Search results for "computer.software_genre"

Unveiling Bacterial Interactions through Multidimensional Scaling and Dynamics Modeling

2015

AbstractWe propose a new strategy to identify and visualize bacterial consortia by conducting replicated culturing of environmental samples coupled with high-throughput sequencing and multidimensional scaling analysis, followed by identification of bacteria-bacteria correlations and interactions. We conducted a proof of concept assay with pine-tree resin-based media in ten replicates, which allowed detecting and visualizing dynamical bacterial associations in the form of statistically significant and yet biologically relevant bacterial consortia.

Consistency Analysis of Genome-Scale Models of Bacterial Metabolism: A Metamodel Approach.

2015

Genome-scale metabolic models usually contain inconsistencies that manifest as blocked reactions and gap metabolites. With the purpose to detect recurrent inconsistencies in metabolic models, a large-scale analysis was performed using a previously published dataset of 130 genome-scale models. The results showed that a large number of reactions (~22%) are blocked in all the models where they are present. To unravel the nature of such inconsistencies a metamodel was construed by joining the 130 models in a single network. This metamodel was manually curated using the unconnected modules approach, and then, it was used as a reference network to perform a gap-filling on each individual genome-s…

2021

Data collected in criminal investigations may suffer from issues like: (i) incompleteness, due to the covert nature of criminal organizations; (ii) incorrectness, caused by either unintentional data collection errors or intentional deception by criminals; (iii) inconsistency, when the same information is collected into law enforcement databases multiple times, or in different formats. In this paper we analyze nine real criminal networks of different nature (i.e., Mafia networks, criminal street gangs and terrorist organizations) in order to quantify the impact of incomplete data, and to determine which network type is most affected by it. The networks are firstly pruned using two specific m…

US scorn for treaties hasn't improved nuclear security

2006

2019

The link between colour and emotion and its possible similarity across cultures are questions that have not been fully resolved. Online, 711 participants from China, Germany, Greece and the UK associated 12 colour terms with 20 discrete emotion terms in their native languages. We propose a machine learning approach to quantify (a) the consistency and specificity of colour–emotion associations and (b) the degree to which they are country-specific, on the basis of the accuracy of a statistical classifier in (a) decoding the colour term evaluated on a given trial from the 20 ratings of colour–emotion associations and (b) predicting the country of origin from the 240 individual colour–emotion a…

2015

We present a method to discover discriminative brain metabolism patterns in [18F] fluorodeoxyglucose positron emission tomography (PET) scans, facilitating the clinical diagnosis of Alzheimer's disease. In the work, the term "pattern" stands for a certain brain region that characterizes a target group of patients and can be used for a classification as well as interpretation purposes. Thus, it can be understood as a so-called "region of interest (ROI)". In the literature, an ROI is often found by a given brain atlas that defines a number of brain regions, which corresponds to an anatomical approach. The present work introduces a semi-data-driven approach that is based on learning the charac…

Predictability and prediction of lowest observed adverse effect levels in a structurally heterogeneous set of chemicals

2005

A database of chronic lowest observed adverse effect levels (LOAELs) for 234 compounds, previously compiled from different sources (Toxicology Letters79, 131-143 (1995)), was modelled using graph theoretical descriptors. This study reveals that data are not homogeneous. Only those data originating from the U.S. Environmental Protection Agency (EPA) reports could be well modelled by multilinear regression (MLR) and linear discriminant analysis (LDA). In contrast, data available from the specific procedures of the National Toxicology Program (NTP) database introduced noise and did not render good models either alone, or in combination with the EPA data.

Metadata-Oriented Language Model in Translingual Retrieval of Digital Data

2015

Translingual retrieval relies on processing a source language to retrieve digital document content in a target language. From the perspective of successful browsing digital catalogues, probability of retrieving the full text document in a language other than the query language is close to zero owning to the fact that it is not only the library collection, but especially a problem of matching the index terms with the query keywords which are assumed to be their translation equivalents. In addition, hardly any digital library system is incorporated with a translation component. As a result, such a matching is rather coincidental. Our approach to the translingual document retrieval problem is …

Forecasting future trajectories for immersive journalism

2021

In this book we have critically explored the emerging practices of immersive journalism. In the news business, experimenting with new forms of storytelling has become the new normal. After spending a decade to get familiar with simple virtual reality tools, however, the future of immersive journalism is still considered uncertain. Immersive storytelling appears to become more concentrated on special events and locations. Journalistic virtual reality skills are increasingly crafted away from the newsrooms by small and specialized subcontractors. Sponsoring VR by the big tech companies tends to diminish in parallel with a growing move towards augmented reality investments. peerReviewed

A Neural Network-Based Algorithm for 3D Multispectral Scanning Applied to Multimedia

2005

We describe a new stereoscopic system based on a multispectral camera and an LCD-Projector. The novel concept we want to show consists in the use of multispectral information for 3D-scenes reconstruction. Each 3D point is linked to a curve representing the spectral reflectance. This latter is a physical representation of the matter and presents the advantage over color information, which is perceptual, that it is independent from both illuminant and observer. We first present an easy methodology to geometrically and spectrally calibrate such a system. We then describe an algorithm for recovering 3D coordinates based on triangulation and an algorithm for reflectance curves reconstruction bas…