Search results for "enterobacteria"

showing 10 items of 149 documents

Mealybugs nested endosymbiosis: going into the 'matryoshka' system in Planococcus citri in depth.

2013

Abstract Background In all branches of life there are plenty of symbiotic associations. Insects are particularly well suited to establishing intracellular symbiosis with bacteria, providing them with metabolic capabilities they lack. Essential primary endosymbionts can coexist with facultative secondary symbionts which can, eventually, establish metabolic complementation with the primary endosymbiont, becoming a co-primary. Usually, both endosymbionts maintain their cellular identity. An exception is the endosymbiosis found in mealybugs of the subfamily Pseudoccinae, such as Planococcus citri, with Moranella endobia located inside Tremblaya princeps. Results We report the genome sequencing …

Microbiology (medical)DNA BacterialSubfamilyMoranella endobiaMolecular Sequence DataMicrobiologyGenomeDNA sequencingBacterial geneticsMicrobiologyHemipteraEnterobacteriaceaePlanococcus citriNested endosymbiosisAnimalsSymbiosisTremblaya princepsOrganismComparative genomicsEndosymbiosisbiologyBetaproteobacteriaSequence Analysis DNAbiology.organism_classificationPlanococcus citriEvolutionary biologyfunctional complementationGenome BacterialResearch ArticleBMC microbiology
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Use of pulsed-field gel electrophoresis for comparison of similar but distinguishable isolates of Shigella sonnei collected in Ireland and Italy

2006

ABSTRACT Comparison of pulsed-field gel electrophoresis patterns (generated with XbaI and BlnI) of Shigella sonnei isolates from Ireland and Italy suggests that two possibly distantly related lineages are present in both countries. Smaller, more closely related groups, including isolates from Ireland and Italy, were also noted. These groups raise the possibility that the dissemination of clonal groups of S. sonnei may have occurred in recent years.

Microbiology (medical)Gel electrophoresisbiologyEpidemiologysalmonellaShigella sonneibiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycosesEnterobacteriaceaePulsed field electrophoresisMicrobiologyElectrophoresis Gel Pulsed-FielddiversityItalyGenotypePulsed-field gel electrophoresisbacteriaHumansShigella sonneiIrelandBacteriaPhylogenyDysentery Bacillary
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Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov

2019

AbstractKlebsiella oxytocacauses opportunistic human infections and post-antibiotic haemorrhagic diarrhoea. ThisEnterobacteriaceaespecies is genetically heterogeneous and is currently subdivided into seven phylogroups (Ko1 to Ko4, Ko6 to Ko8). Here we investigated the taxonomic status of phylogroups Ko3 and Ko4. Genomic sequence-based phylogenetic analyses demonstrate that Ko3 and Ko4 formed well-defined sequence clusters related to, but distinct from,Klebsiella michiganensis(Ko1),Klebsiella oxytoca(Ko2),K. huaxiensis(Ko8) andK. grimontii(Ko6). The average nucleotide identity of Ko3 and Ko4 were 90.7% withK. huaxiensisand 95.5% withK. grimontii, respectively. In addition, three strains ofK.…

Microbiology (medical)KlebsiellaEuropean Nucleotide Archivelcsh:QR1-502[SDV.BID]Life Sciences [q-bio]/BiodiversityphylogenyMALDI-ToF mass spectrometryMicrobiologylcsh:MicrobiologyMicrobiology03 medical and health scienceschemistry.chemical_compoundtaxonomyblaOXYPhylogenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyFeces1183 Plant biology microbiology virologyOriginal Research030304 developmental biologyHuman feces0303 health sciencesbiologyPhylogenetic tree030306 microbiologyKlebsiella oxytocaSimmons' citrate agarbiology.organism_classification16S ribosomal RNArpoBEnterobacteriaceaegenome sequencingchemistrybla OXYTaxonomy (biology)[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologieKlebsiella oxytoca complex
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Drug Resistance in Salmonella enterica ser. Typhimurium Bloodstream Infection, Malawi

2014

To the Editor: Salmonella enterica serotype Typhimurium is one of the most common causes of bloodstream infection in sub-Saharan Africa (1). Among adults, the principal risk factor for invasive nontyphoidal Salmonella (iNTS) disease is advanced HIV infection; up to 44% of HIV-infected patients experience bacteremic recurrence through recrudescence of the original infection (2,3). Epidemics of iNTS disease in sub-Saharan Africa have been associated with a novel genotype of S. enterica ser. Typhimurium of multilocus sequence type (ST) 313 that is rarely seen outside the region and is associated with multidrug resistance (MDR) to chloramphenicol, cotrimoxazole, and ampicillin (4,5). As a conse…

