Search results for "chlorophyta"

showing 10 items of 48 documents

From microbial eukaryotes to metazoan vertebrates: Wide spectrum paleo-diversity in sedimentary ancient DNA over the last ~14,500 years

2018

Most studies that utilize ancient DNA have focused on specific groups of organisms or even single species. Instead, the whole biodiversity of eukaryotes can be described using universal phylogenetic marker genes found within well-preserved sediment cores that cover the post-glacial period. Sedimentary ancient DNA samples from Lake Lielais Svētiņu, eastern Latvia, at a core depth of 1,050 cm in ~150 year intervals were used to determine phylotaxonomy in domain Eukaryota. Phylotaxonomic affiliation of >1,200 eukaryotic phylotypes revealed high richness in all major eukaryotic groups-Alveolata, Stramenopiles, Cercozoa, Chlorophyta, Charophyta, Nucletmycea, and Holozoa. The share of organisms t…

0106 biological sciences0301 basic medicineGeologic SedimentsBiodiversityChlorophyta010603 evolutionary biology01 natural sciences03 medical and health sciencesRNA Ribosomal 18SAnimals14. Life underwaterDNA AncientEcology Evolution Behavior and SystematicsGeneral Environmental ScienceTrophic levelbiologyEcologyLake ecosystemSequence Analysis DNA15. Life on landbiology.organism_classification030104 developmental biologyAncient DNAVertebratesPaleoecologyGeneral Earth and Planetary SciencesSpecies richnessCercozoaGeobiology
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The Role of Phospholipase D and MAPK Signaling Cascades in the Adaption of Lichen Microalgae to Desiccation: Changes in Membrane Lipids and Phosphopr…

2016

Classically, lichen phycobionts are described as poikilohydric organisms able to undergo desiccation due to the constitutive presence of molecular protection mechanisms. However, little is known about the induction of cellular responses in lichen phycobionts during drying. The analysis of the lipid composition of the desiccated lichen microalga Asterochloris erici revealed the unusual accumulation of highly polar lipids (oligogalactolipids and phosphatidylinositol), which prevents the fusion of membranes during stress, but also the active degradation of cone-shaped lipids (monogalactosyldiacylglycerol and phosphatidylethanolamine) to stabilize membranes in desiccated cells. The level of pho…

0106 biological sciences0301 basic medicineMAPK/ERK pathwayLichensPhysiologyMAP Kinase Signaling SystemMembrane lipidsPlant ScienceBiology01 natural sciencesDesiccation toleranceDephosphorylation03 medical and health scienceschemistry.chemical_compoundMembrane LipidsChlorophytaOsmotic PressureMicroalgaePhospholipase DPhosphorylationProtein kinase ADehydrationPhospholipase DKinaseCell BiologyGeneral MedicinePhosphatidic acidPhosphoproteinsAdaptation Physiological030104 developmental biologychemistryBiochemistrylipids (amino acids peptides and proteins)010606 plant biology & botanyPlantcell physiology
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Flashing light emitting diodes (LEDs) induce proteins, polyunsaturated fatty acids and pigments in three microalgae

2020

As the periodic emission of light pulses by light emitting diodes (LEDs) is known to stimulate growth or induce high value biocompounds in microalgae, this flashing light regime was tested on growth and biochemical composition of the microalgae Nannochloropsis gaditana, Koliella antarctica and Tetraselmis chui. At low flashing light frequencies (e.g., 5 and 50 Hz, Duty cycle = 0.05), a strain-dependent growth inhibition and an accumulation of protein, polyunsaturated fatty acids, chlorophyll or carotenoids (lutein, β-carotene, violaxanthin and neoxanthin) was observed. In addition, a 4-day application of low-frequency flashing light to concentrated cultures increased productivities of eicos…

