Search results for "distribution"

showing 10 items of 6008 documents

The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

2020

Background: Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks tolerant to other stressors such as pathogens and climate change. Limited understanding of the insect genetics resulted in successive outbreaks across the globe when rootstocks failed. Here we report the 294-Mb genome of D. vitifoliae as a basic tool to understand host plant manipulation, nutritional endosymbiosis, and enhance global viticulture. Results: Using a combination of…

0106 biological sciencesFil·loxeraPhysiology[SDV]Life Sciences [q-bio]Introduced speciesPlant Science01 natural sciencesGenomeGene duplicationsStructural BiologyVitislcsh:QH301-705.5ComputingMilieux_MISCELLANEOUS2. Zero hunger0303 health scienceseducation.field_of_studyHost plant interactionsGenomeEndosymbiosisbiologyfood and beveragesBiological SciencesBiological EvolutionGeneral Agricultural and Biological SciencesRootstockInfectionDaktulosphaira vitifoliaeBiotechnologyResearch ArticlePopulation010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyHemiptera03 medical and health sciencesGeneticsInsect pestsAnimalsPlagues d'insectesAdaptationBiological invasionsGenomeseducationPhylloxeraEcology Evolution Behavior and Systematics030304 developmental biologyObligateHuman GenomeViticulturaCell Biology15. Life on landbiology.organism_classificationBiologicalEffectorsClimate Actionlcsh:Biology (General)13. Climate actionEvolutionary biologyArthropod genomesPhylloxeraAdaptationIntroduced SpeciesInsectAnimal DistributionDevelopmental Biology
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Trends in summer presence of fin whales in the Western Mediterranean Sea Region: new insights from a long-term monitoring program

2020

Background The Mediterranean subpopulation of fin whale Balaenoptera physalus (Linnaeus, 1758) has recently been listed as Vulnerable by the IUCN Red List of threatened species. The species is also listed as species in need of strict protection under the Habitat Directive and is one of the indicators for the assessment of Good Environmental Status under the MSFD. Reference values on population abundance and trends are needed in order to set the threshold values and to assess the conservation status of the population. Methods Yearly summer monitoring using ferries as platform of opportunity was performed since 2008 within the framework of the FLT Med Network. Data were collected along sever…

0106 biological sciencesFin whale010504 meteorology & atmospheric sciencesConservation BiologyPopulationMarine BiologyDistributionAssessment01 natural sciencesMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyMediterranean seabiology.animalIUCN Red ListeducationTransect0105 earth and related environmental scienceseducation.field_of_studyBalaenopterabiologyEcologyWhale010604 marine biology & hydrobiologyGeneral NeuroscienceGeneral Medicinebiology.organism_classificationGeographyBiogeographyMediterranean seaConservation statusPhysical geographyTrendsGeneral Agricultural and Biological SciencesZoologyPeerJ
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Influence of dams on population persistence in Atlantic salmon (Salmo salar)

2016

Barriers to migration can negatively affect population persistence. To explore how dams can influence the viability of a diadromous fish, we developed an empirically based stochastic model to estimate per-capita population growth rate (r) and probability of population decline (Pr(r < 0)). Our simulations incorporated life-history parameters common for many populations of Atlantic salmon (Salmo salar L., 1758), particularly in the southern part of the species range. Additionally, we explored the influence of individuals that reproduce more than once, i.e., “kelts”, on r and Pr(r < 0). For the life-history scenarios examined here, dams are forecast to negatively affect persistence, eve…

0106 biological sciencesFish migrationeducation.field_of_studybiologyEcology010604 marine biology & hydrobiologyPopulationSpecies distributionZoologybiology.organism_classification010603 evolutionary biology01 natural sciencesGene flowPersistence (computer science)Population declinePopulation growthAnimal Science and Zoology14. Life underwaterSalmoeducationEcology Evolution Behavior and SystematicsCanadian Journal of Zoology
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Checklist of gypsophilous vascular flora in Italy

2018

Our understanding of the richness and uniqueness of the flora growing on gypsum substrates in Italy has grown significantly since the 19th century and, even today, new plant species are still being discovered. However, the plants and plant communities, growing on gypsum substrates in Italy, are still a relatively unknown subject. The main aim of this paper was to elaborate a checklist of the Italian gypsophilous flora, to increase knowledge about this peculiar flora and for which conservation efforts need to be addressed. Through a structured group communication process of experts (application of the Delphi technique), a remarkable number of experienced Italian botanists have joined togethe…

