Search results for "bacteri"

showing 10 items of 5466 documents

Functional genomics of Lactobacillus casei establishment in the gut

2014

International audience; Although the composition of the gut microbiota and its symbiotic contribution to key host physiological functions are well established, little is known as yet about the bacterial factors that account for this symbiosis. We selected Lactobacillus casei as a model microorganism to proceed to genomewide identification of the functions required for a symbiont to establish colonization in the gut. As a result of our recent development of a transposon-mutagenesis tool that overcomes the barrier that had prevented L. casei random mutagenesis, we developed a signature-tagged mutagenesis approach combining whole-genome reverse genetics using a set of tagged transposons and in…

Transposable elementLactobacillus caseiMESH: MutationMutagenesis (molecular biology technique)MESH: RabbitsGenomicsBiologyMESH: Genome BacterialGenomedigestive system03 medical and health sciencesIleumLactic acid bacteriaAnimalsMESH: AnimalsGene030304 developmental biologyMESH: MutagenesisGenetics0303 health sciencesMultidisciplinaryMESH: Lactobacillus casei030306 microbiologyMESH: Genomicsdigestive oral and skin physiologyfood and beveragesGenomicsbiology.organism_classificationReverse geneticsCommensalismLacticaseibacillus caseiPNAS PlusMutagenesisMESH: IleumMutationMESH: Genome-Wide Association StudybacteriaRabbitsFunctional genomics[SDV.AEN]Life Sciences [q-bio]/Food and NutritionGenome BacterialGenome-Wide Association Study
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Development of an Efficient In Vivo System (P-junc-TpaseIS(1223)) for Random Transposon Mutagenesis of Lactobacillus casei

2012

ABSTRACT The random transposon mutagenesis system P junc -TpaseIS 1223 is composed of plasmids pVI129, expressing IS 1223 transposase, and pVI110, a suicide transposon plasmid carrying the P junc sequence, the substrate of the IS 1223 transposase. This system is particularly efficient in Lactobacillus casei , as more than 10,000 stable, random mutants were routinely obtained via electroporation.

Transposable element[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesTn3 transposonLactobacillus casei[SDV]Life Sciences [q-bio]TransposasesVECTORGenetics and Molecular BiologyDELBRUECKII SUBSP BULGARICUSApplied Microbiology and BiotechnologyBACILLUS-SUBTILIS03 medical and health sciencesPlasmidEscherichia coliSTREPTOCOCCUS[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciencesTransposaseDNA Primers030304 developmental biologyGenetics0303 health sciencesEcologybiologyRandom030306 microbiologyINSERTION SEQUENCESElectroporationbiology.organism_classificationSleeping Beauty transposon systemMolecular biologyGENETRANSFORMATIONGROUP-BBlotting SouthernLacticaseibacillus caseiLactobacillusMutagenesisDNA Transposable ElementsbacteriaTransposon mutagenesisELECTROPORATIONPLASMIDPlasmidsFood ScienceBiotechnology
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The Genome of Cardinium cBtQ1 Provides Insights into Genome Reduction, Symbiont Motility, and Its Settlement in Bemisia tabaci

2014

International audience; Many insects harbor inherited bacterial endosymbionts. Although some of them are not strictly essential and are considered facultative, they can be a key to host survival under specific environmental conditions, such as parasitoid attacks, climate changes, or insecticide pressures. The whitefly Bemisia tabaci is at the top of the list of organisms inflicting agricultural damage and outbreaks, and changes in its distribution may be associated to global warming. In this work, we have sequenced and analyzed the genome of Cardinium cBtQ1, a facultative bacterial endosymbiont of B. tabaci and propose that it belongs to a new taxonomic family, which also includes Candidatu…

Transposable elementhost–symbiont interactionGliding motility[SDV]Life Sciences [q-bio]CytophagaceaeMolecular Sequence DataBiologyGenomeIS elementsEvolution MolecularHemiptera03 medical and health sciencesPlasmidBotanyGene duplicationGeneticsAnimalsInsertion sequenceSymbiosisGeneEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesFacultativeBase SequenceCandidatus Cardinium hertigii030306 microbiologyfungibiochemical phenomena metabolism and nutrition13. Climate actionCandidatus Card...gliding motilityAmoebophilaceaeGenome BacterialResearch Article
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Identification of the ectosymbiotic bacteria of Mixotricha paradoxa involved in movement symbiosis