0106 biological sciences0301 basic medicinePigmentsLuteinBio Process EngineeringTotal lipidsSettore ING-IND/25 - Impianti ChimiciBioengineering01 natural sciencesApplied Microbiology and Biotechnology03 medical and health scienceschemistry.chemical_compoundPigment:Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Plantefysiologi: 492 [VDP]NeoxanthinPulsed lightChlorophytaVDP::Teknologi: 500::Bioteknologi: 590010608 biotechnologyVDP::Technology: 500::Biotechnology: 590MicroalgaeFood scienceBiomassCarotenoidVLAGchemistry.chemical_classificationDuty cycleDuty cycle Pigments PUFA Pulsed light Total lipidsFatty Acidsfood and beveragesGeneral Medicine:Matematikk og Naturvitenskap: 400::Basale biofag: 470::Molekylærbiologi: 473 [VDP]Flashing030104 developmental biologychemistryChlorophyllvisual_artvisual_art.visual_art_mediumFatty Acids Unsaturated:Teknologi: 500::Bioteknologi: 590 [VDP]StramenopilesPUFABiotechnologyPolyunsaturated fatty acidViolaxanthin
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Formally described species woefully underrepresent phylogenetic diversity in the common lichen photobiont genus Trebouxia (Trebouxiophyceae, Chloroph…

2020

Lichens provide valuable systems for studying symbiotic interactions. In lichens, these interactions are frequently described in terms of availability, selectivity and specificity of the mycobionts and photobionts towards one another. The lichen-forming, green algal genus Trebouxia Puymaly is among the most widespread photobiont, associating with a broad range of lichen-forming fungi. To date, 29 species have been described, but studies consistently indicate that the vast majority of species-level lineages still lack formal description, and new, previously unrecognized lineages are frequently reported. To reappraise the diversity and the evolutionary relationships of species-level lineages …

0106 biological sciences0301 basic medicineTrebouxiaAlgaeLichensLichenBiologyHolobiont010603 evolutionary biology01 natural sciences03 medical and health sciencesstomatognathic systemSpecies SpecificityPhylogeneticsChlorophytaSpecies delimitationGeneticsAlgae; Biodiversity; Fungi; Holobiont; Multigene; Species delimitation; Symbiosis; Chlorophyta; Genetic Loci; Lichens; Species Specificity; Biodiversity; PhylogenySymbiosisLichenMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyGenetic diversityintegumentary systemTrebouxiophyceaeFungiBiodiversitybiology.organism_classificationHolobiontstomatognathic diseasesPhylogenetic diversity030104 developmental biologyEvolutionary biologyGenetic LociMultigeneTaxonomy (biology)SymbiosiMolecular phylogenetics and evolution
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Larger cell or colony size in winter, smaller in summer – a pattern shared by many species of Lake Kinneret phytoplankton

2017

We examined an 8.5-year record (2004-2012) of cell size data for phytoplankton species from Lake Kinneret, Israel, sampled weekly or at 2-week intervals and determined microscopically by the same person. Many of the species abundant enough to be counted year-round showed a typical seasonal cell size pattern that repeated annually: cell diameter was maximal in winter and minimal in summer. This pattern was shared by species from different taxonomic groups including cyanobacteria, chlorophyta, and dinoflagellates. Similarly, in colonial species of diatoms, chlorophyta, and cyanobacteria the number of cells per colony was larger in winter and smaller in summer. We postulated that the seasonal …

0106 biological sciencesCell diameterCyanobacteriabiologyEcology010604 marine biology & hydrobiologytemperaturesinking velocityChlorophytachlorophytaAquatic Sciencebiology.organism_classificationdinoflagellate010603 evolutionary biology01 natural sciencescyanobacteriaCell sizeReynolds numberseasonal Stokes' equationPhytoplanktonSettore BIO/03 - Botanica Ambientale E ApplicataWater densitychlorophyta; cyanobacteria; dinoflagellates; Reynolds number; sinking velocity; seasonal Stokes' equation; temperatureTaxonomic rankWater Science and Technology
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Improved Extraction Efficiency of Antioxidant Bioactive Compounds from Tetraselmis chuii and Phaedoactylum tricornutum Using Pulsed Electric Fields