0106 biological sciencesFloraEdaphism Gypsophyte Habitats Directive Plant preservationBiodiversity & ConservationPlant SciencePoaceaePlant conservation010603 evolutionary biology01 natural sciencesFloristics & Distributionlcsh:BotanyEndemismEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSEdaphismEcologyEdaphism Gypsophyte Habitats Directive Plant conservationSettore BIO/02 - Botanica SistematicaSouthern Europe and MediterraneanGypsophyteEuphorbiaceaePlant community15. Life on landSpecies InventoriesEcology Evolution Behavior and SystematicChecklistHabitatslcsh:QK1-989Plant preservationEuropeHabitats DirectiveGeographyTaxonAngiospermaeHabitatBiogeographyecosystems & natural spacesSettore BIO/03 - Botanica Ambientale E ApplicataBrassicaceaeSpecies richnessHabitats DirectiveCatalogues and Checklists010606 plant biology & botanyResearch ArticlePhytoKeys
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Dimensions of invasiveness: Links between local abundance, geographic range size, and habitat breadth in Europe's alien and native floras.

2021

Understanding drivers of success for alien species can inform on potential future invasions. Recent conceptual advances highlight that species may achieve invasiveness via performance along at least three distinct dimensions: 1) local abundance, 2) geographic range size, and 3) habitat breadth in naturalized distributions. Associations among these dimensions and the factors that determine success in each have yet to be assessed at large geographic scales. Here, we combine data from over one million vegetation plots covering the extent of Europe and its habitat diversity with databases on species' distributions, traits, and historical origins to provide a comprehensive assessment of invasive…

0106 biological sciencesFloraenemy release[SDE.MCG]Environmental Sciences/Global Changesmedia_common.quotation_subjectEnemy releaseinvasion successforms of raritydistribution–abundance relationshipenemy releaseleaf economic spectrumPlant Ecology and Nature Conservation[SDV.BID]Life Sciences [q-bio]/BiodiversityAlienLeaf economic spectrumdistribution–abundance relationshipinvasion success forms of rarity distribution–abundance relationship enemy release leaf economic spectrum010603 evolutionary biology01 natural sciencesAbundance (ecology)ddc:570invasion success forms of rarity distribution-abundance relationship enemy release leaf economic spectrumforms of rarityForms of rarityInvasion successAlien speciesEcosystemmedia_common[SDV.EE]Life Sciences [q-bio]/Ecology environmentMultidisciplinaryleaf economic spectrumEcologydistribution-abundance relationship; enemy release; forms of rarity; invasion success; leaf economic spectrum010604 marine biology & hydrobiologyVegetation15. Life on landPlantsBiological SciencesDistribution-abundance relationshipDefensieEuropePhylogeography580: Pflanzen (Botanik)GeographyHabitatdistribution-abundance relationshipinvasion successPlantenecologie en Natuurbeheer[SDE.BE]Environmental Sciences/Biodiversity and EcologyIntroduced SpeciesDistribution–Abundance relationshipDiversity (politics)Proceedings of the National Academy of Sciences of the United States of America
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Warming-related shifts in the distribution of two competing coastal wrasses

2016

13 páginas, 5 figuras , 1 tabla, 1 apéndice con tres tablas y una figura

0106 biological sciencesFood ChainRange (biology)[SDE.MCG]Environmental Sciences/Global ChangesCorisThalassoma pavoDistributional shiftsWrasseInterspecific interactionsAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesGlobal WarmingWrassesMediterranean seaAbundance (ecology)Aquatic scienceAnimalsSeawater14. Life underwaterManyGLMDemographyTemperaturesDistributional shiftbiologyEcology010604 marine biology & hydrobiologyGlobal warmingFishesTemperatureGeneral MedicineInterspecific competitionbiology.organism_classificationPollutionPerciformesCoastal waterOceanographyGeographyFish13. Climate actionMediterranean seaCoastal watersInterspecific interactionWarmingEnvironmental Monitoring
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Incorporating Biotic Information in Species Distribution Models: A Coregionalized Approach

2021

In this work, we discuss the use of a methodological approach for modelling spatial relationships among species by means of a Bayesian spatial coregionalized model. Inference and prediction is performed using the integrated nested Laplace approximation methodology to reduce the computational burden. We illustrate the performance of the coregionalized model in species interaction scenarios using both simulated and real data. The simulation demonstrates the better predictive performance of the coregionalized model with respect to the univariate models. The case study focus on the spatial distribution of a prey species, the European anchovy (Engraulis encrasicolus), and one of its predator spe…

