Search results for "electron density"
showing 10 items of 428 documents
Polarized Fourier transform infrared microscopy as a tool for structural analysis of adsorbates in molecular sieves
1992
Using FTIR microscopy with polarized IR radiation on silicalite I single crystals fully loaded with p-xylene, the existence of an ordered adsorbate could be proven for the first time by IR spectroscopy. By analyzing the polarized absorption bands the orientation of the p-xylene molecules relative to the host structure could be determined. The results agree well with structural data obtained from X-ray diffraction experiments. These first results suggest that polarized IR microscopy could develop into a powerful tool for the analysis of adsorbate structures, assisting in complete structure resolution by diffraction techniques
Time multiplexing super-resolved imaging without a priori knowledge of the spatial distribution of the encoding structured illumination
2021
Time multiplexing is a super-resolution technique that sacrifices time to overcome the resolution reduction obtained because of diffraction. There are many super resolution methods based on time multiplexing, but all of them require a priori knowledge of the time changing encoding mask, which is projected on the object and used to encode and decode the high-resolution information. In this paper, we present a time multiplexing technique that does not require the a priori knowledge on the projected encoding mask. First, the theoretical concept of the technique is demonstrated; then, numerical simulations and experimental results are presented.
Revisiting the charge density analysis of 2,5-dichloro-1,4-benzoquinone at 20 K
2017
A high-resolution X-ray diffraction measurement of 2,5-dichloro-1,4-benzoquinone (DCBQ) at 20 K was carried out. The experimental charge density was modeled using the Hansen–Coppens multipolar expansion and the topology of the electron density was analyzed in terms of the quantum theory of atoms in molecules (QTAIM). Two different multipole models, predominantly differentiated by the treatment of the chlorine atom, were obtained. The experimental results have been compared to theoretical results in the form of a multipolar refinement against theoretical structure factors and through direct topological analysis of the electron density obtained from the optimized periodic wavefunction. The si…
Maximum entropy method : an unconventional approach to explore observables related to the electron density in phengites
2009
The maximum entropy method (MEM) is used here to get an insight into the electron density [rho(r)] of phengites 2M (1) and 3T, paying special attention to the M1-formally empty site and charge distribution. Room temperature single crystal X-ray diffraction data have been used as experimental input for MEM. The results obtained by MEM have been compared with those from conventional structure refinement which, in turn, has provided the prior-electron density to start the entropy maximization process. MEM reveals a comparatively non-committal approach, able to produce information related to the M1-site fractional occupancy, and yields results consistent with those from the difference Fourier s…
Electric properties of KTiOPO4and NaTiOPO4from temperature-dependent X-ray diffraction
1999
Single crystals of KTiOPO4(KTP) and NaTiOPO4(NaTP) show pronounced pyroelectric behaviour. In order to determine the origin of this property on an atomic scale, X-ray diffraction measurements have been carried out at several temperatures between 100 and 600 K. Modelling of the electron density and the evolution of the structure as a function of temperature has enabled the determination of values for the spontaneous polarization of the compounds and the pyroelectric coefficient of KTP, principally due to the alkaline-ion displacements with a value of 2.0 nC cm−2 K−1. Structure modifications, compared with NaTiOPO4, and the calculation of the electrostatic potential explain the anisotropic be…
Synchrotron X-ray Diffraction and Reflection Studies of a Polymacromonomer Monolayer at the Air−Water Interface: Transition from Aligned Single Mole…
2004
Monolayers of polymacromonomers with poly(vinyl)pyridine side chains of different lengths, polyPVP20.8 and polyPVP46.7, are studied at the air/water interface. Combination of reflection data and diffraction peaks allows the establishment of a structural model. In the expanded phase at pressures below approximately 15 mN/m, the side chains are adsorbed to the air/water interface, causing polymer backbone stretching and alignment of the single molecules. The in-plane peaks are due to the lateral electron density variation above and below the adsorption layer. The diameter of the flattened cylindrical molecules corresponds to twice the contour length of the side chains (25 and 12.5 nm, respect…
On the application of an experimental multipolar pseudo-atom library for accurate refinement of small-molecule and protein crystal structures
2007
International audience; With an increasing number of biomacromolecular crystal structures being measured to ultra-high resolution, it has become possible to extend to large systems experimental charge-density methods that are usually applied to small molecules. A library has been built of average multipole populations describing the electron density of chemical groups in all 20 amino acids found in proteins. The library uses the Hansen & Coppens multipolar pseudo-atom model to derive molecular electron density and electrostatic potential distributions. The library values are obtained from several small peptide or amino acid crystal structures refined against ultra-high-resolution X-ray diff…
About the reliability of the Maximum Entropy Method in reconstructing electron density: the case of MgO
2006
Abstract The reliability of the Maximum Entropy Method (MEM) to reconstruct finite temperature electron density (ED) is here discussed, investigating the case of periclase (MgO). A theoretical electron density has been generated by quantum mechanic calculations and folded with a function simulating atomic thermal motion, in order to produce a reference errorless ED [ρ(r)REF]. The Fourier coefficients of ρ(r)REF have been calculated, and used as “observed” diffraction intensities to reconstruct via MEM the original ED. The electron density attained by MEM [ρ(r)MEM] and ρ(r)REF have been compared with each other (pixel-by-pixel and critical points) to assess the ability of MEM to retrieve EDs…
Synchrotron diffraction study of the isothermal oxidation of uranium dioxide at 250°C
2003
ABSTRACTThe structural evolution of UO2 during its oxidation to U3O8 at 250°C in air was studied by in-situ synchrotron X-ray diffraction on the D2AM-CRG beamline at ESRF. The aim of this study is to determine the phases that are likely to appear during the long-term storage of spent nuclear fuel. Our results are in disagreement with the literature in which the existence of an intermediate cubic phase is not reported. Instead, an α-U3O7 tetragonal phase (c/a < 1) was mentioned but not definitively observed. These previous interpretations may have been the result of poor instrumental resolution.
Super-resolved imaging with randomly distributed, time- and size-varied particles
2009
In this paper we present a super-resolved approach aimed at overcoming the diffraction limit in imaging systems. It is based on place randomly and time-varied particles having different sizes on the top of the sample. By considering particle sizes smaller than the object's minimum detail that an imaging system can resolve, it is possible to recover a high resolution image from a set of low resolution images while before capturing each image we produce a randomly modified distribution of the particles by vibrating the sample. The simulation process as well as experimental results validates the proposed approach that includes effectively decreasing the F number of the imaging system while bei…