Search results for "buchnera"

showing 10 items of 61 documents

Molecular Characterization of the Leucine Plasmid from Buchnera aphidicola , Primary Endosymbiont of the Aphid Acyrthosiphon pisum

2000

The complete sequence of the leucine plasmid of Buchnera aphidicola from the aphid Acyrthosiphon pisum (pLeu-BAp) is reported. Its gene organization was concordant with those of other leucine plasmids of Buchnera from aphids of the Aphidini and Macrosiphini tribes. Three inverted repeats are present in pLeu-BAp. Two of them are also present in pLeu from the family Aphididae: (i) SIR1, located downstream the leucine operon, resembles a rho-independent terminator of transcription, and (ii) LIR1, located upstream of the leucine operon, is suggested to be involved in transcription termination or messenger stability. The third, located near the putative ATGC repeats involved in the origin of rep…

OperonInverted repeatMolecular Sequence DataMinisatellite RepeatsBiologyOrigin of replicationApplied Microbiology and BiotechnologyMicrobiologyOpen Reading FramesPlasmidBuchneraLeucinePhylogeneticsAnimalsSymbiosisPhylogenyGeneticsBase Sequencefood and beveragesGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumTerminator (genetics)Genes BacterialAphidsBuchneraMicrosatellite RepeatsPlasmidsCurrent Microbiology
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Discovery and molecular characterization of a plasmid localized in Buchnera sp. bacterial endosymbiont of the aphid Rhopalosiphum padi

1995

We have identified and completely sequenced a novel plasmid isolated from the aphid Rhopalosiphum padi. Evidence which suggests that the plasmid occurs localized within the bacterial endosymbionts is presented. The plasmid contains the four genes that constitute the entire leucine operon. This fact makes it really unique since most plasmids are dispensable and lack genes that encode essential anabolic functions. Four more phloem-feeding aphid species also seem to contain homologous plasmids. Although further work is necessary, we hypothesize that this plasmid has appeared during the evolution of the symbiotic association between the aphid and the bacterial endosymbiont. The fact that this p…

OperonMolecular Sequence DataPlasmidSpecies SpecificityRhopalosiphum padiGram-Negative BacteriaGeneticsAnimalsAmino Acid SequenceSymbiosisMolecular BiologyGeneConserved SequenceEcology Evolution Behavior and SystematicsGeneticsAphidBase SequenceSequence Homology Amino AcidbiologyEndosymbiosisfungifood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationAphidsRepliconDNA CircularLeucineBuchneraPlasmidsJournal of Molecular Evolution
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Settling Down: The Genome of Serratia symbiotica from the Aphid Cinara tujafilina Zooms in on the Process of Accommodation to a Cooperative Intracell…

2014

Particularly interesting cases of mutualistic endosymbioses come from the establishment of co-obligate associations of more than one species of endosymbiotic bacteria. Throughout symbiotic accommodation from a free-living bacterium, passing through a facultative stage and ending as an obligate intracellular one, the symbiont experiences massive genomic losses and phenotypic adjustments. Here, we scrutinized the changes in the coevolution of Serratia symbiotica and Buchnera aphidicola endosymbionts in aphids, paying particular attention to the transformations undergone by S. symbiotica to become an obligate endosymbiont. Although it is already known that S. symbiotica is facultative in Acyrt…

SerratiaGenomeaphid endosymbiont03 medical and health sciencesBuchneraBotanyGeneticsAnimalsriboflavingenome reductionSymbiosisPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGene RearrangementGenetics0303 health sciencesFacultativeAphidbiologyObligate030306 microbiologyHost (biology)food and beveragesSerratia symbioticabiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumBuchnera aphidicolaAphidsMobile genetic elementsco-obligateBuchneraResearch ArticleGenome Biology and Evolution
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Evolution of the Secondary Symbiont “Candidatus Serratia symbiotica” in Aphid Species of the Subfamily Lachninae ▿†

2008

ABSTRACT Buchnera aphidicola BCc, the primary endosymbiont of the aphid Cinara cedri (subfamily Lachninae), is losing its symbiotic capacity and might be replaced by the coresident “ Candidatus Serratia symbiotica.” Phylogenetic and morphological analyses within the subfamily Lachninae indicate two different “ Ca . Serratia symbiotica” lineages and support the longtime coevolution of both symbionts in C. cedri .

