Search results for "computer"

showing 10 items of 30657 documents

How Long Is Too Long in Contemporary Peer Review? Perspectives from Authors Publishing in Conservation Biology Journals

2015

Delays in peer reviewed publication may have consequences for both assessment of scientific prowess in academics as well as communication of important information to the knowledge receptor community. We present an analysis on the perspectives of authors publishing in conservation biology journals regarding their opinions on the importance of speed in peer-review as well as how to improve review times. Authors were invited to take part in an online questionnaire, of which the data was subjected to both qualitative (open coding, categorizing) and quantitative analyses (generalized linear models). We received 637 responses to a total of 6,547 e-mail invitations sent. Peer-review speed was gene…

0106 biological sciencesPersistence (psychology)GerontologyMedical educationMultidisciplinarybusiness.industryPrestigelcsh:Reducationlcsh:MedicineComputer-assisted web interviewingBibliometrics010603 evolutionary biology01 natural sciencesPeer reviewCompetition (economics)03 medical and health sciences0302 clinical medicinePublishingMedicinelcsh:Q030212 general & internal medicineChemistry (relationship)lcsh:SciencebusinessPLOS ONE
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Bayesian spatio-temporal discard model in a demersal trawl fishery

2014

Spatial management of discards has recently been proposed as a useful tool for the protection of juveniles, by reducing discard rates and can be used as a buffer against management errors and recruitment failure. In this study Bayesian hierarchical spatial models have been used to analyze about 440 trawl fishing operations of two different metiers, sampled between 2009 and 2012, in order to improve our understanding of factors that influence the quantity of discards and to identify their spatio-temporal distribution in the study area. Our analysis showed that the relative importance of each variable was different for each metier, with a few similarities. In particular, the random vessel eff…

0106 biological sciencesPerteSpatial correlationhttp://aims.fao.org/aos/agrovoc/c_28840Computer scienceProcess (engineering)Bayesian probabilitySede Central IEOAquatic ScienceOceanography01 natural sciencesRessource halieutiquehttp://aims.fao.org/aos/agrovoc/c_2173Abundance (ecology)Component (UML)http://aims.fao.org/aos/agrovoc/c_4438Pesquerías14. Life underwaterM11 - Production de la pêchehttp://aims.fao.org/aos/agrovoc/c_7881Ecology Evolution Behavior and SystematicsChalutageU10 - Informatique mathématiques et statistiques010604 marine biology & hydrobiologyhttp://aims.fao.org/aos/agrovoc/c_2801204 agricultural and veterinary sciencesDiscardsFisheryRessource marineVariable (computer science)Théorie bayésienneM40 - Écologie aquatique040102 fisheries0401 agriculture forestry and fisherieshttp://aims.fao.org/aos/agrovoc/c_2942Fisheries managementPêche démersale
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The grapevine flagellin receptor VvFLS2 differentially recognizes flagellin-derived epitopes from the endophytic growth-promoting bacterium Burkholde…

2014

International audience; The role of flagellin perception in the context of plant beneficial bacteria still remains unclear. Here, we characterized the flagellin sensing system flg22-FLAGELLIN SENSING 2 (FLS2) in grapevine, and analyzed the flagellin perception in the interaction with the endophytic plant growth-promoting rhizobacterium (PGPR) Burkholderia phytofirmans. The functionality of the grapevine FLS2 receptor, VvFLS2, was demonstrated by complementation assays in the Arabidopsis thaliana fls2 mutant, which restored flg22-induced H2O2 production and growth inhibition. Using synthetic flg22 peptides from different bacterial origins, we compared recognition specificities between VvFLS2…

0106 biological sciencesPhysiologyBurkholderia phytofirmans[SDV]Life Sciences [q-bio]flg22ArabidopsisColony Count MicrobialPlant Sciencemedicine.disease_cause01 natural sciencesEpitopesArabidopsisEndophytesArabidopsis thalianaPlant ImmunityVitisDisease ResistancePlant Proteins0303 health sciencesbiologyBurkholderia phytofirmansmicrobe-associated molecular pattern (MAMP)Xanthomonas campestrisPGPR[SDE]Environmental SciencesBotrytispattern recognition receptor (PRR)BurkholderiaMolecular Sequence DataContext (language use)Receptors Cell SurfaceMicrobiology03 medical and health sciencesSpecies Specificitymedicine[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyComputer SimulationAmino Acid Sequenceflagellin sensing030304 developmental biologyPlant DiseasesfungiCell MembraneGenetic Complementation TestPathogenic bacteriabiology.organism_classificationVitis viniferaMutationbiology.proteinReactive Oxygen SpeciesFlagellinBacteria010606 plant biology & botanyFlagellinThe New phytologistReferences
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Permanent genetic resources added to molecular ecology resources database 1 April 2010 - 31 May 2010

