Search results for "bacteria."

showing 10 items of 4757 documents

AP-1 Transcription Factor Serves as a Molecular Switch between Chlamydia pneumoniae Replication and Persistence

2015

ABSTRACT Chlamydia pneumoniae is a Gram-negative bacterium that causes acute or chronic respiratory infections. As obligate intracellular pathogens, chlamydiae efficiently manipulate host cell processes to ensure their intracellular development. Here we focused on the interaction of chlamydiae with the host cell transcription factor activator protein 1 (AP-1) and its consequence on chlamydial development. During Chlamydia pneumoniae infection, the expression and activity of AP-1 family proteins c-Jun, c-Fos, and ATF-2 were regulated in a time- and dose-dependent manner. We observed that the c-Jun protein and its phosphorylation level significantly increased during C. pneumoniae development.…

Small interfering RNAGene knockdownCellular Microbiology: Pathogen-Host Cell Molecular InteractionsTranscription GeneticImmunologyChlamydiaeGene Expression Regulation BacterialHep G2 CellsChlamydophila pneumoniaeBiologybiology.organism_classificationMicrobiologyBacterial LoadMicrobiologyTranscription Factor AP-1AP-1 transcription factorInfectious DiseasesTranscription (biology)Host-Pathogen InteractionsHepatocytesHumansPhosphorylationParasitologyTranscription factorIntracellularInfection and Immunity
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Role of secondary transporters and phosphotransferase systems in glucose transport by Oenococcus oeni.

2011

ABSTRACT Glucose uptake by the heterofermentative lactic acid bacterium Oenococcus oeni B1 was studied at the physiological and gene expression levels. Glucose- or fructose-grown bacteria catalyzed uptake of [ 14 C]glucose over a pH range from pH 4 to 9, with maxima at pHs 5.5 and 7. Uptake occurred in two-step kinetics in a high- and low-affinity reaction. The high-affinity uptake followed Michaelis-Menten kinetics and required energization. It accumulated the radioactivity of glucose by a factor of 55 within the bacteria. A large portion (about 80%) of the uptake of glucose was inhibited by protonophores and ionophores. Uptake of the glucose at neutral pH was not sensitive to degradation …

Snf3biologyMonosaccharide Transport ProteinsGlucose uptakePhysiology and MetabolismPhosphotransferasesGlucose transporterFructoseBiological TransportFructoseGene Expression Regulation Bacterialbiology.organism_classificationMicrobiologyLactic acidchemistry.chemical_compoundGlucosechemistryBiochemistryBacterial ProteinsMolecular BiologyOenococcusHexose transportOenococcusOenococcus oeniJournal of bacteriology
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Effectiveness of a new method of disinfecting the root canal, using Er, Cr:YSGG laser to kill Enterococcus faecalis in an infected tooth model.

2013

Some lasers have demonstrated to provide effective disinfection when used as adjunctive device to the conventional treatment. The aim of this in vitro study was to determine the effectiveness of the erbium, chromium:yttrium scandium gallium garnet (Er, Cr:YSGG) laser by measuring its bactericidal effect inside the root canal experimentally colonized with Enterococcus faecalis. The laser was tested at different irradiation times (30 and 60 s) and energy of impulses (75 and 25 mJ). A total of 52 single-rooted extracted human teeth were endodontically prepared with rotary instrumentation. All were sterilized and inoculated with a suspension of E. faecalis (105 bacteria/ml). The teeth were rand…

Sodium HypochloriteRoot canalRoot canalsDentistryDermatologyIrradiation timeLasers Solid-StateDental CariesEnterococcus faecalislaw.inventionchemistry.chemical_compoundSettore MED/28 - Malattie OdontostomatologichelawmedicineEnterococcus faecalisHumansIrradiationTooth RootGram-Positive Bacterial InfectionsPeriodontal Diseasesbiologybusiness.industryLasersbiology.organism_classificationLaserBactericidal effectModels DentalE. faecaliRoot Canal TherapyDisinfectionEr Cr:YSGG lasermedicine.anatomical_structurechemistrySodium hypochloriteSurgeryRotary instrumentationDental Pulp CavitybusinessNuclear chemistryDisinfectantsErbiumLasers in medical science
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A way to follow the viability of encapsulated Bifidobacterium bifidum subjected to a freeze-drying process in order to target the colon: Interest of …

2012

The aim of this work was to apply flow cytometry in order to assess and compare the viability of freeze-dried entrapped bacteria with an usual technique by quantification by plate count techniques. It also aimed at studying the effect of various cryoprotectants on the viability of an entrapped Bifidobacterium bifidum subjected to freeze-drying to check their ability to be delivered all along the gastro-intestinal tract. The alginate-pectinate beads were chosen as the encapsulation matrix added with different protectants. The beads were characterized by scanning electron microscopy and the viability was checked by both methods. The best combination to improve viability of entrapped bacteria …