2020

Pulsed electric fields (PEF) is a promising technology that allows the selective extraction of high-added value compounds by electroporation. Thus, PEF provides numerous opportunities for the energy efficient isolation of valuable microalgal bioactive substances (i.e., pigments and polyphenols). The efficiency of PEF-assisted extraction combined with aqueous or dimethyl sulfoxide (DMSO) solvents in recovering pigments and polyphenols from microalgae Tetraselmis chuii (T. chuii) and Phaeodactylum tricornutum (P. tricornutum) was evaluated. Two PEF treatments were applied: (1 kV/cm/400 pulses, 3 kV/cm/45 pulses), with a specific energy input of 100 kJ/kg. The total antioxidant capacity (TAC) …

0106 biological sciencesChlorophyll bAntioxidantmedicine.medical_treatmentPharmaceutical ScienceTetraselmis chuii01 natural sciencesPhaeodactylum tricornutumArticleAntioxidantsAnalytical Chemistrylcsh:QD241-441chemistry.chemical_compound0404 agricultural biotechnologylcsh:Organic chemistryChlorophyta010608 biotechnologyDrug DiscoverymedicineMicroalgaePhaeodactylum tricornutum<i>Phaeodactylum tricornutum</i>Physical and Theoretical ChemistryTetraselmis<i>Tetraselmis chuii</i>Carotenoidchemistry.chemical_classificationDiatomsChromatographybiologyChemistryDimethyl sulfoxideOrganic ChemistryExtraction (chemistry)Polyphenols04 agricultural and veterinary sciencesbiology.organism_classification040401 food science6. Clean waterElectroporationpulsed electric fieldsChemistry (miscellaneous)PolyphenolextractionMolecular Medicineantioxidant bioactive compoundsMolecules
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Epizoic Algae Distribution on the Carapace and Plastron of the European Pond Turtle (Emys orbicularis, Linnaeus, 1758): A Study from the Camargue, Fr…

2016

12 pages; International audience; We investigated epizoic algal assemblages on the shell of European pond turtles (Emys orbicularis) during two years (2013–2014). A total of 60 Emys orbicularis were captured in the three shallow Mediterranean wetlands located in Camargue. Epizoic algae on the plastron (below the shell) and carapace (above the shell) were sampled, identified and counted. Seventy-seven epizoic algal species were identified on the carapace and plastron and comprised in 51 Bacillariophyta, 11 Chlorophyta, 7 Cyanophyta, 6 Euglenophyta, 1 Dinophyta and1Xanthophyta taxa. Our findings indicated a distinct distribution of epizoic algae according to taxonomical group density; Chlorop…

0106 biological sciencesEmys orbicularisepibiontesCamarguePlant ScienceChlorophytaAquatic Sciencemarais temporairesEpizoic algae010603 evolutionary biology01 natural scienceslaw.inventionAlgaeGenuslaw[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosis14. Life underwaterCarapaceTurtle (robot)Ecology Evolution Behavior and SystematicsVaucheria[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyAlgues épizoiquesbiologyEmys orbicularisEcology010604 marine biology & hydrobiology15. Life on landbiology.organism_classificationplastronTaxonEpibiontsdossièretemporary wetland[SDE.BE]Environmental Sciences/Biodiversity and Ecologycarapace[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisCryptogamie, Algologie
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The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

2007

The smallest known eukaryotes, at ≈1-μm diameter, are Ostreococcus tauri and related species of marine phytoplankton. The genome of Ostreococcus lucimarinus has been completed and compared with that of O. tauri . This comparison reveals surprising differences across orthologous chromosomes in the two species from highly syntenic chromosomes in most cases to chromosomes with almost no similarity. Species divergence in these phytoplankton is occurring through multiple mechanisms acting differently on different chromosomes and likely including acquisition of new genes through horizontal gene transfer. We speculate that this latter process may be involved in altering the cell-surface character…

