COMPUTERGRAPHICSGenetic diversityACE2 angiotensin converting enzyme 2biology010405 organic chemistryPVPP polyvinylpyrrolidoneSambucus nigra L.biology.organism_classification0104 chemical scienceschemistryHPLC high-performance liquid chromatographyTEAC trolox equivalent anti-radical capacityGene poolAgronomy and Crop Science010606 plant biology & botanyBinding domainIndustrial crops and products
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Genomic variation in tomato, from wild ancestors to contemporary breeding accessions

2015

[EN] Background: Domestication modifies the genomic variation of species. Quantifying this variation provides insights into the domestication process, facilitates the management of resources used by breeders and germplasm centers, and enables the design of experiments to associate traits with genes. We described and analyzed the genetic diversity of 1,008 tomato accessions including Solanum lycopersicum var. lycopersicum (SLL), S. lycopersicum var. cerasiforme (SLC), and S. pimpinellifolium (SP) that were genotyped using 7,720 SNPs. Additionally, we explored the allelic frequency of six loci affecting fruit weight and shape to infer patterns of selection. Results: Our results revealed a pat…

0106 biological sciencesGermplasm[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesBreeding01 natural sciencesNucleotide diversityDomesticationtomatefréquence des allèlespérouGene FrequencyCherry tomatoequateurSolanum lycopersicumexpression du génomeFruit size genes2. Zero hungerGenetics0303 health sciencesVegetal BiologyGenomebiologytaille du fruitfood and beveragesGenomicsSolanum lycopersicum;Solanum pimpinellifolium;SolCAP array;Origin;Variability;Genome;Fruit size genes;DomesticationSolanum pimpinellifoliumAgricultural sciencesSolCAP arrayGenome PlantResearch ArticleBiotechnologyHeterozygotePolymorphism Single NucleotideEvolution Molecular03 medical and health sciencesOriginGeneticsvariabilité génomique[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAlleleGenomesVariabilityDomestication030304 developmental biologyGenetic diversityfungiSolanum pimpinellifoliumbiology.organism_classificationFruitaGENETICAFruitSolanumSciences agricolesBiologie végétale010606 plant biology & botanyamélioration des plantes
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Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis,…

2019

[Background] Monogenean flatworms are the main fish ectoparasites inflicting serious economic losses in aquaculture. The polyopisthocotylean Sparicotyle chrysophrii parasitizes the gills of gilthead sea bream (GSB, Sparus aurata) causing anaemia, lamellae fusion and sloughing of epithelial cells, with the consequent hypoxia, emaciation, lethargy and mortality. Currently no preventive or curative measures against this disease exist and therefore information on the host-parasite interaction is crucial to find mitigation solutions for sparicotylosis. The knowledge about gene regulation in monogenean-host models mostly comes from freshwater monopysthocotyleans and almost nothing is known about …

0106 biological sciencesGillGillsApoptosis01 natural sciencesTranscriptomeSparus aurataGene expression0303 health sciencesHigh-Throughput Nucleotide Sequencingmedicine.anatomical_structureLiverHelminthiasis AnimalMonogeneaBiotechnologyResearch ArticleFish Proteinsanimal structureslcsh:QH426-470lcsh:BiotechnologyFisheriesSpleenBiologyMicrobiologyHost-Parasite Interactions03 medical and health sciencesImmune systemIllumina RNA-seqImmunitylcsh:TP248.13-248.65GeneticsmedicineAutophagyAnimals14. Life underwaterPlatelet activationImmune responseTranscriptomics030304 developmental biologyCell ProliferationSequence Analysis RNASparus aurata Sparicotyle chrysophrii Gills Monogenea Ectoparasites Illumina RNA-seq Transcriptomics Apoptosis Immune responseGene Expression ProfilingAquatic animalSea Breamlcsh:GeneticsGene Expression RegulationPlatyhelminthsSparicotyle chrysophriiEctoparasitesSpleen010606 plant biology & botany
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Harvest Pressure on Coastal Atlantic Cod (Gadus morhua) from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data