Sodium ascorbateCryoprotectantAlginatesColonved/biology.organism_classification_rank.speciesPharmaceutical ScienceFlow cytometryFreeze-dryingchemistry.chemical_compoundCryoprotective AgentsGlucuronic AcidmedicineGlycerolViability assayBifidobacteriumMicrobial ViabilityBifidobacterium bifidumChromatographybiologymedicine.diagnostic_testved/biologyHexuronic AcidsFlow Cytometrybiology.organism_classificationMolecular biologyBacterial LoadFreeze DryingchemistryPectinsBifidobacteriumEuropean Journal of Pharmaceutical Sciences
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Contamination of soil by copper affects the dynamics, diversity, and activity of soil bacterial communities involved in wheat decomposition and carbo…

2009

ABSTRACT A soil microcosm experiment was conducted to evaluate the influence of copper contamination on the dynamics and diversity of bacterial communities actively involved in wheat residue decomposition. In the presence of copper, a higher level of CO 2 release was observed, which did not arise from greater wheat decomposition but from a higher level of stimulation of soil organic matter mineralization (known as the priming effect). Such functional modifications may be related to significant modifications in the diversity of active bacterial populations characterized using the DNA stable-isotope probing approach.

Soil biology[SDE.MCG]Environmental Sciences/Global Changes[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil study010501 environmental sciences[ SDV.MP.BAC ] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study01 natural sciencesApplied Microbiology and BiotechnologyTOXICITYIsotopesEnvironmental Microbiology[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environmentSoil PollutantsMICROBIAL COMMUNITIESAGRICULTURAL SOILS[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentSoil MicrobiologyTriticum0105 earth and related environmental sciencesEcologyBacteriaChemistrySoil organic matterSoil classification04 agricultural and veterinary sciencesMineralization (soil science)Biodiversity15. Life on landCarbon DioxideSoil contamination[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyCarbon[ SDE.MCG ] Environmental Sciences/Global ChangesAgronomy13. Climate actionSoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesMicrocosmSoil microbiologyCopperFood ScienceBiotechnology
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Differential copper impact on density, diversity and resistance of adapted culturable bacterial populations according to soil organic status

2010

International audience; The effect of copper on the abundance, diversity and resistance of viable heterotrophic and copper resistant bacterial populations (CuR) was evaluated in soils differing only by their amount and type of organic matter. These soils have been obtained using a vineyard soil that had been subjected to three different organic matter managements (Not Amended (NA) or amended with Straw (S) or Conifer Compost (CC)) in a long term field experiment. Soil microcosms were artificially contaminated with copper (250 mg Cu kg−1 of soil) and incubated for 35 days. Throughout the incubation, a differential copper impact on viable heterotrophic and CuR bacterial enumeration was demons…

Soil biology[SDV]Life Sciences [q-bio]PopulationSOIL ORGANIC MATTERSoil Sciencechemistry.chemical_element010501 environmental sciencesengineering.material01 natural sciencesMicrobiologycomplex mixturesCOPPER IMPACT03 medical and health sciencesSUBSTANCE ORGANIQUERalstoniaBotanyOrganic mattereducation030304 developmental biology0105 earth and related environmental sciences2. Zero hungerchemistry.chemical_classificationCOPPER RESISTANCE0303 health scienceseducation.field_of_studybiologyCompostSoil organic matter15. Life on landbiology.organism_classificationCopper6. Clean waterHorticulturechemistryInsect ScienceSoil waterBACTERIA[SDE]Environmental SciencesengineeringRESISTANCE
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The dynamics of soil bacterial community structure in response to yearly repeated agricultural copper treatments

2008

International audience; The annual dynamics of soil bacterial community structure, including early, dose-dependent and transient modifications, was observed consecutively at different levels of copper contamination (high: 48 kg Cu ha−1, low: 16 kg Cu ha−1) repeated yearly over a three-year field experiment. Repeated low-level Cu contamination led to an increase in community stability to metal stress without a long-term shift in the population structure, whereas repeated high-level Cu contamination induced a novel and stable bacterial community structure. Furthermore, field experimentation highlighted that episodic climatic stress can modulate copper impact by enhancing community stability.

