Search results for "bacteri"

showing 10 items of 5466 documents

The mitochondrial genome of Schizosaccharomyces pombe. Stimulation of intra-chromosomal recombination in Escherichia coli by the gene product of the …

1991

The open reading frame of the first intron of the mitochondrial cox1 gene (cox1I1) was expressed in Escherichia coli. The putative intron-encoded protein stimulated the formation of intra-chromosomal lac +-recombinants about threefold. No stimulation was found when the reading frame was inserted in the opposite direction, or when it was interrupted by a deletion. The intronic open reading frame did not complement recA − or recB − mutants of E. coli. In S. pombe, elimination of this intron did not abolish homologous recombination in mitochondria. A possible role of the recombinase activity in yeast mitochondria will be discussed.

RNA SplicingGenes FungalMolecular Sequence DataSaccharomyces cerevisiaeBiologymedicine.disease_causeDNA MitochondrialElectron Transport Complex IVFungal ProteinsRecombinasesOpen Reading FramesSequence Homology Nucleic AcidEndoribonucleasesSchizosaccharomycesGeneticsmedicineRecombinaseEscherichia coliAmino Acid SequenceDNA FungalEscherichia coliRecBCDRecombination GeneticRecombinase activityBase SequenceIntegrasesIntronGeneral Medicinebiology.organism_classificationMolecular biologyNucleotidyltransferasesIntronsOpen reading frameSchizosaccharomyces pombeDNA NucleotidyltransferasesbacteriaHomologous recombination
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Human norovirus binding to select bacteria representative of the human gut microbiota

2016

Recent reports describe the ability of select bacterial strains to bind human norovirus, although the specificity of such interactions is unknown. The purpose of this work was to determine if a select group of bacterial species representative of human gut microbiota bind to human norovirus, and if so, to characterize the intensity and location of that binding. The bacteria screened included naturally occurring strains isolated from human stool (Klebsiella spp., Citrobacter spp., Bacillus spp., Enterococcus faecium and Hafnia alvei) and select reference strains (Staphylococcus aureus and Enterobacter cloacae). Binding in PBS was evaluated to three human norovirus strains (GII.4 New Orleans 2…

RNA viruses0301 basic medicinePhysiologyvirusesEnterococcus faeciumFimbrialcsh:MedicineBacillusPathology and Laboratory Medicinemedicine.disease_causePilusFecesBinding AnalysisCitrobacterKlebsiellaMedicine and Health SciencesElectron Microscopylcsh:ScienceCitrobacterMicroscopyMultidisciplinarybiologyChemistryBody FluidsBloodMedical MicrobiologyViral PathogensVirusesAnaerobic bacteriaPathogensAnatomyCell Binding AssayResearch ArticleCell BindingStaphylococcus aureusCell PhysiologyAnaerobic BacteriaResearch and Analysis MethodsMicrobiologyCalicivirusesMicrobiology03 medical and health sciencesEnterobacter cloacaemedicineHumansMicrobial PathogensChemical CharacterizationBiology and life sciencesBacteriaNoroviruslcsh:ROrganismsHafnia alveiCell Biologybiology.organism_classificationCulture MediaGastrointestinal Microbiome030104 developmental biologyFimbriae BacterialNorovirusMicrobial InteractionsTransmission Electron Microscopylcsh:QEnterobacter cloacaeBacteriaEnterococcus faeciumPLOS ONE
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Impact of probiotic Saccharomyces boulardii on the gut microbiome composition in HIV-treated patients: A double-blind, randomised, placebo-controlled…

2017

Dysbalance in gut microbiota has been linked to increased microbial translocation, leading to chronic inflammation in HIV-patients, even under effective HAART. Moreover, microbial translocation is associated with insufficient reconstitution of CD4+T cells, and contributes to the pathogenesis of immunologic non-response. In a double-blind, randomised, placebo-controlled trial, we recently showed that, compared to placebo, 12 weeks treatment with probiotic Saccharomyces boulardii significantly reduced plasma levels of bacterial translocation (Lipopolysaccharide-binding protein or LBP) and systemic inflammation (IL-6) in 44 HIV virologically suppressed patients, half of whom (n = 22) had immun…

