Search results for "cell behavior"

showing 10 items of 91 documents

Bifurcation of traveling waves in a Keller–Segel type free boundary model of cell motility

2018

We study a two-dimensional free boundary problem that models motility of eukaryotic cells on substrates. This problem consists of an elliptic equation describing the flow of cytoskeleton gel coupled with a convection-diffusion PDE for the density of myosin motors. The two key properties of this problem are (i) presence of the cross diffusion as in the classical Keller-Segel problem in chemotaxis and (ii) nonlinear nonlocal free boundary condition that involves curvature of the boundary. We establish the bifurcation of the traveling waves from a family of radially symmetric steady states. The traveling waves describe persistent motion without external cues or stimuli which is a signature of …

PhysicsApplied MathematicsGeneral Mathematics010102 general mathematicsMathematical analysisBoundary (topology)Curvature01 natural sciencesQuantitative Biology::Cell BehaviorQuantitative Biology::Subcellular Processes010104 statistics & probabilityNonlinear systemElliptic curveFlow (mathematics)Free boundary problemFree boundary condition0101 mathematicsBifurcationCommunications in Mathematical Sciences
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Axisymmetric solutions for a chemotaxis model of Multiple Sclerosis

2018

In this paper we study radially symmetric solutions for our recently proposed reaction–diffusion–chemotaxis model of Multiple Sclerosis. Through a weakly nonlinear expansion we classify the bifurcation at the onset and derive the amplitude equations ruling the formation of concentric demyelinating patterns which reproduce the concentric layers observed in Balò sclerosis and in the early phase of Multiple Sclerosis. We present numerical simulations which illustrate and fit the analytical results.

PhysicsApplied MathematicsGeneral MathematicsMultiple sclerosisNumerical analysis010102 general mathematicsMathematical analysisRotational symmetryChemotaxiConcentricmedicine.disease01 natural sciencesQuantitative Biology::Cell Behavior010305 fluids & plasmasNonlinear systemAmplitudeAxisymmetric solution0103 physical sciencesmedicineMathematics (all)Multiple sclerosi0101 mathematicsEarly phaseBifurcationRicerche di Matematica
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Sensitivity to Initial Conditions in an Extended Activator--Inhibitor Model for the Formation of Patterns

2018

Despite simplicity, the synchronous cellular automaton [D.A. Young, Math. Biosci. 72, 51 (1984)] enables reconstructing basic features of patterns of skin. Our extended model allows studying the formatting of patterns and their temporal evolution also on the favourable and hostile environments. As a result, the impact of different types of an environment is accounted for the dynamics of patterns formation. The process is based on two diffusible morphogens, the short-range activator and the long-range inhibitor, produced by differentiated cells (DCs) represented as black pixels. For a neutral environment, the extended model reduces to the original one. However, even the reduced model is stat…

PhysicsFOS: Physical sciencesGeneral Physics and AstronomyComputational Physics (physics.comp-ph)Reduced modelCellular automatonExtended modelAverage sizeInitial distributionFOS: Biological sciencesCell Behavior (q-bio.CB)Quantitative Biology - Cell BehaviorBiological systemPhysics - Computational PhysicsActa Physica Polonica B
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Synchronized rotation in swarms of magnetotactic bacteria.

2017

Self-organizing behavior has been widely reported in both natural and artificial systems, typically distinguishing between temporal organization (synchronization) and spatial organization (swarming). Swarming has been experimentally observed in systems of magnetotactic bacteria under the action of external magnetic fields. Here we present a model of ensembles of magnetotactic bacteria in which hydrodynamic interactions lead to temporal synchronization in addition to the swarming. After a period of stabilization during which the bacteria form a quasiregular hexagonal lattice structure, the entire swarm begins to rotate in a direction opposite to the direction of the rotation of the magnetic …

PhysicsPeriodicityMagnetotactic bacteriaRotationMovementSwarming (honey bee)Swarm behaviourRotationBacterial Physiological Phenomena01 natural sciencesModels BiologicalQuantitative Biology::Cell Behavior010305 fluids & plasmasMagnetic fieldMagnetic Fields0103 physical sciencesArtificial systemsHydrodynamicsHexagonal latticeComputer SimulationTemporal organization010306 general physicsBiological systemPhysical review. E
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Magnetic dipole with a flexible tail as a self-propelling microdevice.

2012

By numerical simulations, it is illustrated that a magnetic dipole with a flexible tail behaves as a swimmer in AC magnetic fields. The behavior of the swimmer on long time scales is analyzed and it is shown that due to the flexibility of the tail two kinds of torques arise, the first is responsible for the orientation of the swimmer perpendicularly to the AC field and the second drags the filament in the direction of the rotating field. Due to this, circular trajectories of the swimmer are possible; however, these are unstable. The self-propulsion velocity of this swimmer is higher than the velocities of other magnetic microdevices for comparable values of the magnetoelastic number.

