Search results for "colonisation"

showing 10 items of 87 documents

Colonisation and diversification of the Zenaida dove (Zenaida aurita) in the Antilles: phylogeography, contemporary gene flow and morphological diver…

2013

12 pages; International audience; Caribbean avifaunal biogeography has been mainly studied based on mitochondrial DNA. Here, we investigated both past and recent island differentiation and micro-evolutionary changes in the Zenaida Dove (Zenaida aurita) based on combined information from one mitochondrial (Cytochrome c Oxydase subunit I, COI) and 13 microsatellite markers and four morphological characters. This Caribbean endemic and abundant species has a large distribution, and two subspecies are supposed to occur: Z. a. zenaida in the Greater Antilles (GA) and Z. a. aurita in the Lesser Antilles (LA). Doves were sampled on two GA islands (Puerto Rico and the British Virgin Islands) and six…

0106 biological sciencesZenaida auritaGene FlowBiogeographyPopulation DynamicsZoologyPopulation geneticslcsh:MedicineSubspecies[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA MitochondrialElectron Transport Complex IV03 medical and health sciencesAnimalsCluster Analysis14. Life underwaterlcsh:ScienceColumbidae030304 developmental biologyIsolation by distanceIslands0303 health sciencesAnalysis of Variance[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinarybiologyBase SequenceEcologylcsh:RBody WeightGenetic VariationBiodiversitybiology.organism_classificationColonisationPhylogeographyPhylogeographyCaribbean RegionHaplotypeslcsh:QAnimal Migration[SDE.BE]Environmental Sciences/Biodiversity and EcologyMartinique[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyResearch ArticleMicrosatellite Repeats
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New insight into the colonization processes of common voles: inferences from molecular and fossil evidence.

2008

Biologie et Gestion des Populations, Campus International de Baillarguet, Montferrier/Lez, FranceElucidating the colonization processes associated with Quaternary climatic cycles is important in order to understand the distribution of biodiversity and the evolutionary potential of temperate plant and animal species. In Europe, general evolutionary scenarios have been defined from genetic evidence. Recently, these scenarios have been challenged with genetic as well as fossil data. The origins of the modern distributions of most temperate plant and animal species could predate the Last Glacial Maximum. The glacial survival of such populations may have occurred in either southern (Mediterranea…

0106 biological sciences[ SDE.BE.BIOD ] Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biodBiodiversitylcsh:Medicine[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesbiodiversitéEvolutionary Biology/Animal GeneticsMaximum-LikelihoodControl RegionGlacial periodévolutionlcsh:SciencePhylogenyévolution biologiqueMismatch Distributionchangement climatique0303 health sciencesMultidisciplinarybiologyArvicolinaeFossilsEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]mammifèreFossil RecordCytochromes bEuropePhylogeographyHabitatResearch ArticleEvolutionary Biology/PaleontologyGene FlowClimatic ChangesGenetic SpeciationcolonisationMolecular DatingCytochrome b010603 evolutionary biologyQuaternary03 medical and health sciencesAnimalsMicrotusDemography030304 developmental biologyBayesian ApproachEvolutionary Biology/Evolutionary and Comparative GeneticsrongeurHuman evolutionary geneticslcsh:RGenetic Variation[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologySequence Analysis DNAmicrotus arvalis15. Life on landbiology.organism_classificationBiogeographic TraitsPhylogeographyGenetic SpeciationBiological dispersalAnimal Migrationlcsh:QCommon Vole
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The mycorrhizal soil infectivity and arbuscular mycorrhizal fungal spore communities in soils of different aged fallows in Senegal

2001

This work was carried out to determine the influence of the duration of fallow and of physico-chemical components of soils on the distribution of endomycorrhizal fungal spores and the mycorrhizal soil infectivity. The mycorrhization of indigenous plants from the fallows was examined and it was concluded that, except for Cassia obtusifolia, fungal colonization was poorly developed. No correlation was established between spore populations and duration of fallow or between grazed and fenced areas. The relationships between abundance of mycorrhizal spores and the physico-chemical characteristics of the soils were markedly variable among species of mycorrhizal fungi. The results did not provide …

0106 biological sciences[SDE] Environmental SciencesCARACTERISTIQUE PHYSIQUESoil biology[SDV]Life Sciences [q-bio]Soil Science01 natural sciencesCHAMPIGNONSTRUCTURE DU SOLBotanyColonizationMycorrhizaGlomusComputingMilieux_MISCELLANEOUSCARACTERISTIQUE CHIMIQUEANALYSE STATISTIQUEPOTENTIEL INFECTIEUX MYCORHIZOGENE DU SOLEcologybiologyENDOMYCORHIZEfungi04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)SporeJACHEREColonisationArbuscular mycorrhiza[SDV] Life Sciences [q-bio]AgronomySoil water[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesMYCORHIZERELATION SOL PLANTE010606 plant biology & botany
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Spatio-temporal dynamics of density-dependent dispersal during a population colonisation