Soil testField experimentRELATION SOL MICROORGANISMEchemistry.chemical_elementBACTERIAL COMMUNITYBiologyMicrobiologyCOPPER IMPACTSoil03 medical and health sciencesAnimal scienceSoil PollutantsMolecular BiologyFIELD EXPERIMENTEcosystemSoil Microbiology2. Zero hunger0303 health sciencesBacteria030306 microbiologyEcologyCommunity structure04 agricultural and veterinary sciencesGeneral MedicineContaminationCopper[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicrobial population biologychemistryARISA FINGERPRINTING13. Climate actionSoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesSoil microbiologyCopper
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Protein and DNA fingerprinting of a soil bacterial community inoculated into three different sterile soils

2007

The functional and genetic structures of a soil bacterial community were characterized after inoculation into three different sterile soils using a protein and DNA fingerprinting method, respectively. Principal component analysis (PCA) of profiles revealed that, depending on soil characteristics, bacterial communities with similar genetic structures harbored different functional structures and thus could potentially be of differing ecological significance for soil functioning. Co-inertia analysis between protein fingerprinting data and the corresponding sets of soil physicochemical characteristics demonstrated the correlation between the functional structure of the bacterial community and s…

Soil testRELATION SOL MICROORGANISMEMicrobial metabolismBACTERIAL COMMUNITYCARTOGRAPHIE GENETIQUEBiologycomplex mixturesMicrobiologyMicrobiologySoilBacterial ProteinsPeptide mass fingerprintingBotanyMolecular BiologySoil MicrobiologyBacteriaInoculationPROTEIN FINGERPRINTINGGeneral MedicineDNA Fingerprinting[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicrobial population biologyDNA profilingSoil waterElectrophoresis Polyacrylamide GelMETAPROTEOMESoil microbiologyResearch in Microbiology
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Sampling strategy in molecular microbial ecology: influence of soil sample size on DNA fingerprinting analysis of fungal and bacterial communities.

2003

Assessing soil microbial community structure by the use of molecular techniques requires a satisfactory sampling strategy that takes into account the high microbial diversity and the heterogeneous distribution of microorganisms in the soil matrix. The influence of the sample size of three different soil types (sand, silt and clay soils) on the DNA yield and analysis of bacterial and fungal community structure were investigated. Six sample sizes from 0.125 g to 4 g were evaluated. The genetic community structure was assessed by automated ribosomal intergenic spacer analysis (A-RISA fingerprint). Variations between bacterial (B-ARISA) and fungal (F-ARISA) community structure were quantified b…

Soil testRibosomal Intergenic Spacer analysisSoil scienceBiologyMicrobiologyPolymerase Chain Reaction03 medical and health sciencesSoilMicrobial ecologyBotanyDNA Ribosomal SpacerBiomass[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSSoil Microbiology030304 developmental biology2. Zero hunger0303 health sciencesPrincipal Component AnalysisPolymorphism GeneticBacteriaEcology030306 microbiologyCommunity structureFungiSoil classificationDNA15. Life on landBIOLOGIE MOLECULAIRESoil typeDNA Fingerprinting[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicrobial population biologySoil waterElectrophoresis Polyacrylamide GelEnvironmental microbiology
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Genetic parameters for somatic cell score according to udder infection status in Valle del Belice dairy sheep and impact of imperfect diagnosis of in…

2010

Abstract Background Somatic cell score (SCS) has been promoted as a selection criterion to improve mastitis resistance. However, SCS from healthy and infected animals may be considered as separate traits. Moreover, imperfect sensitivity and specificity could influence animals' classification and impact on estimated variance components. This study was aimed at: (1) estimating the heritability of bacteria negative SCS, bacteria positive SCS, and infection status, (2) estimating phenotypic and genetic correlations between bacteria negative and bacteria positive SCS, and the genetic correlation between bacteria negative SCS and infection status, and (3) evaluating the impact of imperfect diagno…

Somatic cellInheritance PatternsCell CountMastitisclinical mastitisSettore AGR/17 - Zootecnica Generale E Miglioramento GeneticoPrevalenceGenetics(clinical)Udderlcsh:SF1-1100Geneticsmixture modelbiologyintegumentary systemGeneral Medicinesomatic cell count diagnosis of infection dairy sheepDairyingPhenotypemedicine.anatomical_structureItalycountHealthprotein percentageFemaletissueslcsh:QH426-470Sheep DiseaseslactationAnimal Breeding and GenomicsSensitivity and SpecificityGenetic correlationMammary Glands AnimalQuantitative Trait Heritablemilk-yieldGeneticsmedicineAnimalsFokkerij en GenomicaDiagnostic Errorssubclinical mastitisEcology Evolution Behavior and SystematicsSelection (genetic algorithm)SheepBacteriaResearchewespathogensHeritabilitymedicine.diseasebiology.organism_classificationMastitislcsh:Geneticsnervous systemcattleWIASAnimal Science and ZoologyFlocklcsh:Animal cultureBacteria
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