0106 biological sciencesGeneral MathematicsSpecies distributionBayesian probabilityspeciescoregionalized modelsBayesian hierarchical models010603 evolutionary biology01 natural sciences010104 statistics & probabilitymodelsEngraulisHakeAnchovyStatisticsComputer Science (miscellaneous)INLAdistributionEuropean anchovyPesqueríasCentro Oceanográfico de Murcia0101 mathematicsEngineering (miscellaneous)SPDEfishspecies interactionbiologymathematicslcsh:MathematicsUnivariateMerluccius merlucciusbiology.organism_classificationlcsh:QA1-939fisheriesEnvironmental sciencepredation
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SHAPE MATTERS: EFFECT OF POINT MUTATIONS ON RNA SECONDARY STRUCTURE

2013

A suitable model to dive into the properties of genotype-phenotype landscapes is the relationship between RNA sequences and their corresponding minimum free energy secondary structures. Relevant issues related to molecular evolvability and robustness to mutations have been studied in this framework. Here, we analyze the one-mutant neighborhood of the predicted secondary structure of 46 different RNAs, including tRNAs, viroids, larger molecules such as Hepatitis-δ virus, and several random sequences. The probability distribution of the effect of point mutations in linear structural motifs of the secondary structure is well fit by Pareto or Lognormal probability distributions functions, indep…

0106 biological sciencesGenetics0303 health sciencesPoint mutationRNARobustness (evolution)Computational biologyBiology010603 evolutionary biology01 natural sciencesNucleic acid secondary structureEvolvability03 medical and health sciencesControl and Systems EngineeringProbability distributionStructural motifRNA secondary structure sequence-structure map mutational effects linear motifsProtein secondary structure030304 developmental biologyAdvances in Complex Systems
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The Recent non-marine ostracods of Tunisia: an updated checklist with remarks on their regional distribution patterns and ecological preferences

2020

Different lines of investigation have recently contributed to increasing the available knowledge about the invertebrates inhabiting inland waters of north Africa, but a comprehensive synopsis on Tunisian Ostracoda is missing to date. An updated checklist of Recent non-marine ostracods from Tunisia and data on their distribution is thus offered here, representing the most extensive survey on this crustacean group ever carried out in inland waters throughout the country. One-hundred-five sites covering various climate zones, from Mediterranean to desert areas, were sampled between 2002 and 2012. Most of the considered water bodies were temporary or ephemeral habitats, but a few permanent site…

0106 biological sciencesGeographyEcologybusiness.industryEcology010607 zoologyDistribution (economics)Aquatic Sciencebusiness010603 evolutionary biology01 natural sciencesChecklistWater Science and TechnologyJournal of Limnology
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

2015

Background The whitefly Bemisia tabaci is an important agricultural pest with global distribution. This phloem-sap feeder harbors a primary symbiont, “Candidatus Portiera aleyrodidarum”, which compensates for the deficient nutritional composition of its food sources, and a variety of secondary symbionts. Interestingly, all of these secondary symbionts are found in co-localization with the primary symbiont within the same bacteriocytes, which should favor the evolution of strong interactions between symbionts. Results In this paper, we analyzed the genome sequences of the primary symbiont Portiera and of the secondary symbiont Hamiltonella in the B. tabaci Mediterranean (MED) species in orde…

0106 biological sciencesHamiltonellaCandidatus Portiera aleyrodidarum[SDV]Life Sciences [q-bio]Molecular Sequence DataWhiteflyPortiera010603 evolutionary biology01 natural sciencesGenomeHemiptera03 medical and health sciencesMetabolic complementationSymbiosisEnterobacteriaceaeBotanyGeneticsAnimalsAmino AcidsSymbiosisIn Situ Hybridization Fluorescence030304 developmental biology2. Zero hungerGenetics0303 health sciencesEndosymbiontGenomebiologyfungifood and beveragesHigh-Throughput Nucleotide SequencingDNASequence Analysis DNAVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationEnterobacteriaceaeHemipteraWhiteflyComplementationHalomonadaceaeGlobal distribution[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Genome BacterialMetabolic Networks and PathwaysBiotechnologyResearch ArticleBMC Genomics
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