2010

Correspondance: Molecular Ecology Resources Primer Development Consortium, E-mail: editorial.office@molecol.com; International audience; This article documents the addition of 396 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Anthocidaris crassispina, Aphis glycines, Argyrosomus regius, Astrocaryum sciophilum, Dasypus novemcinctus, Delomys sublineatus, Dermatemys mawii, Fundulus heteroclitus,Homalaspis plana, Jumellea rossii, Khaya senegalensis, Mugil cephalus, Neoceratitis cyanescens, Phalacrocorax aristotelis, Phytophthora infestans, Piper cordulatum, Pterocarpus indicus, Rana dalmatina, Rosa pulverulenta, Saxifraga …

0106 biological sciencesPiper marginatumPHYLOGENYSemecarpusMOLECULAR MARKERSECOLOGYcomputer.software_genre010603 evolutionary biology01 natural sciences03 medical and health sciencesLaboratorium voor PlantenveredelingRana ibericaREFERENCEMENTSPECIESPOPULATION GENETICSGENBANKBotanyGeneticsLife ScienceMICROSATELLITE MARKERmicrosatellite marker databasePiper cordulatumEcology Evolution Behavior and Systematics030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyDatabaseEPS-2Bioint Moleculair PhytopathologyTAXONOMY15. Life on landL10 - Génétique et amélioration des animauxbiology.organism_classificationJumelleaLaboratorium voor PhytopathologieFundulusPlant BreedingINSECTEMOLECULAR ECOLOGY RESOURCE DATABASECATALOGUELaboratory of PhytopathologyFundulus olivaceusJumellea rectaL20 - Écologie animaleGENETIQUE DES POPULATIONScomputerECOLOGIEBiotechnology
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Antarctic and Sub-Antarctic Asteroidea database

2018

The present dataset is a compilation of georeferenced occurrences of asteroids (Echinodermata: Asteroidea) in the Southern Ocean. Occurrence data south of 45°S latitude were mined from various sources together with information regarding the taxonomy, the sampling source and sampling sites when available. Records from 1872 to 2016 were thoroughly checked to ensure the quality of a dataset that reaches a total of 13,840 occurrences from 4,580 unique sampling events. Information regarding the reproductive strategy (brooders vs. broadcasters) of 63 species is also made available. This dataset represents the most exhaustive occurrence database on Antarctic and Sub-Antarctic asteroids.

0106 biological sciencesPresence-only dataSciences et médecine vétérinairesReproductive strategyOccurrence data[SDV.BID]Life Sciences [q-bio]/BiodiversityEvolution des espècescomputer.software_genre010603 evolutionary biology01 natural sciencesLatitudeAsteroideaData analysis & Modellinglcsh:ZoologyAnimalia14. Life underwaterlcsh:QL1-991Southern OceanEcology Evolution Behavior and SystematicsInvertebrata[ SDV.BID ] Life Sciences [q-bio]/Biodiversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologySub-AntarcticDatabaseEcologie010604 marine biology & hydrobiologySampling (statistics)Sub antarcticGeographyBiogeographyAntarctic Asteroidea Presence-only data Southern Ocean Sub-AntarcticGeoreferenceAnimal Science and ZoologyAntarctic[SDE.BE]Environmental Sciences/Biodiversity and Ecologypresence-only dataPolarcomputerData PaperEchinodermataZooKeys
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Eco-geomorphological connectivity and coupling interactions at hillslope scale in drylands: Concepts and critical examples

2020

The diagnosis of land degradation requires a deep understanding of ecosystem functioning and evolution. In dryland systems, in particular, research efforts must address the redistribution of scarce resources for vegetation, in a context of high spatial heterogeneity and non-linear response. This fact explains the prevalence of eco-hydrological perspectives interested in runoff processes and, the more recent, focused on connectivity as an indicator of system resource optimisation. From a geomorphological perspective and reviewing the concepts of eco-hydro-geomorphological interactions operating in ecosystems, this paper explores the effects of erosion on vegetation configuration through two …