0106 biological sciencesGenome evolutionProtein familyGene Transfer Horizontal[SDV]Life Sciences [q-bio]Molecular Sequence DataBiologyEnvironment01 natural sciencesGenomeChromosomesOstreococcus tauriOstreococcus03 medical and health sciencesChlorophyta[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]SelenoproteinsGeneComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsCell Nucleus0303 health sciencesMultidisciplinaryMetal metabolismGenomeVitaminsBiological Sciencesbiology.organism_classificationPlanktonAdaptation PhysiologicalBiological EvolutionEukaryotic CellsMetalsHorizontal gene transfer010606 plant biology & botany
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Simultaneous determination of nine phytohormones in seaweed and algae extracts by HPLC-PDA.

2016

An RP-HPLC-PDA method for the simultaneous analysis of 9 compounds deriving from the phytohormones class was developed and optimized, namely indoleacetic acid (IAA), indolebutyric acid (IBA), phenyleacetic acid (PAA), naphtyleacetic acid (NAA), trans-zeatin (TZ), kinetin (KA), isopentenyladenine (IA), 6-benzylaminopurine (6-BA) and abscisic acid (ABA). Validation of the method was performed on the SFE-CO2 extract made out of the mixture of Baltic algae. The regression coefficients for plant hormones were in the range from 0.997 to 0.999. The LOD and LOQ were on the levels from 0.05–0.29 and 0.15–0.88 mg/L, respectively. Developed method was used for the separation and determination plant ho…

0106 biological sciencesSeaweed extractsClinical Biochemistry01 natural sciencesBiochemistryAnalytical ChemistrySFE-CO2 seaweed extractchemistry.chemical_compoundAlgaePlant Growth RegulatorsChlorophytaCladophora glomerataSpirulinaHplc pdaBiomassOrganic ChemicalsAbscisic acidChromatography High Pressure LiquidChromatography Reverse-PhaseChromatographybiology010401 analytical chemistryHormones levelsSolid Phase ExtractionSupercritical fluid extractionRP-HPLC-PDACell BiologyGeneral Medicinebiology.organism_classificationSeaweed0104 chemical sciencesPhytohormoneschemistryRegression AnalysisKinetinIndolebutyric Acid010606 plant biology & botanyJournal of chromatography. B, Analytical technologies in the biomedical and life sciences
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Thallus Growth Stage and Geographic Origin Shape Microalgal Diversity in Ramalina farinacea Lichen Holobionts

2021

Lichen symbioses are microecosystems hosting many other living organisms besides the two major lichen symbionts (i.e., lichenized fungi [the mycobiont] and green microalgae or cyanobacteria [the photobiont]). Recent investigations evidenced that other fungi, non-photosynthetic bacteria, and microalgae co-inhabit within the lichen thalli, but their diversity and their roles are still underinvestigated. Here we present an ad hoc stratified sampling design and in-depth Illumina paired-end metabarcoding approach to explore microalgal diversity in lichen thalli of the model species Ramalina farinacea from different ecologies. Lichen thalli were surveyed according to three different sizes, and di…

0106 biological sciencesTrebouxiaCyanobacteriasymbiosimycobiontLichensmedia_common.quotation_subjectLichenPlant ScienceAquatic Sciencehigh-throughput sequencing; metabarcoding; mycobiont; photobiont; symbiosis; Trebouxia; Symbiosis; Ascomycota; Chlorophyta; Lichens; Microalgae010603 evolutionary biology01 natural sciencesRamalina farinaceaSymbiosisAscomycotaChlorophytaBotanyMicroalgaeLichenSymbiosismedia_commonbiology010604 marine biology & hydrobiologyhigh-throughput sequencingbiology.organism_classificationThallusHabitatmetabarcodingTrebouxiaphotobiontDiversity (politics)
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