SubfamilySerratiaMolecular Sequence DataApplied Microbiology and BiotechnologySerratiaEvolution MolecularSymbiosisBuchneraPhylogeneticsRNA Ribosomal 16SBotanyInvertebrate MicrobiologyAnimalsSymbiosisCoevolutionPhylogenyGeneticsAphidEcologybiologyPhylogenetic treeGenes rRNASequence Analysis DNAbiology.organism_classificationAphidsBuchneraFood ScienceBiotechnology
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Modular organization in the reductive evolution of protein-protein interaction networks

2006

Analysis of the reduction in genome size of Buchnera aphidicola from its common ancestor E. coli shows that the organization of networks into modules is the property that seems to be directly related with the evolutionary process of genome reduction.

Systems biologyComplex systemComputational biologyBiologyGenomeProtein protein interaction networkProtein–protein interactionBuchneraInteraction networkProtein Interaction MappingEscherichia coliAnimalsHumansDatabases ProteinGeneticsbusiness.industrySystems BiologyResearchbiochemical phenomena metabolism and nutritionModular designbiology.organism_classificationBiological EvolutionProtein Structure TertiaryStructural Homology ProteinMultiprotein ComplexesBuchnerabusinessAlgorithmsGenome BacterialGenome Biology
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Molecular characterization of cyclic and obligate parthenogens in the aphid Rhopalosiphum padi (L.)

1996

Holocyclic clones of the aphid Rhopalosiphum padi (L.) reproduce by cyclic parthenogenesis, whereas anholocyclic individuals are obligate parthenogens. Mitochondrial DNA (mtDNA) and random amplified polymorphic DNA markers in R . padi as well as plasmid DNA markers of its bacterial endosymbiont, Buchnera aphidicola , were examined to determine the extent of genetic divergence between clones with these differing breeding systems. These analyses revealed that cyclically parthenogenetic lineages possessed differing mtDNA and plasmid haplotypes than most obligately asexual clones. The extent of sequence divergence between these maternally inherited molecules suggests a relatively ancient origin…

[SDE] Environmental SciencesMale0106 biological sciencesMitochondrial DNAGenetic Linkage[SDV]Life Sciences [q-bio]Molecular Sequence DataParthenogenesisBiologyDNA Mitochondrial010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesPlasmidRhopalosiphum padiAnimalsGeneComputingMilieux_MISCELLANEOUSDNA Primers030304 developmental biologyGeneral Environmental ScienceGenetics0303 health sciencesBase SequenceGeneral Immunology and MicrobiologyObligateGeneral Medicinebiology.organism_classificationRandom Amplified Polymorphic DNA Technique[SDV] Life Sciences [q-bio]Genetic divergenceHaplotypesGenetic markerAphids[SDE]Environmental SciencesFemaleGeneral Agricultural and Biological SciencesBuchneraPlasmidsProceedings of the Royal Society of London. Series B: Biological Sciences
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Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria.

2005

Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling several characteristics, the main ones being that an ortholog was present in every genome and that none of them had been acquired by horizontal gene transfer. Genome rearrangement distances were estimated based on either the number of breakpoints or the minimal number of inversions separating two genomes. Breakpoint and inversion distances were highly correlated, indicating that inversions were the main type of rearrangement event in gamma-Proteobacteria. In general, the progressive increase in seque…

food.ingredientTime FactorsGene Transfer HorizontalYersinia pestisLineage (evolution)BlochmanniaBiologyWigglesworthia glossinidiaGenomeEvolution MolecularfoodPhylogeneticsGene OrderGeneticsEscherichia coliMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyGeneticsGenomePhylogenetic treeModels GeneticModels Theoreticalbiology.organism_classificationBiological EvolutionHorizontal gene transferBuchneraGammaproteobacteriaGenome BacterialMolecular biology and evolution
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Patterns and rates of nucleotide substitution, insertion and deletion in the endosymbiont of antsBlochmannia floridanus