2016

- Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua) is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15–93 cm) were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500) and low-reward tags (NOK 50) were used in this study. Because some harvested fish (even those posting h…

0106 biological sciencesGillsRange (biology)Respiratory Systemlcsh:MedicineMarine and Aquatic Sciences01 natural sciencesVDP::Landbruks- og fiskerifag: 900::Fiskerifag: 920::Fangst: 925Commercial fishingGeographical LocationsRecreational fishingTheoretical EcologyMedicine and Health SciencesGadusMarine FishAnimal Anatomylcsh:ScienceMultidisciplinarybiologyEcologyEcologyNorwayFishesAgricultureHabitatsEuropeGeographyHabitatVertebratesAnatomyResearch ArticleDeath RatesFish BiologyFishingFisheriesMarine Biology010603 evolutionary biologyPopulation MetricsAnimalsRecreationDemographyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life Sciencesbiology.organism_classificationFisheryAquatic Respiratory AnatomyPeople and PlacesEarth Scienceslcsh:QVDP::Agriculture and fisheries science: 900::Fisheries science: 920::Catch: 925Atlantic codZoologyPLoS ONE
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Interspecies interactions mediated by conductive minerals in the sediments of the iron rich meromictic Lake La Cruz, Spain

2019

espanolLa laguna de La Cruz puede considerarse como un analogo biogeoquimico de los ambientes marinos en la Tierra primitiva, porque su columna de agua, muy escasa en sulfato pero rica en metano y hierro, presenta condiciones similares a estos ambientes en el Precambrico. En este ambiente encontramos que particulas conductivas establecen un acoplamiento metabolico entre clados microbianos electroactivos. Demostraremos que el sedimento anoxico de la laguna de La Cruz, rico en minerales de hierro biogeoquimicamente “reactivos”, alberga conocidas especies electroactivas tales como Geobacter y Methanothrix, ademas de otros grupos microbianos que no han sido previamente asociados con un estilo d…

0106 biological sciencesGranular activated carbonMineral mediated syntrophyEcologyGranular activated carbonChemistry010604 marine biology & hydrobiologyDirect interspecies electron transferAquatic Science01 natural sciencesMethanothrixMagnetiteYoungiibacterEnvironmental chemistryConductive particlesYoungiibacterGeobacterIron meromictic lakeWater Science and Technology
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Ionizing radiation from Chernobyl affects development of wild carrot plants.

2016

AbstractRadioactivity released from disasters like Chernobyl and Fukushima is a global hazard and a threat to exposed biota. To minimize the deleterious effects of stressors organisms adopt various strategies. Plants, for example, may delay germination or stay dormant during stressful periods. However, an intense stress may halt germination or heavily affect various developmental stages and select for life history changes. Here, we test for the consequence of exposure to ionizing radiation on plant development. We conducted a common garden experiment in an uncontaminated greenhouse using 660 seeds originating from 33 wild carrots (Daucus carota) collected near the Chernobyl nuclear power pl…

0106 biological sciencesGreenhouseseed germinationradiation exposureGerminationChernobyl Nuclear Accident010603 evolutionary biology01 natural sciencesArticleIonizing radiationChernobylRadiation IonizingBotanyOrders of magnitude (radiation)wild carrots2. Zero hungerMultidisciplinarybiologyfood and beveragesBiotabiology.organism_classificationSpatial heterogeneityDaucus carotaHorticultureChernobyl Nuclear Accident13. Climate actionGerminationSeedsta1181010606 plant biology & botanyDaucus carotaScientific reports
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Antibiotics accelerate growth at the expense of immunity

2021

Antibiotics have long been used in the raising of animals for agricultural, industrial or laboratory use. The use of subtherapeutic doses in diets of terrestrial and aquatic animals to promote growth is common and highly debated. Despite their vast application in animal husbandry, knowledge about the mechanisms behind growth promotion is minimal, particularly at the molecular level. Evidence from evolutionary research shows that immunocompetence is resource-limited, and hence expected to trade off with other resource-demanding processes, such as growth. Here, we ask if accelerated growth caused by antibiotics can be explained by genome-wide trade-offs between growth and costly immunocompete…