2019

Predicting population colonisations requires understanding how spatio‐temporal changes in density affect dispersal. Density can inform on fitness prospects, acting as a cue for either habitat quality, or competition over resources. However, when escaping competition, high local density should only increase emigration if lower‐density patches are available elsewhere. Few empirical studies on dispersal have considered the effects of density at the local and landscape scale simultaneously. To explore this, we analyze 5 years of individual‐based data from an experimental introduction of wild guppies Poecilia reticulata. Natal dispersal showed a decrease in local density dependence as density at…

0106 biological sciencesmedia_common.quotation_subjectPoecilia reticulataPopulationPopulation DynamicstranslocationBiology010603 evolutionary biology01 natural sciencesCompetition (biology)populaatiotAnimalseducationrapid evolutionEcology Evolution Behavior and SystematicsEcosystemkinshipComputingMilieux_MISCELLANEOUSmedia_commonPopulation Densityeducation.field_of_studybreeding dispersalmaastamuuttoEcology010604 marine biology & hydrobiologybiology.organism_classificationAttractionpopulaatiodynamiikkaindividual-based dataColonisationPoeciliaDensity dependenceHabitatslope of density dependencesukulaisuus[SDE]Environmental SciencesBiological dispersalta1181landscape scaleAnimal Migrationemigrationmovement[SDE.BE]Environmental Sciences/Biodiversity and Ecologyhammaskarpitleviäminen
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Symbiosis between river and dry lands: phycobiont dynamics on river gravel bars

2020

AbstractRiver gravel bars are dynamic and heterogeneous habitats standing on transition between aquatic and terrestrial environment. Periodical flooding, low nutrient content, frost, missing safe sites, drought, and heat on the ground surface significantly influence life in these habitats. Mutualistic symbiosis may be a successful strategy for organisms to survive and to proliferate under harsh conditions. The lichen genus Stereocaulon was selected as a model symbiotic system among the organisms living on river gravel bars. The aim of our work was to determine effect of this dynamic environment on a phycobiont (i.e., green eukaryotic photobiont) community structure. We analysed 147 Stereoca…

0301 basic medicine0106 biological sciencesfood.ingredientEcological succession010603 evolutionary biology01 natural sciences03 medical and health sciencesfoodAlgaeSymbiosisBotanyInternal transcribed spacerLichen030304 developmental biology0303 health sciencesbiologyEcologyStereocaulonCommunity structureBiota15. Life on landbiology.organism_classificationThallusColonisation030104 developmental biology13. Climate actionAgronomy and Crop Science
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Parasitic wasp-associated symbiont affects plant-mediated species interactions between herbivores

2018

Abstract Microbial mutualistic symbiosis is increasingly recognised as a hidden driving force in the ecology of plant–insect interactions. Although plant-associated and herbivore-associated symbionts clearly affect interactions between plants and herbivores, the effects of symbionts associated with higher trophic levels has been largely overlooked. At the third-trophic level, parasitic wasps are a common group of insects that can inject symbiotic viruses (polydnaviruses) and venom into their herbivorous hosts to support parasitoid offspring development. Here, we show that such third-trophic level symbionts act in combination with venom to affect plant-mediated interactions by reducing colon…

0301 basic medicineHerbivore colonisationInsecta[SDV]Life Sciences [q-bio]tritrophic interactionWaspsVenomParasitoidchenilleLaboratory of EntomologyTrophic levelbiologyEcologyPolydnavirusHost-Parasite Interactionfood and beveragesplant–insect interactionsHerbivore colonisation parasitoid plant–insect interactions polydnaviruses tritrophic interactionsPE&RCsymbiosisParasiteinternationalpolydnaviruse[SDE]Environmental Sciencespolydnavirussymbioseécologie des populationsinteraction plante insecteherbivoreplant–insect interactionHost-Parasite Interactions03 medical and health sciencesSymbiosisAnimalsParasitesHerbivoryguêpeCaterpillarparasitoidEcology Evolution Behavior and SystematicsHerbivoreAnimaltritrophic interactionsfungi15. Life on landplant-insect interactionsLaboratorium voor Entomologiebiology.organism_classificationplant insect interactionherbivore colonisationpolydnavirusesColonisationSettore AGR/11 - Entomologia Generale E Applicata030104 developmental biologycaterpillarEPS
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Characteristics and Management of Candidaemia Episodes in an Established Candida auris Outbreak

2020

The multi-resistant yeast Candida auris has become a global public health threat because of its ease to persist and spread in clinical environments, especially in intensive care units. One of the most severe manifestations of invasive candidiasis is candidaemia, whose epidemiology has evolved to more resistant non-albicansCandida species, such as C. auris. It is crucial to establish infection control policies in order to control an outbreak due to nosocomial pathogens, including the implementation of screening colonisation studies. We describe here our experience in managing a C. auris outbreak lasting more than two and a half years which, despite our efforts in establishing control measure…

