Search results for "chironomidae"

showing 10 items of 53 documents

Subrepeats result from regional DNA sequence conservation in tandem repeats in Chironomus telomeres

1990

Repeat units, widespread in eukaryotic genomes, are often partially or entirely built up of subrepeats. Homogenization between whole repeat units arranged in tandem usually can best be understood as a result of unequal crossing over. Such a mechanism is less plausible for maintaining similarities between subrepeats within a repeat unit when present in a regular array. In Chironomus telomeres, large blocks of tandemly repeated approximately 350 base-pair units contain two or three pairs of subrepeats with high mutual identities, embedded in linker DNA, non-repetitive within the repeat unit. Measurements of evolutionary base changes in two closely related species, Chironomus tentans and Chiro…

GeneticsGenomic LibraryUnequal crossing overBase SequencebiologyMolecular Sequence DataGene AmplificationDNAbiology.organism_classificationBiological EvolutionGenomeLinker DNAChironomidaeDNA sequencingSpecies SpecificityTandem repeatStructural BiologyMolecular evolutionSequence Homology Nucleic AcidAnimalsChironomusMolecular BiologyRepetitive Sequences Nucleic AcidRepeat unitJournal of Molecular Biology
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Molecular Evolution of the Globin Gene Cluster E in Two Distantly Related Midges, Chironomus pallidivittatus and C. thummi thummi

1998

We have studied the evolutionary dynamics of a cluster of insect globin genes by comparing the organization and sequence of the gene group in two distantly related species, Chironomus pallidivittatus and C. t. thummi. Although the general architecture of the globin gene cluster has been conserved, we have found an additional, previously undescribed gene (named Cpa F) in C. pallidivittatus which shows signs of accelerated sequence evolution at nonsynonymous codon positions. This new gene is clearly functional, as demonstrated by Northern analysis. Comparison of paralogous and orthologous genes reveals patterns of intraspecific sequence homogenization. The head-to-head-oriented globin 3 and 4…

GeneticsNonsynonymous substitutionMolecular Sequence DataStructural geneNucleic acid sequenceGenes InsectBiologyChironomidaeGlobinsEvolution MolecularMolecular evolutionMultigene FamilyGeneticsAnimalsCoding regionAmino Acid SequenceGene conversionGlobinMolecular BiologyGeneEcology Evolution Behavior and SystematicsJournal of Molecular Evolution
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New Foldback transposable element TFB1 found in histone genes of the midge Chironomus thummi

1990

A new Foldback transposable element (TFB1) has been found in the histone H1-H3 intergenic region in the midge Chironomus thummi thummi. TFB1 has long terminal inverted repeats, composed of short, degenerate subrepeats and is flanked by nine or ten base-pair “target site” duplications. TFB1 is present in at least two adjacent histone gene units in Ch. th. thummi, indicating a homogenization of histone gene repeats. The copy number and chromosomal distribution of TFB1 are different in the closely related subspecies Ch. th. thummi and Ch. th. piger, showing that amplification, elimination and transposition of TFB1 have occurred recently during evolution.

GeneticsTransposable elementBase SequenceFoldback (sound engineering)Inverted repeatMolecular Sequence DataRestriction MappingGene AmplificationNucleic acid sequenceBiologyBiological EvolutionChironomidaeHistonesTransposition (music)Intergenic regionHistoneStructural BiologyMutationDNA Transposable Elementsbiology.proteinAnimalsMolecular BiologyGeneRepetitive Sequences Nucleic AcidJournal of Molecular Biology
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Effects of Activated Carbon on PCB Bioaccumulation and Biological Responses of Chironomus riparius in Full Life Cycle Test

2016

The nonbiting midge Chironomus riparius was used to study the remediation potential and secondary effects of activated carbon (AC, ø 63-200 μm) in PCB contaminated sediments. AC amendments efficiently reduced PCB bioavailability determined by Chironomus riparius bioaccumulation tests and passive samplers. PCBs were shown to transfer from larvae to adults. Lower PCB concentrations were observed in adult midges emerging from AC amended compared to unamended sediments. Increased reproduction, survival, larval growth and gut wall microvilli length were observed with low AC dose (0.5% sediment dw) compared to unamended sediment, indicating an improved success of larvae in the sediment with low o…