2003

Mixotricha paradoxa, a trichomonad from the hindgut of the Australian termite Mastotermes darwiniensis Froggatt, is a rare example of a movement symbiosis between eukaryotic and prokaryotic microorganisms. The surface of Mixotricha paradoxa is covered with spirochaetes and a rod-shaped bacterium. The four flagella at the anterior end seem only to alter the direction of movement, while the ectosymbiotic spirochaetes propel the flagellate cells. Based on a 16S rDNA sequence analysis after a semi-specific PCR, and subsequent fluorescence in situ hybridization applying helper oligonucleotides and a denaturing step of the 16S rRNA, three different spirochaete clones could be clearly identified o…

TreponemaMixotricha paradoxabiologyMastotermes darwiniensisSpirochaeteFlagellateFlagellum16S ribosomal RNAbiology.organism_classificationMicrobiologyBacteriaMicrobiologyEuropean Journal of Protistology
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Bacterial Ectosymbionts which Confer Motility: Mixotricha paradoxa from the Intestine of the Australian Termite Mastotermes darwiniensis

2005

TrichomonadidaMixotricha paradoxaSymbiosisbiologyMastotermes darwiniensisBotanyMotilityZoologybiology.organism_classificationBacteria
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Suppression of intestinal microbiota-dependent production of pro-atherogenic trimethylamine N-oxide by shifting L-carnitine microbial degradation.

2014

Abstract Aims Trimethylamine-N-oxide (TMAO) is produced in host liver from trimethylamine (TMA). TMAO and TMA share common dietary quaternary amine precursors, carnitine and choline, which are metabolized by the intestinal microbiota. TMAO recently has been linked to the pathogenesis of atherosclerosis and severity of cardiovascular diseases. We examined the effects of anti-atherosclerotic compound meldonium, an aza-analogue of carnitine bioprecursor gamma-butyrobetaine (GBB), on the availability of TMA and TMAO. Main methods Wistar rats received L-carnitine, GBB or choline alone or in combination with meldonium. Plasma, urine and rat small intestine perfusate samples were assayed for L-car…

TrimethylamineTrimethylamine N-oxideBacterial growthBiologyGeneral Biochemistry Genetics and Molecular BiologyStatistics NonparametricCholinechemistry.chemical_compoundMethylaminesBetaineTandem Mass SpectrometryCarnitineBlood plasmamedicineCholineAnimalsCarnitineGeneral Pharmacology Toxicology and PharmaceuticsRats WistarChromatography High Pressure LiquidMeldoniumCarbon IsotopesMicrobiotaGeneral MedicineBiosynthetic PathwaysRatsBetaineGastrointestinal TractBiochemistrychemistrymedicine.drugMethylhydrazinesLife sciences
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Extremophilic taxa predominate in a microbial community of photovoltaic panels in a tropical region

2021

ABSTRACT Photovoltaic panels can be colonized by a highly diverse microbial diversity, despite life-threatening conditions. Although they are distributed worldwide, the microorganisms living on their surfaces have never been profiled in tropical regions using 16S rRNA high-throughput sequencing and PICRUst metagenome prediction of functional content. In this work, we investigated photovoltaic panels from two cities in southeast Brazil, Sorocaba and Itatiba, using these bioinformatics approach. Results showed that, despite significant differences in microbial diversity (p < 0.001), the taxonomic profile was very similar for both photovoltaic panels, dominated mainly by Proteobacteria,…

Tropical Climatefood.ingredientbiologyConstruction MaterialsEcologyPhylumMicrobiotaCyanobacteriabiology.organism_classificationSphingomonasMicrobiologyExtremophilesfoodMicrobial population biologyMetagenomicsGenusRNA Ribosomal 16SHymenobacterSolar EnergyGeneticsMetagenomeDeinococcusProteobacteriaMolecular BiologyFEMS Microbiology Letters
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Inhibitor-Induced Dimerization of an Essential Oxidoreductase from African Trypanosomes