0106 biological sciencesProcess-patternGeospatial analysis010504 meteorology & atmospheric sciencesContext (language use)computer.software_genre010603 evolutionary biology01 natural sciencesFeedbackEcosystemSoil surface armouringEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesEarth-Surface ProcessesRunoff connectivityEcologybusiness.industryScale (chemistry)Environmental resource managementVegetationHillslope-channel couplingScaleSpatial heterogeneityLand degradationEnvironmental sciencebusinessSurface runoffcomputerGeografiaJournal of Arid Environments
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Images are not and should not ever be type specimens: a rebuttal to GarraffoniFreitas.

2017

Note. This original form of this rebuttal was submitted to Science on 3 March 2017 (limited to 300 words as per Science editorial policy) but rejected on 13 March 2017. Herein, we elaborate on our original Science submission in order to more fully address the issue without the length limitations. This rebuttal is followed by the list of the signatories who supported our original submission.

0106 biological sciencesProgramming languageRebuttaleducationType specimens010607 zoologySettore BIO/05 - ZoologiaBiologycomputer.software_genre010603 evolutionary biology01 natural sciencesType (biology)Order (business)Code (cryptography)ImagesPhotographyAnimalsAnimal Science and ZoologycomputerBiological sciencesZoologyEcology Evolution Behavior and SystematicsZootaxa
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The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

0106 biological sciencesProtein domainretroelementsLineage (evolution)[SDV]Life Sciences [q-bio]Retroviridae ProteinsCaulimoviridaeEukaryote evolutioncomputer.software_genrephylogeny01 natural sciencesDatabases GeneticRefSeqPhylogenyPriority journalbase de données0303 health sciencesRetrovirusPhylogenetic treeDatabaseSequence analysisdatabases geneticArticlesClassificationChemistryGenetic lineRetroelementsGenetic databaseComputer programBiologyArticleMobile genetic element03 medical and health sciencesLong terminal repeatWeb pagephylogénieVirus proteinGeneticsLife Science[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAccess to informationTransposon030304 developmental biologyretroelements;phylogeny;software;terminal repeat sequences;databases geneticHidden Markov modelCauliflower mosaic virusCaulimovirussoftwareRetroposonTerminal Repeat SequencesDNA structureInterspersed Repetitive Sequencesterminal repeat sequencesNonhumanRetroviridaeData analysis softwareGenetic variabilityMobile genetic elementscomputerLENGUAJES Y SISTEMAS INFORMATICOSSoftware010606 plant biology & botanyPhylogenetic nomenclaturePhylogenetic tree
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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Identifying potential areas of expansion for the endangered brown bear (Ursus arctos) population in the cantabrian mountains (NW Spain)

2019

Many large carnivore populations are expanding into human-modified landscapes and the subsequent increase in coexistence between humans and large carnivores may intensify various types of conflicts. A proactive management approach is critical to successful mitigation of such conflicts. The Cantabrian Mountains in Northern Spain are home to the last remaining native brown bear (Ursus arctos) population of the Iberian Peninsula, which is also amongst the most severely threatened European populations, with an important core group residing in the province of Asturias. There are indications that this small population is demographically expanding its range. The identification of the potential are…

0106 biological sciencesRange (biology)Endangered speciesForests01 natural sciencesGeographical locationsPeninsulaGeoinformaticsUrsusCarnivoreConservation ScienceMammalseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryEcologyGeographybiologyEcologyQREukaryotaTerrestrial EnvironmentsSpatial AutocorrelationCarnivoryTrophic InteractionsHabitatsEuropeCommunity EcologyHabitatVertebratesMedicineUrsidaeResearch ArticleComputer and Information SciencesSciencePopulationBears010603 evolutionary biologyEcosystemsPopulation MetricsAnimalsHumansEuropean Union14. Life underwatereducationEcosystemPopulation DensitygeographyPopulation Biology010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsBiology and Life Sciences15. Life on landbiology.organism_classificationSpainAmniotesThreatened speciesEarth SciencesPeople and places
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