Geologic SedimentsEnvironmental remediationta1172ved/biology.organism_classification_rank.species0211 other engineering and technologies02 engineering and technology010501 environmental sciences01 natural sciencesChironomidaelarval developmentAnimalsEnvironmental Chemistryactivated carbonta2180105 earth and related environmental sciencesTotal organic carbonChironomus riparius021110 strategic defence & security studiesLarvaPCBbiologyChironomus ripariusved/biologyfungiSedimentcontaminated sedimentsGeneral Chemistrybiology.organism_classificationPolychlorinated BiphenylsCarbonBioavailabilitybioaccumulationCharcoalBioaccumulationEnvironmental chemistryMidgeEnvironmental Science & Technology
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SIMILARITIES IN BIOACCUMULATION PATTERNS OF POLYCHLORINATED DIBENZO-p-DIOXINS AND FURANS AND POLYCHLORINATED DIPHENYL ETHERS IN LABORATORY-EXPOSED OL…

2003

Sediment and chironomid samples were collected from a river in the vicinity of and downstream from a closed chlorophenol production plant, and they were analyzed for polychlorinated dibenzo-p-dioxins and furans (PCDD/F) and polychlorinated diphenyl ethers (PCDE). Bioaccumulation of these compounds from the sediments by the oligochaeta, Lumbriculus variegatus, and semipermeable membrane devices (SPMDs) was studied in a 28-d bioaccumulation test. The sum concentrations of PCDD/Fs and PCDEs in sediments varied spatially, peaking at the site below the production plant, but the congener composition remained fairly constant throughout the river. The sum concentrations of chironomids, oligochaetes…

Geologic SedimentsLumbriculus variegatusPolychlorinated Dibenzodioxins010504 meteorology & atmospheric sciencesHealth Toxicology and MutagenesisLumbriculidae010501 environmental sciences01 natural sciencesChironomidaePolychlorinated diphenyl ethersRiversAnimalsSoil PollutantsEnvironmental ChemistryTissue DistributionOligochaetaWater pollutionBenzofurans0105 earth and related environmental sciencesbiologyChemistryReproducibility of ResultsSedimentMembranes ArtificialEnvironmental ExposureEnvironmental exposureDibenzofurans Polychlorinatedbiology.organism_classificationPolychlorinated BiphenylsCongenerBioaccumulationEnvironmental chemistryEthersEnvironmental Toxicology and Chemistry
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The Chironomidae (Diptera) in Two Polyhumic Reservoirs in Western Finland

1980

ABSTRACT Composition and distribution of chironomid and other benthic fauna was studied at two adjacent 15 years old polyhumic reservoirs in western Finland by taking benthic and emergence samples. The littoral (0.5 m) coarse debris habitats, previously coniferous forest, had considerably less chironomid larvae (6–7 types, maximally 800 individuals or 0.1 g, AFDW/m2) than the mossgrown habitats, previously peatland (9–10 types, maximally 4000 individuals or 3·4 g/m2). The Chironomus larvae which were dominant at the moss sites were almost lacking at the coarse debris sites. Zalutschia zalutschicola Lipina and Tonytarsus larvae were found only at the deepest areas at 6 m. Altogether 17 speci…

HabitatbiologyBenthic zoneEcologyFaunaLittoral zoneChironomusAblabesmyiabiology.organism_classificationMossChironomidae
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Transcription of heat shock gene loci versus non-heat shock loci in Chironomus polytene chromosomes: evidence for heat-induced formation of novel put…

1995

The heat shock response of Chironomus polytene chromosomes was reexamined. The in vivo effects of heat shock on chromosomal [3H]uridine labeling, RNA polymerase II distribution and ribonucleoprotein (RNP) formation were investigated. One primary result is a clarification of the number and location of chromosomal sites strongly induced by treatment at 37 degrees C for 60 min. In total, seven major heat shock loci were identified by transcription autoradiography in Chironomus tentans: I-20A, II-16B, II-10C, II-4B, II-1C, III-12B, and IV-5C. Secondly, combining immunofluorescence with transcription autoradiography, I find RNA polymerase II occurring after heat shock at multiple chromosomal sit…