0106 biological sciencesHOSTAntibioticsINSECTSDIVERSITYmicrobiomeMothsTrade-offkarjanhoito01 natural sciencesantibioticsimmunologiaINFECTIONgeeniekspressioLife History TraitsResearch ArticlesGeneral Environmental ScienceBODY-SIZE2. Zero hunger0303 health sciencesantibiootitTRADE-OFFSGeneral MedicineAnimal husbandryBiological EvolutionLEPIDOPTERAAccelerated GrowthAnti-Bacterial AgentsWARNING COLORATIONimmuunijärjestelmäLarvaeläimetBACTERIAImmunocompetenceGeneral Agricultural and Biological SciencesRNA-interferenssimedicine.drug_classjalostusZoologykotieläintuotantoBiology010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesImmune systemgrowth promotionImmunityPARASEMIAmedicineAnimalsMicrobiomeimmunity trade-off1172 Environmental sciences030304 developmental biologygeenitGeneral Immunology and MicrobiologyGenetics and Genomicsmikrobisto3111 Biomedicine
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

2015

Background The whitefly Bemisia tabaci is an important agricultural pest with global distribution. This phloem-sap feeder harbors a primary symbiont, “Candidatus Portiera aleyrodidarum”, which compensates for the deficient nutritional composition of its food sources, and a variety of secondary symbionts. Interestingly, all of these secondary symbionts are found in co-localization with the primary symbiont within the same bacteriocytes, which should favor the evolution of strong interactions between symbionts. Results In this paper, we analyzed the genome sequences of the primary symbiont Portiera and of the secondary symbiont Hamiltonella in the B. tabaci Mediterranean (MED) species in orde…

0106 biological sciencesHamiltonellaCandidatus Portiera aleyrodidarum[SDV]Life Sciences [q-bio]Molecular Sequence DataWhiteflyPortiera010603 evolutionary biology01 natural sciencesGenomeHemiptera03 medical and health sciencesMetabolic complementationSymbiosisEnterobacteriaceaeBotanyGeneticsAnimalsAmino AcidsSymbiosisIn Situ Hybridization Fluorescence030304 developmental biology2. Zero hungerGenetics0303 health sciencesEndosymbiontGenomebiologyfungifood and beveragesHigh-Throughput Nucleotide SequencingDNASequence Analysis DNAVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationEnterobacteriaceaeHemipteraWhiteflyComplementationHalomonadaceaeGlobal distribution[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Genome BacterialMetabolic Networks and PathwaysBiotechnologyResearch ArticleBMC Genomics
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Impact of Pressurized Liquid Extraction and pH on Protein Yield, Changes in Molecular Size Distribution and Antioxidant Compounds Recovery from Spiru…

2021

The research aims to extract nutrients and bioactive compounds from spirulina using a non-toxic, environmentally friendly and efficient method—Pressurized Liquid Extraction (PLE). In this work, Response Surface Methodology (RSM)–Central Composite Design (CCD) was used to evaluate and optimize the extraction time (5–15 min), temperature (20–60 °C) and pH (4–10) during PLE extraction (103.4 bars). The multi-factor optimization results of the RSM-CCD showed that under the pressure of 103.4 bars, the optimal conditions to recover the highest content of bioactive compounds were 10 min, 40 °C and pH 4. Furthermore, the compounds and antioxidant capacity of PLE and non-pressurized extraction extra…

0106 biological sciencesHealth (social science)AntioxidantPLEmedicine.medical_treatmentTP1-1185Plant Science01 natural sciencesHealth Professions (miscellaneous)MicrobiologyArticleCinnamic acidchemistry.chemical_compoundTriple TOF–LC–MS–MS0404 agricultural biotechnology010608 biotechnologymedicineResponse surface methodologySodium dodecyl sulfatePolyacrylamide gel electrophoresisCarotenoidRSM-CCDchemistry.chemical_classificationbioactive compoundsChromatographyChemical technologymicroalgaeExtraction (chemistry)04 agricultural and veterinary sciences040401 food science6. Clean waterchemistryPolyphenolSDS-PAGEFood ScienceFoods
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