2009

Genome reduction is a general process that has been studied in numerous symbiotic bacteria associated with insects. We investigated the last stages of genome degradation in Blochmannia floridanus, a mutualistic bacterial endosymbiont of the ant Camponotus floridanus. We determined the tempo (rates of insertion and deletion) and mode (size and number of insertion-deletion events) of the process in the last 200,000 years by analysing a total of 16 intergenic regions in several strains of this endosymbiont from different ant populations. We provide the first calculation of the reduction rate for noncoding DNA in this endosymbiont (2.2 x 10(-8) lost nucleotides/site/year) and compare it with th…

medicine.disease_causePolymerase Chain ReactionPolymorphism Single NucleotideGenomeIntergenic regionGeneticsmedicineAnimalsSymbiosisIndelEscherichia coliEcosystemPhylogenyEcology Evolution Behavior and SystematicsSequence DeletionGeneticsGenomeBase SequencebiologyAntsbiology.organism_classificationNoncoding DNADNA Transposable ElementsFloridaMicrosatelliteCamponotus floridanusBuchneraMolecular Ecology
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A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations.

2011

International audience; Buchnera aphidicola is an obligate symbiotic bacterium that sustains the physiology of aphids by complementing their exclusive phloem sap diet. In this study, we reappraised the transport function of different Buchnera strains, from the aphids Acyrthosiphon pisum, Schizaphis graminum, Baizongia pistaciae and Cinara cedri, using the re-annotation of their transmembrane proteins coupled with an exploration of their metabolic networks. Although metabolic analyses revealed high interdependencies between the host and the bacteria, we demonstrate here that transport in Buchnera is assured by low transporter diversity, when compared to free-living bacteria, being mostly bas…

multidisciplinary scienceslcsh:MedicinePlant ScienceinterdépendanceBiochemistryTransmembrane Transport ProteinsBacterial Physiologylcsh:ScienceIntegral membrane proteinGeneticsbactérie0303 health sciencesPlant PestsMultidisciplinaryMicroscopy ConfocalbiologyMembrane transport protein030302 biochemistry & molecular biologybuchnera aphidicolamicroscopy confocalGenomicsHydrogen-Ion ConcentrationTransmembrane proteinFunctional GenomicsBiochemistrysymbiosis geneticsMetabolic PathwaysMetabolic Networks and PathwaysResearch Articlecell membrane ultrastructurescience and technologyMicrobiology03 medical and health sciencesMetabolic NetworksBuchneraAnimalsSymbiosisBiology030304 developmental biologyObligateCell Membranelcsh:RProteinsComputational BiologyMembrane Transport ProteinsBiological TransportBacteriologyPlant Pathologybiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumTransmembrane ProteinsaphidsMESH: SymbioseMetabolismMembrane proteinGenes Bacterialbiology.proteinlcsh:QBuchnerabuchnera aphidicola;aphids;microscopy confocal;symbiosis genetics;cell membrane ultrastructure;multidisciplinary sciences;science and technologyFunction (biology)[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisPLoS ONE
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Molecular evolution of aphids and their primary (Buchnera sp.) and secondary endosymbionts: Implications for the role of symbiosis in insect evolution

2001

Aphids maintain an obligate, endosymbiotic association with Buchnera sp., a bacterium closely related to Escherichia coli. Bacteria are housed in specialized cells of organ-like structures called bacteriomes in the hemocoel of the aphid and are maternally transmitted. Phylogenetic studies have shown that the association had a single origin, dated about 200-250 million years ago, and that host and endosymbiont lineages have evolved in parallel since then. However, the pattern of deepest branching within the aphid family remains unsolved, which thereby hampers an appraisal of, for example, the role played by horizontal gene transfer in the early evolution of Buchnera. The main role of Buchner…

plasmidsacyrthosiphon-pisumPhylogenetic Analysishomopterasequencesystembiochemical phenomena metabolism and nutritionleucine biosynthesisPRI BioscienceAphidsGenome ReductionaphidicolabacteriagenesmicroorganismsSecondary EndosymbiontsBuchnera sp
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