Hot TemperatureTranscription GeneticGenes InsectRNA polymerase IIBiologyChironomidaeChromosomesTranscription (biology)GeneticsTranscriptional regulationAnimalsHeat shockUridineHeat-Shock ProteinsGenetics (clinical)RibonucleoproteinHSPA14RNAMolecular biologyCell biologyHeat shock factorMicroscopy ElectronGene Expression RegulationRibonucleoproteinsbiology.proteinAutoradiographyRNA Polymerase IIChromosoma
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Long-Term Consequences of Water Pumping on the Ecosystem Functioning of Lake Sekšu, Latvia

2020

Cultural eutrophication, the process by which pollution due to human activity speeds up natural eutrophication, is a widespread and consequential issue. Here, we present the 85-year history of a small, initially Lobelia&ndash

INDICATORS0106 biological scienceslcsh:Hydraulic engineeringwater level fluctuationGeography Planning and DevelopmentDIAGENESISNorthern EuropeLEVEL FLUCTUATIONS01 natural sciencesBiochemistrylcsh:Water supply for domestic and industrial purposes:Geofag: 450 [VDP]CULTURAL EUTROPHICATION:Geosciences: 450 [VDP]Water Science and Technologybiologymulti-proxy approachPlanktonCladoceraSTATE6. Clean waterORGANIC-MATTEReutrophicationOceanographyCladocera1181 Ecology evolutionary biologyHypolimnionSEDIMENTS010506 paleontologyINDEXESAquatic ScienceChironomidaeHYPOLIMNETIC OXYGENdiatomslcsh:TC1-978Ecosystem14. Life underwater1172 Environmental sciences0105 earth and related environmental scienceslcsh:TD201-500010604 marine biology & hydrobiologyfungiSediment15. Life on landbiology.organism_classificationWater levelDiatom13. Climate actionEnvironmental scienceEutrophicationSOUTHERN FINLANDWater
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Fullerenes(nC60) affect the growth and development of the sediment-dwelling invertebrate Chironomus riparius larvae

2015

Abstract The possible toxicity of nanoparticles (NPs) to aquatic organisms needs to be investigated for chronic effects at low concentrations. Chronic effects of carbon NPs, fullerenesC60, on the midges of Chironomus riparius at different life stages on larvae and adult midges were investigated. Sediment associated fullerenesC60 were studied by 10-day growth and 42-day emergence tests with artificial sediment at nominal concentration ranges 0.0004–80 mg/kg dry weight. The body length decreased in the lower tested concentrations (0.0025–20 mg/kg), but the effect vanished with higher concentrations. Delayed emergence rate observed at 0.5 mg/kg. The observed effects correlated with analyzed se…

MaleGeologic SedimentshiiliHealth Toxicology and Mutagenesista1172ved/biology.organism_classification_rank.speciesPopulationmyrkyllisyysToxicologycarbon nanoparticleChironomidaeToxicologyDry weightAnimalssurviaissääsketeducationta116nanoecotoxicologyInvertebrateChironomus ripariusLarvaeducation.field_of_studyChironomus ripariusved/biologyChemistrySedimentGeneral MedicinePollutionekotoksikologiafullereenitBenthic zonenanotoxicityLarvaEnvironmental chemistryToxicitynanohiukkasetFemaleFullerenesWater Pollutants ChemicalEnvironmental Pollution
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Transposition of minisatellite-like DNA in Chironomus midges.

1994

Cla elements are a family of tandem repetitive DNA sequences present in the genome of several Chironomus species. Interspersed clusters of Cla elements are widely distributed all over the chromosomes in C. thummi thummi, while they seem to be limited to the centromeric regions in the closely related subspecies C. t. piger. Here we present molecular evidence that this differential distribution is due to a transposition of Cla elements during evolution of the C. t. thummi genome. We have cloned a "filled" integration site (containing a Cla element cluster) from C. t. thummi and the corresponding "empty" genomic site from C. t. piger and other related species. The comparison shows that tandem…

MaleMolecular Sequence DataMolecular evidenceGenes InsectSubspeciesDNA SatelliteGenomeChironomidaeTransposition (music)chemistry.chemical_compoundSpecies SpecificitySequence Homology Nucleic AcidGeneticsAnimalsCloning MolecularRepeated sequenceMolecular BiologyIn Situ HybridizationRepetitive Sequences Nucleic AcidGeneticsintegumentary systembiologyBase Sequencefood and beveragesGeneral Medicinebiology.organism_classificationMinisatellitechemistryDNA Transposable Elementslipids (amino acids peptides and proteins)ChironomusFemaleDNABiotechnologyGenome
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