PhysicsPhysics::Biological PhysicsFlexibility (anatomy)MiniaturizationField (physics)MechanicsEquipment DesignRoboticsQuantitative Biology::OtherQuantitative Biology::Cell BehaviorMagnetic fieldProtein filamentEquipment Failure AnalysisMagneticsMotionmedicine.anatomical_structureMagnetic FieldsOrientation (geometry)medicinePerpendicularTorqueMagnetic dipolePhysical review. E, Statistical, nonlinear, and soft matter physics
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Ballistic phonon transport in dielectric membranes

2006

We have calculated the ballistic phononic heat transport in dielectric membranes as a function of radiator temperature and membrane thickness. The phonon modes of such membranes are known as Lamb-modes from elasticity theory. The striking result is that, for a fixed temperature, the radiated power first decreases with decreasing membrane thickness, but then develops a minimum when the transition to two dimensionality is reached. Further decrease of the membrane thickness in the 2D limit leads to increasing radiated power.

PhysicsPhysics::Biological PhysicsNuclear and High Energy PhysicsCondensed matter physicsPhononMembrane thicknessDielectricEffective radiated powerElasticity (physics)Quantitative Biology::Cell BehaviorQuantitative Biology::Subcellular ProcessesMembraneBallistic conductionRadiator (engine cooling)InstrumentationNuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment
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Hydrodynamic synchronization of pairs of puller type magnetotactic bacteria in a high frequency rotating magnetic field.

2019

Ensembles of magnetotactic bacteria are known to interact hydrodynamically and form swarms under the influence of external magnetic fields. We describe the synchronization of puller type magnetotactic bacteria in a rotating magnetic field by representing the bacteria as hydrodynamic force dipoles. Numerical simulations show that at moderate values of the hydrodynamic interaction parameter large ensembles of asynchronously rotating bacteria randomly eject propagating doublets of synchronized bacteria. We quantitatively analyze the dynamics of the doublets and show that an important role in the formation of these propagating structures is played by the parameters characterizing the possible t…

PhysicsPhysics::Biological PhysicsRotating magnetic fieldMagnetotactic bacteriaDynamics (mechanics)02 engineering and technologyGeneral ChemistryType (model theory)010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciencesQuantitative Biology::Cell Behavior0104 chemical sciencesMagnetic fieldQuantitative Biology::Subcellular ProcessesSynchronization (alternating current)DipoleChemical physics0210 nano-technologySoft matter
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Ewald sum for hydrodynamic interactions of rigid spherical microswimmers

2018

We derive the Ewald sum decomposition of the grand mobility tensor which captures the hydrodynamic interactions in an infinite suspension of rigid spherical microswimmers. The grand mobility tensor connects the motion of an individual swimmer to the active and passive forces and torques acting on all the swimmers, and it is calculated based on a minimal microswimmer model incorporating the swimmers' finite body size. Our results have direct applications to the Stokesian dynamics simulations of an infinite suspension of rigid-bodied microswimmers. They also provide a platform to develop more advanced methods such as particle-mesh-Ewald-sum and accelerated Stokesian dynamics simulations.

PhysicsPhysics::Biological PhysicsStokesian dynamicsGeneral Physics and AstronomyMotion (geometry)Body sizeQuantitative Biology::Other01 natural sciencesQuantitative Biology::Cell Behavior010305 fluids & plasmasCondensed Matter::Soft Condensed MatterClassical mechanics0103 physical sciencesTorqueTensorPhysical and Theoretical Chemistry010306 general physicsSuspension (vehicle)The Journal of Chemical Physics
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Diffusion of magnetotactic bacterium in rotating magnetic field

2011

Swimming trajectory of a magnetotactic bacterium in a rotating magnetic field is a circle. Random reversals of the direction of the bacterium motion induces a random walk of the curvature center of the trajectory. In assumption of the distribution of the switching events according to the Poisson process the diffusion coefficient is calculated in dependence on the frequency of the rotating field and the characteristic time between the switching events. It is confirmed by the numerical simulation of the random walk of the bacterium in the rotating magnetic field.

PhysicsRotating magnetic fieldComputer simulationField (physics)Condensed Matter PhysicsCurvatureRandom walkQuantitative Biology::Cell BehaviorElectronic Optical and Magnetic MaterialsClassical mechanicsTrajectoryMagnetotactic bacteriumDiffusion (business)human activitiesJournal of Magnetism and Magnetic Materials
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3D motion of flexible ferromagnetic filaments under a rotating magnetic field.

2020

Ferromagnetic filaments in a rotating magnetic field are studied both numerically and experimentally. The filaments are made from micron-sized ferromagnetic particles linked with DNA strands. It is found that at low frequencies of the rotating field a filament rotates synchronously with the field and beyond a critical frequency it undergoes a transition to a three dimensional regime. In this regime the tips of the filament rotate synchronously with the field on circular trajectories in the plane parallel to the plane of the rotating field. The characteristics of this motion found numerically match the experimental data and allow us to obtain the physical properties of such filaments. We als…

PhysicsRotating magnetic fieldCondensed matter physicsField (physics)Plane (geometry)FOS: Physical sciences02 engineering and technologyGeneral ChemistryCondensed Matter - Soft Condensed Matter021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciencesRodQuantitative Biology::Cell BehaviorProtein filamentQuantitative Biology::Subcellular ProcessesFerromagnetismCritical frequency0103 physical sciencesSoft Condensed Matter (cond-mat.soft)010306 general physics0210 nano-technologyMixing (physics)Soft matter
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