RNA virusesMale0301 basic medicinePlacebo-controlled studylcsh:MedicineHIV InfectionsGut floraPathology and Laboratory MedicineSystemic inflammationlaw.inventionPlacebosProbiotic0302 clinical medicineImmunodeficiency ViruseslawMedicine and Health SciencesMedicinelcsh:ScienceImmune ResponseMultidisciplinarybiologyMicrobiotaGenomicsMiddle AgedProbiòticsBacterial PathogensIntestinesSaccharomyces boulardiiMedical MicrobiologyViral PathogensVirusesFemale030211 gastroenterology & hepatologyPathogensmedicine.symptomResearch ArticleSaccharomyces boulardiiAdultImmunologyMicrobial GenomicsMicrobiologySaccharomyces03 medical and health sciencesSigns and SymptomsImmune systemDouble-Blind MethodDiagnostic MedicineRetrovirusesGeneticsVIH (Virus)HumansMicrobiomeMicrobial PathogensInflammationClostridiumBacteriabusiness.industryProbioticsGut BacteriaLentivirusLachnospiraceaelcsh:ROrganismsFungiBiology and Life SciencesHIVbiology.organism_classificationYeast030104 developmental biologyImmunologylcsh:QMicrobiomebusinessPLoS ONE
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Risk factors for gastroenteritis associated with canal swimming in two cities in the Netherlands during the summer of 2015: A prospective study

2017

Urban canal swimming events are popular in the Netherlands. In 2015, two city canal swimming events took place, in Utrecht (Utrecht Singel Swim, USS) and in Amsterdam (Amsterdam City Swim, ACS). This prospective study characterizes the health risks associated with swimming in urban waters. Online questionnaires were sent to 160 (USS) and 2,692 (ACS) participants, with relatives of participants who did not swim completing the questionnaire as a control. Swimming water specimens and stool specimens of diarrheic participants in the ACS group were analysed. A total of 49% of USS and 51% of ACS swimmers returned their questionnaires. Nine percent of USS swimmers and 4% of non-swimmers reported g…

RNA virusesQuestionnaires0301 basic medicineMalePediatricsPhysiologyWater contaminationlcsh:MedicineFresh WaterPathology and Laboratory Medicinemedicine.disease_causeDisease OutbreaksFecesRisk FactorsSurveys and QuestionnairesWater QualityEpidemiologyMedicine and Health SciencesProspective StudiesProspective cohort studylcsh:ScienceCaliciviridae InfectionsNetherlandsMultidisciplinarySewageEnterobacteriaceae InfectionsMiddle AgedBacterial PathogensGastroenteritisMedical MicrobiologyResearch DesignViral PathogensVirusesEngineering and TechnologyFemalePathogensAnatomyWater MicrobiologyResearch ArticleAdultmedicine.medical_specialtyEnvironmental EngineeringAdolescent030106 microbiologyResearch and Analysis MethodsMicrobiologyCaliciviruses03 medical and health sciencesYoung AdultEnterobacteriaceaeSurface WaterEnvironmental healthmedicineHumansMicrobial PathogensSwimmingSurvey ResearchBacteriaBiological Locomotionbusiness.industryNorovirusWater Pollutionlcsh:ROrganismsBiology and Life SciencesOutbreakGastrointestinal TractEarth SciencesNoroviruslcsh:QHydrologybusinessDigestive SystemEnterococcus
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The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu

2014

Dnmt2 enzymes are conserved in eukaryotes, where they methylate C38 of tRNA-Asp with high activity. Here, the activity of one of the very few prokaryotic Dnmt2 homologs from Geobacter species (GsDnmt2) was investigated. GsDnmt2 was observed to methylate tRNA-Asp from flies and mice. Unexpectedly, it had only a weak activity toward its matching Geobacter tRNA-Asp, but methylated Geobacter tRNA-Glu with good activity. In agreement with this result, we show that tRNA-Glu is methylated in Geobacter while the methylation is absent in tRNA-Asp. The activities of Dnmt2 enzymes from Homo sapiens, Drosophila melanogaster, Schizosaccharomyces pombe and Dictyostelium discoideum for methylation of the …

RNA Transfer AsptRNA MethyltransferasesMethyltransferasebiologyNucleic Acid EnzymesRNAMethylationbiology.organism_classificationMethylationDictyostelium discoideumRNA Transfer GluSubstrate SpecificityMiceBiochemistryBacterial ProteinsTransfer RNASchizosaccharomyces pombeGeneticsAnimalsHumansNucleic Acid ConformationGeobacterGeobacter sulfurreducensGeobacterNucleic Acids Research
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Survival of Listeria monocytogenes in Soil Requires AgrA-Mediated Regulation