2018

Trypanosomal and leishmanial infections claim tens of thousands of lives each year. The metabolism of these unicellular eukaryotic parasites differs from the human host and their enzymes thus constitute promising drug targets. Tryparedoxin (Tpx) from Trypanosoma brucei is the essential oxidoreductase in the parasite's hydroperoxide-clearance cascade. In vitro and in vivo functional assays show that a small, selective inhibitor efficiently inhibits Tpx. With X-ray crystallography, SAXS, analytical SEC, SEC-MALS, MD simulations, ITC, and NMR spectroscopy, we show how covalent binding of this monofunctional inhibitor leads to Tpx dimerization. Intra- and intermolecular inhibitor-inhibitor, pro…

TrypanosomaProtein ConformationSpermidineDimerTrypanosoma brucei bruceiAntiprotozoal AgentsMolecular Dynamics SimulationTrypanosoma brucei010402 general chemistry01 natural sciencesCatalysischemistry.chemical_compoundThioredoxinsBacterial ProteinsIn vivoOxidoreductaseAnimalsHumansEnzyme Inhibitorschemistry.chemical_classificationbiology010405 organic chemistryHydrogen PeroxideGeneral ChemistryNuclear magnetic resonance spectroscopyLigand (biochemistry)biology.organism_classificationGlutathione0104 chemical sciencesEnzymechemistryBiochemistryDrug DesignChemically induced dimerizationProtein MultimerizationOxidoreductasesOxidation-ReductionProtein BindingAngewandte Chemie International Edition
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TBVAC2020: Advancing Tuberculosis Vaccines from Discovery to Clinical Development

2017

International audience; TBVAC2020 is a research project supported by the Horizon 2020 program of the European Commission (EC). It aims at the discovery and development of novel tuberculosis (TB) vaccines from preclinical research projects to early clinical assessment. The project builds on previous collaborations from 1998 onwards funded through the EC framework programs FP5, FP6, and FP7. It has succeeded in attracting new partners from outstanding laboratories from all over the world, now totaling 40 institutions. Next to the development of novel vaccines, TB biomarker development is also considered an important asset to facilitate rational vaccine selection and development. In addition, …

TuberculosiImmunologybacille Calmette–Guérin610 Medicine & healthReview[SDV.MHEP.PSR]Life Sciences [q-bio]/Human health and pathology/Pulmonology and respiratory tract[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesTuberculosis; Bacille Calmette-Guérin; Vaccination; Biomarker; Clinical trial; Portfolio management; Discovery[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]Immunology and AllergyBacille Calmette-Guérinbacille Calmette-Guérinbacille Calmette-Guerin2403 Immunology10179 Institute of Medical MicrobiologyBacille Calmette-Guérin; Biomarker; Clinical trial; Discovery; Portfolio management; Tuberculosis; Vaccination; Immunology and Allergy; Immunologyclinical trialvaccination[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human geneticstuberculosis2723 Immunology and Allergy570 Life sciences; biologybiomarkerportfolio managementdiscovery
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Spectrum of pncA Mutations in Multidrug-Resistant Mycobacterium tuberculosis Isolates Obtained in Latvia

2004

Pyrazinamide (PZA) is an effective antituberculous agent ([1][1]) that becomes active when bacterial pyrazinamidase converts it to pyrazinoic acid, which is toxic to mycobacteria ([4][2]). In Mycobacerium tuberculosis , PZA resistance is associated with the loss of pyrazinamidase activity, mainly

TuberculosisAntitubercular AgentsAmidohydrolasesMicrobiologyMycobacterium tuberculosischemistry.chemical_compoundPyrazinoic acidDrug Resistance Multiple BacterialmedicineHumansTuberculosisPharmacology (medical)Multidrug-Resistant Mycobacterium tuberculosisCodonLetters to the EditorPharmacologybiologyReverse Transcriptase Polymerase Chain ReactionMycobacterium tuberculosisPyrazinamidebiology.organism_classificationmedicine.diseaseLatviaPyrazinamideVirologyInfectious DiseaseschemistryMutationPncAmedicine.drugAntimicrobial Agents and Chemotherapy
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