Microbiology (medical)MalawiLetterEpidemiologyDrug Resistance in Salmonella enterica ser. Typhimurium Bloodstream Infection Malawiwh_120lcsh:MedicineVirulenceDrug resistancewc_269fluoroquine resistancelcsh:Infectious and parasitic diseasesMicrobiologyqw_45PlasmidAntibiotic resistanceSalmonellalcsh:RC109-216antimicrobial resistanceLetters to the Editorbacteriawb_330biologyAccession number (library science)lcsh:RSalmonella entericaHIVbiology.organism_classificationVirologyEnterobacteriaceaeR13. Good healthMultiple drug resistanceInfectious DiseasesESBLSalmonella entericaAfricaserotype TyphimuriumHuman medicineKeywords: Salmonella
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Characteristics of Escherichia coli strains belonging to enteropathogenic E. coli serogroups isolated in Italy from children with diarrhea.

1996

Fifty-five Escherichia coli strains belonging to enteropathogenic E. coli (EPEC) serogroups were examined for phenotypic and genetic factors associated with virulence. The strains were isolated in Italy from children with diarrhea and identified as EPEC by clinical laboratories using commercially available antisera. O:H serotyping showed that 35 strains (27 of O26, O111, and O128 serogroups) belonged to 11 serotypes considered to be classical EPEC O:H serotypes. The other 20 isolates were classified as 15 nonclassical EPEC O:H serotypes. All the potential EPEC virulence factors associated with bacterial adhesion (localized adherence, fluorescentactin staining test positivity, presence of th…

Microbiology (medical)SerotypeDiarrheaVirulencemedicine.disease_causeMicrobiologyPlasmidGenotypemedicineEscherichia coliHumansSerotypingAdhesins BacterialChildEscherichia colibiologyVirulenceHybridization probeEscherichia coli Proteinsbiology.organism_classificationbacterial infections and mycosesEnterobacteriaceaeVirologyBacterial adhesinbacteriaCarrier ProteinsBacterial Outer Membrane ProteinsPlasmidsResearch ArticleJournal of clinical microbiology
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Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital

2010

Dumpis U, Iversen A, Balode A, Saule M, Miklasevics E, Giske CG. Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital. APMIS 2010; 118: 713–6. Previous studies on the epidemiology of extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae in Latvia are lacking. ESBL-producing Klebsiella pneumoniae (n = 32) were subjected to pulsed-field gel electrophoresis (PFGE) and selected isolates to multi-locus sequence typing (MLST). Species identification and susceptibility testing were performed using VITEK2, and sequencing of blaCTX-M was performed in selected isolates. PFGE revealed one major clone (n = 23), with most of the isolates de…

Microbiology (medical)biologyKlebsiella pneumoniaemedicine.medical_treatmentOutbreakGeneral Medicinebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationVirologyEnterobacteriaceaePathology and Forensic MedicineMicrobiologychemistry.chemical_compoundchemistryPulsed-field gel electrophoresisBeta-lactamasemedicineImmunology and AllergyMultilocus sequence typingTypingErtapenemAPMIS
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Profiling of Protein Degraders in Cultures of Human Gut Microbiota

2019

Unabsorbed proteins reach the colon and are fermented by the microbiota, yielding a variety of harmful metabolites. In the present study, a 16S rRNA gene survey identified the bacterial taxa flourishing in 11 batch fermentations with proteins and peptones as the sole fermentable substrates, inoculated with the feces of six healthy adults. Organic acids, ammonia, and indole resulting from protein breakdown and fermentation accumulated in all of the cultures. Analysis of differential abundances among time-points identified Enterobacteriaceae, Burkholderiaceae, and Desulfovibrionaceae (including Esherichia-Shigella, Sutterella, Parasutterella, and Bilophila) among the bacteria that especially …

Microbiology (medical)proteolysisFirmicuteslcsh:QR1-502gut microbiota proteolysis metagenomics enrichment culture EnterobacteriaceaeSutterellaMicrobiologylcsh:MicrobiologyMicrobiology03 medical and health sciencesEnterobacteriaceaeenrichment culture030304 developmental biologyOriginal Research0303 health sciencesmetagenomicsbiologygut microbiota030306 microbiologyRuminococcusLachnospiraceaeBacteroidetesbiology.organism_classificationRoseburiaBacteroidesRuminococcaceaeFrontiers in Microbiology
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Rapid and specific detection of F17-related pilin and adhesin genes in diarrheic and septicemic Escherichia coli strains by multiplex PCR