2015

ABSTRACT In a recent paper, we demonstrated that inactivation of the Agr system affects the patterns of survival of Listeria monocytogenes (A.-L. Vivant, D. Garmyn, L. Gal, and P. Piveteau, Front Cell Infect Microbiol 4:160, http://dx.doi.org/10.3389/fcimb.2014.00160 ). In this study, we investigated whether the Agr-mediated response is triggered during adaptation in soil, and we compared survival patterns in a set of 10 soils. The fate of the parental strain L. monocytogenes L9 (a rifampin-resistant mutant of L. monocytogenes EGD-e) and that of a Δ agrA deletion mutant were compared in a collection of 10 soil microcosms. The Δ agrA mutant displayed significantly reduced survival in these b…

RNA UntranslatedTranscription GeneticSurvivalMutantPopulationDynamicATP-binding cassette transporterBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studymedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologyTranscriptome03 medical and health sciencesSoilListeria monocytogenesBacterial Proteins[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomymedicineEnvironmental MicrobiologyGeneSoil Microbiology030304 developmental biology2. Zero hunger0303 health sciencesMicrobial ViabilityEcology[ SDV ] Life Sciences [q-bio]030306 microbiologyGene Expression ProfilingWild typeGene Expression Regulation BacterialListeria MonocytogenesResponse regulator[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyTranscriptomeSoil microbiologyGene DeletionFood ScienceBiotechnologyTranscription Factors
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Cytotoxicity, antibacterial and physicochemical properties of a new epoxy resin-based endodontic sealer containing calcium hydroxide

2019

Background This study evaluated the cytotoxicity, antibacterial and physicochemical properties of a new epoxy resin-based endodontic sealer containing calcium-hydroxide Sealer Plus. AH Plus was used as a reference for comparison. Material and Methods Cytotoxicity evaluation was performed according to ISO-10993-5 specifications using MTT assay to check the 3T3 cells viability at 1- to 4-week periods. Antibacterial activity was evaluated using a direct contact test against Enterococcus faecalis. Radiopacity, solubility and flow evaluations were performed according to ISO-6876/2012 specifications. Setting time was assessed following the ANSI/ADA-standard-n.57. The pH level was measured at 3,24…

Radiodensity0206 medical engineering02 engineering and technologyEnterococcus faecalisOperative Dentistry and Endodontics03 medical and health scienceschemistry.chemical_compound0302 clinical medicineMTT assayCytotoxicityGeneral DentistryRoot Canal ObturationCalcium hydroxidebiologyChemistryResearch030206 dentistryEpoxybiology.organism_classification:CIENCIAS MÉDICAS [UNESCO]020601 biomedical engineeringvisual_artOBTURAÇÃO DO CANAL RADICULARUNESCO::CIENCIAS MÉDICASvisual_art.visual_art_mediumAntibacterial activityNuclear chemistry
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Survival ofRalstonia solanacearum Biovar 2 in River Water: Influence of Water Microbiota

2008

Ralstonia solanacearumbiologyBiovarBacterial wiltBotanybiology.organism_classificationMicrocosmRiver water
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Discrimination between effects induced by microbial activity and water-rock interactions under hydrothermal conditions according to REE behaviour

2013

AbstractRare earth elements (REE) were investigated in siliceous stromatolites forming in the Specchio di Venere Lake on Pantelleria Island. Chondrite-normalised patterns show significant La enrichments and Eu depletions suggesting that fluids involved in stromatolite growth experienced strong rock-water interactions under hydrothermal conditions. At the same time, enrichments in heavy REE (HREE) with respect to intermediate REE (MREE) suggest that hydrothermal fluids interacted with microbial mats during deposition of the stromatolites. The above-mentioned features suggest that rock-water interactions and bacterial activity were simultaneously recorded in the REE patterns of stromatolites,…

Rare Earth ElementsbiologyRock-water interactionsStromatolites; Rare Earth Elements; Bacterial activity; Rock-water interactions Hydrothermal systemRare earthGeochemistryMineralogyEarth and Planetary Sciences(all)General Medicinebiology.organism_classificationHydrothermal circulationStromatoliteRare Earth ElementHydrothermal systemDeposition (aerosol physics)StromatolitesStromatoliteBacterial activityRock-water interactions Hydrothermal systemMicrobial matBacterial activityGeology
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Yeast-derived virus-like particles as components of novel vaccine prototypes

2013

Elektroniskā versija nesatur pielikumus

RaugibacteriophageVLPHBVBioloģijabateriofāgiBiologyYeast
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