Search results for "classification"
showing 10 items of 29475 documents
Relationships between helminth communities and diet in Canarian lizards: the evidence from Gallotia atlantica (Squamata: Lacertidae)
2014
Diet and helminth fauna were analysed in the lizard Gallotia atlantica (Squamata: Lacertidae), the smallest species of this genus endemic to Lanzarote and Fuerteventura (Canary Islands), in an attempt to confirm previous claims of relationships between these ecological traits in this genus. A total of 70 lizards belonging to the subspecies atlantica (central southern Lanzarote), laurae (northern Lanzarote) and mahoratae (Fuerteventura) were examined. Compared with other Gallotia, the helminth fauna was impoverished, particularly in Fuerteventura, where the absence of larval cestodes suggests low predation pressure. Diet was omnivorous, the plant fraction (73.03–84.26%) included seeds and fr…
Fine-scale spatial genetic structure and gene dispersal in Silene latifolia
2010
Plants are sessile organisms, often characterized by limited dispersal. Seeds and pollen are the critical stages for gene flow. Here we investigate spatial genetic structure, gene dispersal and the relative contribution of pollen vs seed in the movement of genes in a stable metapopulation of the white campion Silene latifolia within its native range. This short-lived perennial plant is dioecious, has gravity-dispersed seeds and moth-mediated pollination. Direct measures of pollen dispersal suggested that large populations receive more pollen than small isolated populations and that most gene flow occurs within tens of meters. However, these studies were performed in the newly colonized rang…
Fine-scale spatial genetic dynamics over the life cycle of the tropical tree Prunus africana
2014
Studying fine-scale spatial genetic patterns across life stages is a powerful approach to identify ecological processes acting within tree populations. We investigated spatial genetic dynamics across five life stages in the insect-pollinated and vertebrate-dispersed tropical tree Prunus africana in Kakamega Forest, Kenya. Using six highly polymorphic microsatellite loci, we assessed genetic diversity and spatial genetic structure (SGS) from seed rain and seedlings, and different sapling stages to adult trees. We found significant SGS in all stages, potentially caused by limited seed dispersal and high recruitment rates in areas with high light availability. SGS decreased from seed and early…
Virus epidemics can lead to a population-wide spread of intragenomic parasites in a previously parasite-free asexual population
2014
Sexual reproduction is problematic to explain due to its costs, most notably the twofold cost of sex. Yet, sex has been suggested to be favourable in the presence of proliferating intragenomic parasites given that sexual recombination provides a mechanism to confine the accumulation of deleterious mutations. Kraaijeveld et al. compared recently the accumulation of transposons in sexually and asexually reproducing lines of the same species, the parasitoid wasp Leptopilina clavipes. They discovered that within asexually reproducing wasps, the number of gypsy-like retrotransposons was increased fourfold, whereas other retrotransposons were not. Interestingly, gypsy-like retrotransposons are cl…
The Arabidopsis PsbO2 protein regulates dephosphorylation and turnover of the photosystem II reaction centre D1 protein
2007
The extrinsic photosystem II (PSII) protein of 33 kDa (PsbO), which stabilizes the water-oxidizing complex, is represented in Arabidopsis thaliana (Arabidopsis) by two isoforms. Two T-DNA insertion ...
A new haemocyanin in cuttlefish (Sepia officinalis) eggs: sequence analysis and relevance during ontogeny
2014
Abstract Background Haemocyanin is the respiratory protein of most of the Mollusca. In cephalopods and gastropods at least two distinct isoforms are differentially expressed. However, their physiological purpose is unknown. For the common cuttlefish Sepia officinalis, three isoforms are known so far, whereas for only two of them the complete mRNA sequences are available. In this study, we sequenced the complete mRNA of the third haemocyanin isoform and measured the relative expression of all three isoforms during embryogenesis to reveal a potential ontogenetic relevance. Results The cDNA of isoform 3 clearly correlates to the known Sepia officinalis haemocyanin subunits consisting of eight …
High-Quality Genome Assembly and Annotation of the Big-Eye Mandarin Fish (Siniperca knerii)
2020
Abstract The big-eye mandarin fish (Siniperca knerii) is an endemic species of southern China. It belongs to the family Sinipercidae, which is closely related to the well-known North American sunfish family Centrarchidae. Determining the genome sequence of S. knerii would provide a foundation for better examining its genetic diversity and population history. A novel sequenced genome of the Sinipercidae also would help in comparative study of the Centrarchidae using Siniperca as a reference. Here, we determined the genome sequence of S. knerii using 10x Genomics technology and next-generation sequencing. Paired-end sequencing on a half lane of HiSeq X platform generated 56 Gbp of raw data. R…
Functional genomics of arbuscular mycorrhiza : decoding the symbiotic cell programme
2004
More extensive insight into plant genes involved in the symbiotic programme of arbuscular mycorrhiza is presently being achieved by global approaches that aim to discover novel genes or subsets of genes that are essential to cell programmes in the different steps of plantfungal interactions. The strategy of functional genomics based on large-scale differential RNA expression analyses (differential-display reverse transcriptase - PCR), electronic Northerns, suppressive subtractive hybridization, DNA chips) is presented, with a focus on arbuscular mycorrhiza in Pisum sativum and Medicago truncatula. The most recent knowledge about gene networks that are modulated in roots during arbuscular …
Anaerobic degradation of 2-propanol: Laboratory and pilot-scale studies
2017
Abstract The anaerobic degradation of 2-propanol, an important industrial solvent, was scaled-up from batch assays to a pilot expanded granular sludge bed (EGSB) reactor at 25 °C. Batch studies indicated that 2-propanol followed Haldane kinetics, with a maximum rate at 10 g COD L −1 . Concentrations as high as 25 g COD L −1 did not inhibit the degradation of ethanol, a common co-solvent. Similar specific methanogenic activities (SMA) were obtained for water-solvent and water-brewery sludges (88 and 77 ml CH 4 g-VS −1 d −1 at 5 g COD L −1 ). Continuous degradation showed a lag-phase of three weeks with water-brewery sludge. Increases in 2-propanol load from 0.05 to 0.18 kg COD kg-VS −1 d …
Structural and Mechanical Modification Induced by Water Content in Giant Wild Reed (A. donax L.)
2018
Giant wild reed Arundo donax L. is an aggressive agricultural species with remarkable features such as fast-growing, untapped economic potential, eco-friendliness, and high specific properties (e.g., high strength/weight and modulus/weight ratios). Here, the bending properties of giant reed were studied at a molecular level to evaluate the effect of the conditions used during the preparation for their applications (also referred to as treatment conditions). The aim was to achieve new information potentially useful to suggest new possible applications of A. donax L. for structural applications in modern buildings. In this study, green reeds collected in a Sicilian plantation were dried for 2…