1996

The F17-related adhesins are prevalent in Escherichia coli strains isolated from calves with diarrhea or septicemia and from lambs with nephropathy. The F17 family includes the F17a, F17b, F17c, and F111 fimbriae produced by bovine E. coli strains and the G agglutinin produced by human uropathogenic E. coli strains. An easy and inexpensive multiplex PCR method was developed to detect all the F17-related fimbriae and to identify four subtypes of structural subunit genes and two distinct subfamilies of adhesin genes by only two runs of amplification. A strict correlation was observed between the phenotypic assays and the multiplex PCR method when 166 pathogenic E. coli strains isolated from i…

OperonFimbriaBacteremiamedicine.disease_causePolymerase Chain ReactionPilusFimbriae ProteinsEscherichia coli InfectionsComputingMilieux_MISCELLANEOUS2. Zero hunger0303 health sciencesbiologyEnterobacteriaceae3. Good healthPhenotype[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMultigene FamilyFimbriae ProteinsBacterial Outer Membrane ProteinsResearch ArticleDiarrheaMicrobiology (medical)Gene Transfer HorizontalCattle DiseasesSheep DiseasesMicrobiology03 medical and health sciencesSpecies SpecificityOperonEscherichia colimedicineAnimalsHumansAdhesins BacterialEscherichia coli[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyDNA Primers030304 developmental biologyBacteriological TechniquesSheepBase Sequence030306 microbiologyTOXINE CNF2biochemical phenomena metabolism and nutritionbiology.organism_classificationMolecular biologyFIMBRIAE F17Bacterial adhesinGenes BacterialPilinbiology.proteinbacteriaCattle
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Confocal laser endomicroscopy is a new imaging modality for recognition of intramucosal bacteria in inflammatory bowel disease in vivo.

2011

International audience; BACKGROUND AND OBJECTIVES: Interaction of bacteria with the immune system within the intestinal mucosa plays a key role in the pathogenesis of inflammatory bowel disease (IBD). The aim of the current study was to develop a fluorescein-aided confocal laser endomicroscopy (CLE) method to visualise intramucosal enteric bacteria in vivo and to determine the involved mucosal area in the colon and ileum in patients with ulcerative colitis (UC) and Crohn's disease (CD). METHODS: Initially, E coli strains expressing enhanced green fluorescent protein (pEGFP) were endomicroscopically imaged in mice. In addition, ex vivo and in vivo imaging of fluorescent human enteric bacteri…

PathologyMESH : Escherichia colifluoresceinMESH : Retrospective StudiesColorectal cancerMESH : Prospective StudiesGastroenterologyInflammatory bowel disease[ SDV.CAN ] Life Sciences [q-bio]/Cancer0302 clinical medicineIntestinal mucosaMESH: Microscopy ConfocalMESH: AnimalsMESH : Colonoscopy1506MESH: In Situ Hybridization Fluorescenceintramucosal bacteria0303 health sciencesCrohn's diseaseMESH: Escherichia coliGastroenterologyMESH : EnterobacteriaceaeMESH : Colitis UlcerativeUlcerative colitisenteric bacterial microflora3. Good healthMESH : In Situ Hybridization FluorescenceCrohn's diseaseMESH: Colonoscopyconfocal laser endomicroscopyMESH: Intestinal MucosaMESH : Inflammatory Bowel Diseases030211 gastroenterology & hepatologymedicine.medical_specialtyMESH : MaleMESH: Colitis Ulcerative[SDV.CAN]Life Sciences [q-bio]/CancerMESH : Mice Inbred C57BLBiologyMESH : Intestinal MucosaMESH : Crohn Disease03 medical and health sciencesMESH: EnterobacteriaceaeFISHfluorescence endoscopyIn vivoMESH: Mice Inbred C57BLInternal medicineMESH : MicemedicineEndomicroscopyMESH: ColonMESH : Microscopy ConfocalMESH: Miceulcerative colitis030304 developmental biologyMESH : IleumMESH: HumansBacteriaMESH: Crohn Diseaseinfectious colitisMESH : HumansEndoscopyMESH: Retrospective Studiesmedicine.diseaseMESH: Inflammatory Bowel DiseasesMESH : ColonMESH: MaleMESH: Prospective StudiesMESH: IleumMESH : AnimalsEx vivo
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Surface Components of Escherichia coli That Mediate Resistance to the Bactericidal Activities of Serum and Phagocytes

1985

Microorganisms that enter the animal body, either actively or passively, encounter a battery of nonspecific and specific chemical and cellular defenses whose role is to inactivate and eliminate foreign materials. Successful pathogens have the ability to avoid, resist, or inactivate these defenses for at least the period necessary for initiation of the disease process.

PhagocytebiologyPhagocytosisBlood Bactericidal Activitymedicine.disease_causebiology.organism_classificationEnterobacteriaceaeBacterial geneticsMicrobiologymedicine.anatomical_structuremedicineAnimal bodyEscherichia coliBacteria
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