0301 basic medicineMicrobiology (medical)medicine.medical_specialty<i>Candida auris</i>colonisation030106 microbiologymultidrug-resistantyeastBiochemistryMicrobiology03 medical and health sciences0302 clinical medicineInternal medicineIntensive careAmphotericin BEpidemiologyInfection controlMedicinecandidaemiaPharmacology (medical)030212 general & internal medicineGeneral Pharmacology Toxicology and Pharmaceuticsoutbreakbusiness.industryMortality ratelcsh:RM1-950Outbreaklcsh:Therapeutics. PharmacologyInfectious DiseasesCandida aurissurveillancefungibusinessFluconazolemedicine.drugAntibiotics
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Dextran production by Lactobacillus sakei MN1 coincides with reduced autoagglutination, biofilm formation and epithelial cell adhesion

2017

40 p.-7 fig.-4 fig.supl.

0301 basic medicineVibrio anguillarumPolymers and Plastics030106 microbiologyBacterial AdhesionMicrobiology03 medical and health scienceschemistry.chemical_compoundLatilactobacillus sakeiMaterials ChemistryLactic acid bacteriaAnimalsVibrio anguillarumDextranZebrafish modelsZebrafishAutoagglutinationbiologyOrganic ChemistryBiofilmfood and beveragesDextransEpithelial CellsColonisationbiology.organism_classificationLactobacillus sakeiLactic acidMeat Products030104 developmental biologyDextranBiochemistrychemistryLeuconostoc mesenteroidesBiofilmsFermentationFermented FoodsFish probioticsBacteria
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Systematic gene overexpression in Candida albicans identifies a regulator of early adaptation to the mammalian gut.

2018

International audience; Candida albicans is part of the human gastrointestinal (GI) microbiota. To better understand how C. albicans efficiently establishes GI colonisation, we competitively challenged growth of 572 signature-tagged strains (~10% genome coverage), each conditionally overexpressing a single gene, in the murine gut. We identified CRZ2, a transcription factor whose overexpression and deletion respectively increased and decreased early GI colonisation. Using clues from genome-wide expression and gene-set enrichment analyses, we found that the optimal activity of Crz2p occurs under hypoxia at 37°C, as evidenced by both phenotypic and transcriptomic analyses following CRZ2 geneti…

0301 basic medicine[SDV.MHEP.AHA] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO]030106 microbiologyImmunologyMicrobiologyMannosyltransferasesBiological pathwayTranscriptomeFungal ProteinsMannans03 medical and health scienceschemistry.chemical_compoundtranscriptomicsregulatory networksCell WallVirologyGene Expression Regulation FungalCandida albicanssignature‐tagged overexpression[SDV.MHEP.AHA]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO]AnimalsGene Regulatory NetworksCandida albicansPromoter Regions GeneticGeneTranscription factorResearch ArticlesFungal proteinMice Inbred BALB CCRZ2chromatin immunoprecipitation‐on‐chipbiologyCRZ2;Candida albicans;chromatin immunoprecipitation-on-chip;gastrointestinal colonisation;regulatory networks;signature-tagged overexpression;transcriptomicsTunicamycinTunicamycinHydrogen-Ion Concentrationbiology.organism_classificationPhenotypeCell biologyGastrointestinal MicrobiomeGastrointestinal Tractchemistrychromatin immunoprecipitation-on-chipFemalesignature-tagged overexpressionMicroorganisms Genetically-Modifiedgastrointestinal colonisationResearch Article
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Prevalence of Extended Spectrum Beta Lactamase Producing Bacteria in Two Surgical Wards of a General Hospital

2019

Abstract Colonisation of gastrointestinal tract by extended spectrum beta lactamase (ESBL)-producing Gram-negative bacteria is a source for infections. The present work is a prospective study in Latvia aimed to determine the role of two surgical profile wards in transmission of ESBL-producing bacteria. Differences between hospital wards were not analysed due to low number of patients. We have also determined a correlation between the duration of hospitalisation and risk of ESBL colonisation. Tests for ESBL-producing bacteria were made twice for 136 patients — upon admission and upon discharge from the hospital. Of them, 21 (15.4%) patients already were ESBL-positive at the time of admission…

0301 basic medicineesblMultidisciplinarybiologygut microbiotabusiness.industrymedicine.medical_treatmentScience030106 microbiologyQbiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycosesMicrobiology03 medical and health sciences0302 clinical medicineBeta-lactamasemedicinepolycyclic compoundsbacteria030212 general & internal medicineGeneral hospitalbusinessBacteriabacterial colonisationProceedings of the Latvian Academy of Sciences. Section B, Natural Sciences
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